RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
MALAT1-208ENST00000616527 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.67
MALAT1-208ENST00000616527 IGLV9-49A0A0B4J1Y8 123 aa4.65□□□□□ -1.67
MALAT1-208ENST00000616527 MOBPQ13875 183 aa4.65□□□□□ -1.67
MALAT1-208ENST00000616527 Q5XG85 94 aa4.65□□□□□ -1.67
MALAT1-208ENST00000616527 Q8N9L7 120 aa4.65□□□□□ -1.67
MALAT1-208ENST00000616527 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
MALAT1-208ENST00000616527 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
MALAT1-208ENST00000616527 K7EQZ3 153 aa4.64□□□□□ -1.67
MALAT1-208ENST00000616527 KLKP1Q107X0 134 aa4.64□□□□□ -1.67
MALAT1-208ENST00000616527 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
MALAT1-208ENST00000616527 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
MALAT1-208ENST00000616527 Q96NJ1 140 aa4.63□□□□□ -1.67
MALAT1-208ENST00000616527 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
MALAT1-208ENST00000616527 NDUFC1O43677 76 aa4.62□□□□□ -1.67
MALAT1-208ENST00000616527 NDUFB1O75438 58 aa4.62□□□□□ -1.67
MALAT1-208ENST00000616527 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
MALAT1-208ENST00000616527 SPINK6Q6UWN8 80 aa4.61□□□□□ -1.67
MALAT1-208ENST00000616527 TMEM258P61165 79 aa4.6□□□□□ -1.67
MALAT1-208ENST00000616527 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
MALAT1-208ENST00000616527 PKD1P98161 4303 aa4.6□□□□□ -1.67
MALAT1-208ENST00000616527 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
MALAT1-208ENST00000616527 C20orf197Q8N268 126 aa4.59□□□□□ -1.67
MALAT1-208ENST00000616527 SACSQ9NZJ4 4579 aa4.59□□□□□ -1.68
MALAT1-208ENST00000616527 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
MALAT1-208ENST00000616527 KRTAP13-2Q52LG2 175 aa4.58□□□□□ -1.68
MALAT1-208ENST00000616527 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
MALAT1-208ENST00000616527 A0A087X002 238 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 A0A0U1RQV1 116 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 A0A1B0GVX0 72 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 H3BPC8 53 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
MALAT1-208ENST00000616527 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
MALAT1-208ENST00000616527 H7BZZ5 65 aa4.56□□□□□ -1.68
MALAT1-208ENST00000616527 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
MALAT1-208ENST00000616527 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 hDV103S1A0JD37 113 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
MALAT1-208ENST00000616527 RPS28P62857 69 aaKnown RBP4.55□□□□□ -1.68
MALAT1-208ENST00000616527 HRCT1Q6UXD1 115 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 LIMD2Q9BT23 127 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 C8orf17Q9NRJ1 99 aa4.55□□□□□ -1.68
MALAT1-208ENST00000616527 C8orf87E5RJ46 101 aa4.54□□□□□ -1.68
MALAT1-208ENST00000616527 SPINK1P00995 79 aa4.54□□□□□ -1.68
MALAT1-208ENST00000616527 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
MALAT1-208ENST00000616527 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
MALAT1-208ENST00000616527 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
MALAT1-208ENST00000616527 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
MALAT1-208ENST00000616527 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
MALAT1-208ENST00000616527 MP68P56378 58 aa4.52□□□□□ -1.69
MALAT1-208ENST00000616527 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
MALAT1-208ENST00000616527 DYNC1H1Q14204 4646 aaKnown RBP4.52□□□□□ -1.69
MALAT1-208ENST00000616527 C1orf195Q5TG92 126 aa4.51□□□□□ -1.69
MALAT1-208ENST00000616527 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
MALAT1-208ENST00000616527 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
MALAT1-208ENST00000616527 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
MALAT1-208ENST00000616527 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
MALAT1-208ENST00000616527 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
MALAT1-208ENST00000616527 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
MALAT1-208ENST00000616527 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
MALAT1-208ENST00000616527 PKHD1P08F94 4074 aa4.47□□□□□ -1.69
MALAT1-208ENST00000616527 H0Y9P7 68 aa4.47□□□□□ -1.69
MALAT1-208ENST00000616527 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
MALAT1-208ENST00000616527 RYR2Q92736 4967 aa4.46□□□□□ -1.7
MALAT1-208ENST00000616527 SMR3BP02814 79 aaPredicted RBP4.46□□□□□ -1.7
MALAT1-208ENST00000616527 LINC00313P59037 77 aa4.46□□□□□ -1.7
MALAT1-208ENST00000616527 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
MALAT1-208ENST00000616527 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
MALAT1-208ENST00000616527 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
MALAT1-208ENST00000616527 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
MALAT1-208ENST00000616527 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
MALAT1-208ENST00000616527 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
MALAT1-208ENST00000616527 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
MALAT1-208ENST00000616527 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
MALAT1-208ENST00000616527 C1orf64Q8NEQ6 169 aa4.43□□□□□ -1.7
MALAT1-208ENST00000616527 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
MALAT1-208ENST00000616527 KRTAP16-1A8MUX0 517 aa4.42□□□□□ -1.7
MALAT1-208ENST00000616527 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
MALAT1-208ENST00000616527 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.7
MALAT1-208ENST00000616527 NDUFS5O43920 106 aa4.4□□□□□ -1.71
MALAT1-208ENST00000616527 KRTAP10-8P60410 259 aa4.39□□□□□ -1.71
MALAT1-208ENST00000616527 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
MALAT1-208ENST00000616527 Q5VSD8 79 aa4.38□□□□□ -1.71
MALAT1-208ENST00000616527 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
MALAT1-208ENST00000616527 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
MALAT1-208ENST00000616527 OXTP01178 125 aa4.36□□□□□ -1.71
MALAT1-208ENST00000616527 Q5W150 140 aa4.36□□□□□ -1.71
MALAT1-208ENST00000616527 FAT1Q14517 4588 aa4.36□□□□□ -1.71
MALAT1-208ENST00000616527 PKHD1L1Q86WI1 4243 aa4.35□□□□□ -1.71
MALAT1-208ENST00000616527 MT3P25713 68 aa4.35□□□□□ -1.71
MALAT1-208ENST00000616527 FP248Q71RG6 208 aaPredicted RBP4.34□□□□□ -1.71
MALAT1-208ENST00000616527 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
MALAT1-208ENST00000616527 A8MUU9 505 aa4.33□□□□□ -1.72
MALAT1-208ENST00000616527 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
MALAT1-208ENST00000616527 HSPG2P98160 4391 aa4.3□□□□□ -1.72
MALAT1-208ENST00000616527 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms