RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
PPP4R3B-206ENST00000616407 FP248Q71RG6 208 aaPredicted RBP7.81□□□□□ -1.16
PPP4R3B-206ENST00000616407 Q5XG85 94 aa7.8□□□□□ -1.16
PPP4R3B-206ENST00000616407 TGP01266 2768 aa7.8□□□□□ -1.16
PPP4R3B-206ENST00000616407 A0A087X002 238 aa7.79□□□□□ -1.16
PPP4R3B-206ENST00000616407 K7ERS5 55 aa7.78□□□□□ -1.16
PPP4R3B-206ENST00000616407 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
PPP4R3B-206ENST00000616407 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
PPP4R3B-206ENST00000616407 LCE6AA0A183 80 aa7.75□□□□□ -1.17
PPP4R3B-206ENST00000616407 HRES1P13985 223 aa7.75□□□□□ -1.17
PPP4R3B-206ENST00000616407 NOTCH2NLQ7Z3S9 236 aa7.74□□□□□ -1.17
PPP4R3B-206ENST00000616407 Q1T7F1 81 aa7.73□□□□□ -1.17
PPP4R3B-206ENST00000616407 Q8N1X5 172 aa7.73□□□□□ -1.17
PPP4R3B-206ENST00000616407 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
PPP4R3B-206ENST00000616407 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
PPP4R3B-206ENST00000616407 Q5W150 140 aa7.7□□□□□ -1.18
PPP4R3B-206ENST00000616407 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
PPP4R3B-206ENST00000616407 UQCR11O14957 56 aa7.63□□□□□ -1.19
PPP4R3B-206ENST00000616407 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
PPP4R3B-206ENST00000616407 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
PPP4R3B-206ENST00000616407 MIR22HGQ0VDD5 57 aa7.57□□□□□ -1.2
PPP4R3B-206ENST00000616407 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
PPP4R3B-206ENST00000616407 FLG2Q5D862 2391 aaPredicted RBP7.55□□□□□ -1.2
PPP4R3B-206ENST00000616407 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
PPP4R3B-206ENST00000616407 J3QL48 77 aa7.55□□□□□ -1.2
PPP4R3B-206ENST00000616407 Q5VV11 94 aa7.55□□□□□ -1.2
PPP4R3B-206ENST00000616407 Q5VSD8 79 aa7.54□□□□□ -1.2
PPP4R3B-206ENST00000616407 Q6ZSA8 131 aa7.53□□□□□ -1.2
PPP4R3B-206ENST00000616407 Q75L30 129 aa7.53□□□□□ -1.2
PPP4R3B-206ENST00000616407 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
PPP4R3B-206ENST00000616407 SPINK7P58062 85 aa7.51□□□□□ -1.21
PPP4R3B-206ENST00000616407 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
PPP4R3B-206ENST00000616407 SRRM2Q9UQ35 2752 aaKnown RBP7.47□□□□□ -1.21
PPP4R3B-206ENST00000616407 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
PPP4R3B-206ENST00000616407 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
PPP4R3B-206ENST00000616407 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
PPP4R3B-206ENST00000616407 MEGF8Q7Z7M0 2845 aa7.39□□□□□ -1.23
PPP4R3B-206ENST00000616407 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
PPP4R3B-206ENST00000616407 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
PPP4R3B-206ENST00000616407 A0A1B0GU33 70 aa7.35□□□□□ -1.23
PPP4R3B-206ENST00000616407 A0A0D9SG42 100 aa7.32□□□□□ -1.24
PPP4R3B-206ENST00000616407 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
PPP4R3B-206ENST00000616407 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
PPP4R3B-206ENST00000616407 LCA10Q71F78 164 aa7.29□□□□□ -1.24
PPP4R3B-206ENST00000616407 S4R3F8 94 aa7.24□□□□□ -1.25
PPP4R3B-206ENST00000616407 A8MU10 97 aa7.24□□□□□ -1.25
PPP4R3B-206ENST00000616407 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
PPP4R3B-206ENST00000616407 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.26
PPP4R3B-206ENST00000616407 LINC01554Q52M75 96 aa7.21□□□□□ -1.26
PPP4R3B-206ENST00000616407 A8MUU9 505 aa7.2□□□□□ -1.26
PPP4R3B-206ENST00000616407 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
PPP4R3B-206ENST00000616407 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
PPP4R3B-206ENST00000616407 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
PPP4R3B-206ENST00000616407 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
PPP4R3B-206ENST00000616407 PRAC1Q96KF2 57 aa7.15□□□□□ -1.26
PPP4R3B-206ENST00000616407 A0A1B0GVY2 172 aa7.13□□□□□ -1.27
PPP4R3B-206ENST00000616407 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
PPP4R3B-206ENST00000616407 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
PPP4R3B-206ENST00000616407 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
PPP4R3B-206ENST00000616407 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
PPP4R3B-206ENST00000616407 KRTAP13-3Q3SY46 172 aa7.11□□□□□ -1.27
PPP4R3B-206ENST00000616407 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
PPP4R3B-206ENST00000616407 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
PPP4R3B-206ENST00000616407 A6NN06 94 aa7.02□□□□□ -1.29
PPP4R3B-206ENST00000616407 XP32Q5T750 250 aa7.01□□□□□ -1.29
PPP4R3B-206ENST00000616407 H3BS24 57 aa7□□□□□ -1.29
PPP4R3B-206ENST00000616407 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
PPP4R3B-206ENST00000616407 PLECQ15149 4684 aaKnown RBP6.99□□□□□ -1.29
PPP4R3B-206ENST00000616407 R4GN34 69 aa6.98□□□□□ -1.29
PPP4R3B-206ENST00000616407 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
PPP4R3B-206ENST00000616407 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
PPP4R3B-206ENST00000616407 M0QZ58 72 aa6.91□□□□□ -1.3
PPP4R3B-206ENST00000616407 M0R2T5 61 aa6.9□□□□□ -1.31
PPP4R3B-206ENST00000616407 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
PPP4R3B-206ENST00000616407 DNHD1Q96M86 4753 aa6.87□□□□□ -1.31
PPP4R3B-206ENST00000616407 ROMO1P60602 79 aa6.86□□□□□ -1.31
PPP4R3B-206ENST00000616407 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
PPP4R3B-206ENST00000616407 ANK2Q01484 3957 aa6.85□□□□□ -1.31
PPP4R3B-206ENST00000616407 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
PPP4R3B-206ENST00000616407 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
PPP4R3B-206ENST00000616407 DNAH11Q96DT5 4516 aa6.79□□□□□ -1.32
PPP4R3B-206ENST00000616407 H0YAA0 97 aa6.78□□□□□ -1.32
PPP4R3B-206ENST00000616407 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
PPP4R3B-206ENST00000616407 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.33
PPP4R3B-206ENST00000616407 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
PPP4R3B-206ENST00000616407 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
PPP4R3B-206ENST00000616407 DNAH3Q8TD57 4116 aa6.72□□□□□ -1.33
PPP4R3B-206ENST00000616407 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.33
PPP4R3B-206ENST00000616407 CMYA5Q8N3K9 4069 aa6.69□□□□□ -1.34
PPP4R3B-206ENST00000616407 P0C880 135 aa6.67□□□□□ -1.34
PPP4R3B-206ENST00000616407 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
PPP4R3B-206ENST00000616407 DNAH17Q9UFH2 4485 aa6.67□□□□□ -1.34
PPP4R3B-206ENST00000616407 KMT2AQ03164 3969 aa6.63□□□□□ -1.35
PPP4R3B-206ENST00000616407 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
PPP4R3B-206ENST00000616407 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
PPP4R3B-206ENST00000616407 LYSTQ99698 3801 aa6.61□□□□□ -1.35
PPP4R3B-206ENST00000616407 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
PPP4R3B-206ENST00000616407 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
PPP4R3B-206ENST00000616407 FAT1Q14517 4588 aa6.54□□□□□ -1.36
PPP4R3B-206ENST00000616407 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms