RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 BPY2O14599 106 aa10.02□□□□□ -0.81
TRAPPC3-209ENST00000616395 A0A087WSZ3 146 aa10.01□□□□□ -0.81
TRAPPC3-209ENST00000616395 IGKV3D-7A0A0C4DH55 119 aa10.01□□□□□ -0.81
TRAPPC3-209ENST00000616395 CD164Q04900 197 aa10.01□□□□□ -0.81
TRAPPC3-209ENST00000616395 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
TRAPPC3-209ENST00000616395 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
TRAPPC3-209ENST00000616395 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
TRAPPC3-209ENST00000616395 J3KT08 172 aa9.95□□□□□ -0.82
TRAPPC3-209ENST00000616395 A0A0G2JQZ4 141 aa9.93□□□□□ -0.82
TRAPPC3-209ENST00000616395 LCE2CQ5TA81 110 aa9.93□□□□□ -0.82
TRAPPC3-209ENST00000616395 KRTAP9-7A8MTY7 169 aa9.91□□□□□ -0.82
TRAPPC3-209ENST00000616395 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
TRAPPC3-209ENST00000616395 HRCT1Q6UXD1 115 aa9.91□□□□□ -0.82
TRAPPC3-209ENST00000616395 LIMD2Q9BT23 127 aa9.9□□□□□ -0.82
TRAPPC3-209ENST00000616395 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
TRAPPC3-209ENST00000616395 NDUFB1O75438 58 aa9.88□□□□□ -0.83
TRAPPC3-209ENST00000616395 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
TRAPPC3-209ENST00000616395 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC3-209ENST00000616395 FAM236AA0A1B0GUQ0 79 aa9.85□□□□□ -0.83
TRAPPC3-209ENST00000616395 FAM236BA0A1B0GV22 79 aa9.85□□□□□ -0.83
TRAPPC3-209ENST00000616395 MT1HP80294 61 aa9.85□□□□□ -0.83
TRAPPC3-209ENST00000616395 ATOX1O00244 68 aa9.83□□□□□ -0.84
TRAPPC3-209ENST00000616395 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC3-209ENST00000616395 SPINK1P00995 79 aa9.82□□□□□ -0.84
TRAPPC3-209ENST00000616395 KRTAP19-2Q3LHN2 52 aa9.82□□□□□ -0.84
TRAPPC3-209ENST00000616395 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
TRAPPC3-209ENST00000616395 IGKV4-1P06312 121 aa9.81□□□□□ -0.84
TRAPPC3-209ENST00000616395 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC3-209ENST00000616395 Q5XG85 94 aa9.81□□□□□ -0.84
TRAPPC3-209ENST00000616395 SMIM20Q8N5G0 67 aa9.81□□□□□ -0.84
TRAPPC3-209ENST00000616395 ANAPC13Q9BS18 74 aa9.81□□□□□ -0.84
TRAPPC3-209ENST00000616395 A8MWP4 228 aa9.8□□□□□ -0.84
TRAPPC3-209ENST00000616395 A0A087WVE0 104 aa9.79□□□□□ -0.84
TRAPPC3-209ENST00000616395 PCP4P48539 62 aa9.79□□□□□ -0.84
TRAPPC3-209ENST00000616395 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
TRAPPC3-209ENST00000616395 DSCR10P59022 87 aa9.78□□□□□ -0.84
TRAPPC3-209ENST00000616395 KRTAP10-6P60371 365 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC3-209ENST00000616395 DEFB116Q30KQ4 102 aa9.77□□□□□ -0.85
TRAPPC3-209ENST00000616395 K7EQZ3 153 aa9.74□□□□□ -0.85
TRAPPC3-209ENST00000616395 PRR15Q8IV56 129 aa9.74□□□□□ -0.85
TRAPPC3-209ENST00000616395 Q8N9L7 120 aa9.74□□□□□ -0.85
TRAPPC3-209ENST00000616395 HCG22E2RYF7 251 aa9.72□□□□□ -0.85
TRAPPC3-209ENST00000616395 Q96NJ1 140 aa9.7□□□□□ -0.86
TRAPPC3-209ENST00000616395 XP32Q5T750 250 aa9.69□□□□□ -0.86
TRAPPC3-209ENST00000616395 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
TRAPPC3-209ENST00000616395 C8orf87E5RJ46 101 aa9.66□□□□□ -0.86
TRAPPC3-209ENST00000616395 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
TRAPPC3-209ENST00000616395 SERP2Q8N6R1 65 aa9.65□□□□□ -0.86
TRAPPC3-209ENST00000616395 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
TRAPPC3-209ENST00000616395 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
TRAPPC3-209ENST00000616395 C1orf195Q5TG92 126 aa9.63□□□□□ -0.87
TRAPPC3-209ENST00000616395 UQCRQO14949 82 aa9.61□□□□□ -0.87
TRAPPC3-209ENST00000616395 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
TRAPPC3-209ENST00000616395 C8orf17Q9NRJ1 99 aa9.61□□□□□ -0.87
TRAPPC3-209ENST00000616395 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
TRAPPC3-209ENST00000616395 M0R2T5 61 aa9.6□□□□□ -0.87
TRAPPC3-209ENST00000616395 COX7CP15954 63 aa9.6□□□□□ -0.87
TRAPPC3-209ENST00000616395 USH2AO75445 5202 aa9.57□□□□□ -0.88
TRAPPC3-209ENST00000616395 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
TRAPPC3-209ENST00000616395 LINC00313P59037 77 aa9.56□□□□□ -0.88
TRAPPC3-209ENST00000616395 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
TRAPPC3-209ENST00000616395 TMEM254Q8TBM7 123 aa9.56□□□□□ -0.88
TRAPPC3-209ENST00000616395 SSPOA2VEC9 5147 aa9.55□□□□□ -0.88
TRAPPC3-209ENST00000616395 TP53AIP1Q9HCN2 124 aa9.55□□□□□ -0.88
TRAPPC3-209ENST00000616395 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
TRAPPC3-209ENST00000616395 NDUFS5O43920 106 aa9.51□□□□□ -0.89
TRAPPC3-209ENST00000616395 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
TRAPPC3-209ENST00000616395 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
TRAPPC3-209ENST00000616395 MP68P56378 58 aa9.48□□□□□ -0.89
TRAPPC3-209ENST00000616395 FCGBPQ9Y6R7 5405 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC3-209ENST00000616395 CCDC179H3BU77 68 aa9.44□□□□□ -0.9
TRAPPC3-209ENST00000616395 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC3-209ENST00000616395 H3BPC8 53 aa9.43□□□□□ -0.9
TRAPPC3-209ENST00000616395 C20orf197Q8N268 126 aa9.43□□□□□ -0.9
TRAPPC3-209ENST00000616395 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
TRAPPC3-209ENST00000616395 NDUFC1O43677 76 aa9.41□□□□□ -0.9
TRAPPC3-209ENST00000616395 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
TRAPPC3-209ENST00000616395 TRAV22A0A0B4J277 110 aa9.38□□□□□ -0.91
TRAPPC3-209ENST00000616395 H0Y9P7 68 aa9.37□□□□□ -0.91
TRAPPC3-209ENST00000616395 KLKP1Q107X0 134 aa9.37□□□□□ -0.91
TRAPPC3-209ENST00000616395 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
TRAPPC3-209ENST00000616395 Q8N9P0 234 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC3-209ENST00000616395 SYNE2Q8WXH0 6885 aaKnown RBP9.32□□□□□ -0.92
TRAPPC3-209ENST00000616395 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
TRAPPC3-209ENST00000616395 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
TRAPPC3-209ENST00000616395 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
TRAPPC3-209ENST00000616395 C1orf64Q8NEQ6 169 aa9.28□□□□□ -0.92
TRAPPC3-209ENST00000616395 MACF1Q9UPN3 7388 aaKnown RBP9.28□□□□□ -0.92
TRAPPC3-209ENST00000616395 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
TRAPPC3-209ENST00000616395 TMEM258P61165 79 aa9.26□□□□□ -0.93
TRAPPC3-209ENST00000616395 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
TRAPPC3-209ENST00000616395 LCE2BO14633 110 aa9.22□□□□□ -0.93
TRAPPC3-209ENST00000616395 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3-209ENST00000616395 KRTAP9-8Q9BYQ0 159 aa9.22□□□□□ -0.93
TRAPPC3-209ENST00000616395 C20orf166-AS1Q96NR2 134 aa9.21□□□□□ -0.94
TRAPPC3-209ENST00000616395 A8MUU9 505 aa9.19□□□□□ -0.94
TRAPPC3-209ENST00000616395 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
TRAPPC3-209ENST00000616395 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
TRAPPC3-209ENST00000616395 H7BZZ5 65 aa9.17□□□□□ -0.94
TRAPPC3-209ENST00000616395 Q75L30 129 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms