RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
TNFAIP3-208ENST00000615468 SPRR1BP22528 89 aa6.24□□□□□ -1.41
TNFAIP3-208ENST00000615468 C1orf134Q5TEV5 83 aa6.24□□□□□ -1.41
TNFAIP3-208ENST00000615468 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
TNFAIP3-208ENST00000615468 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
TNFAIP3-208ENST00000615468 Q96NJ1 140 aa6.22□□□□□ -1.41
TNFAIP3-208ENST00000615468 ANAPC11Q9NYG5 84 aa6.21□□□□□ -1.42
TNFAIP3-208ENST00000615468 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
TNFAIP3-208ENST00000615468 SPINK1P00995 79 aa6.2□□□□□ -1.42
TNFAIP3-208ENST00000615468 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
TNFAIP3-208ENST00000615468 DMAC1Q96GE9 116 aa6.15□□□□□ -1.42
TNFAIP3-208ENST00000615468 HUWE1Q7Z6Z7 4374 aaKnown RBP6.15□□□□□ -1.43
TNFAIP3-208ENST00000615468 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
TNFAIP3-208ENST00000615468 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
TNFAIP3-208ENST00000615468 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
TNFAIP3-208ENST00000615468 CIRBP-AS1Q8TBR5 109 aa6.14□□□□□ -1.43
TNFAIP3-208ENST00000615468 LY6G6CO95867 125 aa6.13□□□□□ -1.43
TNFAIP3-208ENST00000615468 APLNQ9ULZ1 77 aa6.13□□□□□ -1.43
TNFAIP3-208ENST00000615468 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
TNFAIP3-208ENST00000615468 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
TNFAIP3-208ENST00000615468 ZNF861PO60384 105 aa6.1□□□□□ -1.43
TNFAIP3-208ENST00000615468 DNHD1Q96M86 4753 aa6.1□□□□□ -1.43
TNFAIP3-208ENST00000615468 NUPR2A6NF83 97 aa6.09□□□□□ -1.43
TNFAIP3-208ENST00000615468 CRIPTQ9P021 101 aa6.08□□□□□ -1.44
TNFAIP3-208ENST00000615468 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
TNFAIP3-208ENST00000615468 PANO1I0J062 215 aa6.08□□□□□ -1.44
TNFAIP3-208ENST00000615468 LYSTQ99698 3801 aa6.08□□□□□ -1.44
TNFAIP3-208ENST00000615468 NBDYA0A0U1RRE5 68 aa6.08□□□□□ -1.44
TNFAIP3-208ENST00000615468 ROMO1P60602 79 aa6.06□□□□□ -1.44
TNFAIP3-208ENST00000615468 WWC2-AS2Q96NR7 200 aa6.05□□□□□ -1.44
TNFAIP3-208ENST00000615468 FBN3Q75N90 2809 aa6.05□□□□□ -1.44
TNFAIP3-208ENST00000615468 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
TNFAIP3-208ENST00000615468 DNAH9Q9NYC9 4486 aa6.03□□□□□ -1.44
TNFAIP3-208ENST00000615468 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
TNFAIP3-208ENST00000615468 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
TNFAIP3-208ENST00000615468 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
TNFAIP3-208ENST00000615468 DMBT1Q9UGM3 2413 aaPredicted RBP6.03□□□□□ -1.44
TNFAIP3-208ENST00000615468 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
TNFAIP3-208ENST00000615468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.01□□□□□ -1.45
TNFAIP3-208ENST00000615468 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
TNFAIP3-208ENST00000615468 Q8N1X5 172 aa6□□□□□ -1.45
TNFAIP3-208ENST00000615468 PSORS1C2Q9UIG4 136 aa6□□□□□ -1.45
TNFAIP3-208ENST00000615468 PRKDCP78527 4128 aaKnown RBP5.99□□□□□ -1.45
TNFAIP3-208ENST00000615468 DNAH3Q8TD57 4116 aa5.99□□□□□ -1.45
TNFAIP3-208ENST00000615468 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
TNFAIP3-208ENST00000615468 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
TNFAIP3-208ENST00000615468 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
TNFAIP3-208ENST00000615468 A0A087WTM6 91 aa5.95□□□□□ -1.46
TNFAIP3-208ENST00000615468 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
TNFAIP3-208ENST00000615468 K7ERS5 55 aa5.94□□□□□ -1.46
TNFAIP3-208ENST00000615468 A8MUU9 505 aa5.94□□□□□ -1.46
TNFAIP3-208ENST00000615468 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
TNFAIP3-208ENST00000615468 DNAH7Q8WXX0 4024 aa5.92□□□□□ -1.46
TNFAIP3-208ENST00000615468 STARD9Q9P2P6 4700 aa5.91□□□□□ -1.46
TNFAIP3-208ENST00000615468 SPACA4Q8TDM5 124 aa5.91□□□□□ -1.46
TNFAIP3-208ENST00000615468 A0A1B0GU33 70 aa5.9□□□□□ -1.46
TNFAIP3-208ENST00000615468 H0YAA0 97 aa5.9□□□□□ -1.47
TNFAIP3-208ENST00000615468 Q6ZSA8 131 aa5.9□□□□□ -1.47
TNFAIP3-208ENST00000615468 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
TNFAIP3-208ENST00000615468 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
TNFAIP3-208ENST00000615468 P0C880 135 aa5.85□□□□□ -1.47
TNFAIP3-208ENST00000615468 TYMSOSQ8TAI1 123 aa5.85□□□□□ -1.47
TNFAIP3-208ENST00000615468 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
TNFAIP3-208ENST00000615468 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
TNFAIP3-208ENST00000615468 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
TNFAIP3-208ENST00000615468 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
TNFAIP3-208ENST00000615468 H1FX-AS1Q4G0G2 97 aa5.79□□□□□ -1.48
TNFAIP3-208ENST00000615468 KRTAP16-1A8MUX0 517 aa5.78□□□□□ -1.48
TNFAIP3-208ENST00000615468 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
TNFAIP3-208ENST00000615468 KRTAP10-1P60331 282 aa5.74□□□□□ -1.49
TNFAIP3-208ENST00000615468 A0A0D9SG42 100 aa5.74□□□□□ -1.49
TNFAIP3-208ENST00000615468 KRTAP21-3Q3LHN1 58 aa5.74□□□□□ -1.49
TNFAIP3-208ENST00000615468 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
TNFAIP3-208ENST00000615468 DNAH2Q9P225 4427 aa5.71□□□□□ -1.5
TNFAIP3-208ENST00000615468 DNAH11Q96DT5 4516 aa5.69□□□□□ -1.5
TNFAIP3-208ENST00000615468 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
TNFAIP3-208ENST00000615468 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
TNFAIP3-208ENST00000615468 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
TNFAIP3-208ENST00000615468 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
TNFAIP3-208ENST00000615468 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
TNFAIP3-208ENST00000615468 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
TNFAIP3-208ENST00000615468 DYNC2H1Q8NCM8 4307 aaKnown RBP5.65□□□□□ -1.51
TNFAIP3-208ENST00000615468 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
TNFAIP3-208ENST00000615468 FRAS1Q86XX4 4008 aa5.63□□□□□ -1.51
TNFAIP3-208ENST00000615468 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
TNFAIP3-208ENST00000615468 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
TNFAIP3-208ENST00000615468 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
TNFAIP3-208ENST00000615468 DNAH8Q96JB1 4490 aa5.6□□□□□ -1.51
TNFAIP3-208ENST00000615468 DNAH17Q9UFH2 4485 aa5.59□□□□□ -1.51
TNFAIP3-208ENST00000615468 HECTD4Q9Y4D8 3996 aa5.58□□□□□ -1.52
TNFAIP3-208ENST00000615468 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
TNFAIP3-208ENST00000615468 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
TNFAIP3-208ENST00000615468 DNAH5Q8TE73 4624 aa5.53□□□□□ -1.52
TNFAIP3-208ENST00000615468 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
TNFAIP3-208ENST00000615468 FAT1Q14517 4588 aa5.5□□□□□ -1.53
TNFAIP3-208ENST00000615468 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
TNFAIP3-208ENST00000615468 SACSQ9NZJ4 4579 aa5.48□□□□□ -1.53
TNFAIP3-208ENST00000615468 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
TNFAIP3-208ENST00000615468 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
TNFAIP3-208ENST00000615468 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms