RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 KLKP1Q107X0 134 aa10.27□□□□□ -0.76
GEN1-208ENST00000614478 C20orf197Q8N268 126 aa10.27□□□□□ -0.76
GEN1-208ENST00000614478 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
GEN1-208ENST00000614478 KRTAP29-1A8MX34 341 aaPredicted RBP10.25□□□□□ -0.77
GEN1-208ENST00000614478 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
GEN1-208ENST00000614478 MYCBP2O75592 4640 aa10.22□□□□□ -0.77
GEN1-208ENST00000614478 TMEM258P61165 79 aa10.22□□□□□ -0.77
GEN1-208ENST00000614478 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
GEN1-208ENST00000614478 Q5XG85 94 aa10.22□□□□□ -0.77
GEN1-208ENST00000614478 CASC2Q6XLA1 102 aa10.22□□□□□ -0.77
GEN1-208ENST00000614478 CYSTM1Q9H1C7 97 aa10.22□□□□□ -0.77
GEN1-208ENST00000614478 WFDC13Q8IUB5 93 aa10.21□□□□□ -0.78
GEN1-208ENST00000614478 TMEM254Q8TBM7 123 aa10.21□□□□□ -0.78
GEN1-208ENST00000614478 PCLOQ9Y6V0 5065 aa10.2□□□□□ -0.78
GEN1-208ENST00000614478 NDUFC1O43677 76 aa10.2□□□□□ -0.78
GEN1-208ENST00000614478 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
GEN1-208ENST00000614478 A0A1B0GVX0 72 aa10.18□□□□□ -0.78
GEN1-208ENST00000614478 SPINK1P00995 79 aa10.17□□□□□ -0.78
GEN1-208ENST00000614478 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
GEN1-208ENST00000614478 LIMD2Q9BT23 127 aa10.17□□□□□ -0.78
GEN1-208ENST00000614478 LRP1Q07954 4544 aaKnown RBP10.16□□□□□ -0.78
GEN1-208ENST00000614478 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
GEN1-208ENST00000614478 OXTP01178 125 aa10.15□□□□□ -0.79
GEN1-208ENST00000614478 C8orf17Q9NRJ1 99 aa10.15□□□□□ -0.79
GEN1-208ENST00000614478 SNURFQ9Y675 71 aa10.15□□□□□ -0.79
GEN1-208ENST00000614478 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
GEN1-208ENST00000614478 H7BZZ5 65 aa10.14□□□□□ -0.79
GEN1-208ENST00000614478 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
GEN1-208ENST00000614478 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
GEN1-208ENST00000614478 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
GEN1-208ENST00000614478 IGHV6-1A0A0B4J1U7 121 aa10.11□□□□□ -0.79
GEN1-208ENST00000614478 RPS29P62273 56 aaKnown RBP10.09□□□□□ -0.79
GEN1-208ENST00000614478 DMBT1Q9UGM3 2413 aaPredicted RBP10.08□□□□□ -0.8
GEN1-208ENST00000614478 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
GEN1-208ENST00000614478 H3BPC8 53 aa10.07□□□□□ -0.8
GEN1-208ENST00000614478 C8orf87E5RJ46 101 aa10.06□□□□□ -0.8
GEN1-208ENST00000614478 MP68P56378 58 aa10.06□□□□□ -0.8
GEN1-208ENST00000614478 ZCCHC13Q8WW36 166 aaKnown RBP10.06□□□□□ -0.8
GEN1-208ENST00000614478 ATP5EP56381 51 aaPredicted RBP10.04□□□□□ -0.8
GEN1-208ENST00000614478 NOTCH2NLQ7Z3S9 236 aa10.04□□□□□ -0.8
GEN1-208ENST00000614478 MRPL34Q9BQ48 92 aaKnown RBP10.04□□□□□ -0.8
GEN1-208ENST00000614478 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
GEN1-208ENST00000614478 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
GEN1-208ENST00000614478 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
GEN1-208ENST00000614478 J3QL48 77 aa10.02□□□□□ -0.8
GEN1-208ENST00000614478 MT1HL1P0DM35 61 aa10.02□□□□□ -0.8
GEN1-208ENST00000614478 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
GEN1-208ENST00000614478 H0Y9P7 68 aa10□□□□□ -0.81
GEN1-208ENST00000614478 TNXBP22105 4242 aa9.99□□□□□ -0.81
GEN1-208ENST00000614478 TRAV22A0A0B4J277 110 aa9.98□□□□□ -0.81
GEN1-208ENST00000614478 LINC00313P59037 77 aa9.96□□□□□ -0.81
GEN1-208ENST00000614478 LINC00208Q96KT6 92 aa9.95□□□□□ -0.82
GEN1-208ENST00000614478 V9GYY9 64 aa9.93□□□□□ -0.82
GEN1-208ENST00000614478 NDUFS5O43920 106 aa9.92□□□□□ -0.82
GEN1-208ENST00000614478 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
GEN1-208ENST00000614478 C1orf64Q8NEQ6 169 aa9.9□□□□□ -0.82
GEN1-208ENST00000614478 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
GEN1-208ENST00000614478 Q8N9P0 234 aaPredicted RBP9.87□□□□□ -0.83
GEN1-208ENST00000614478 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
GEN1-208ENST00000614478 SPANXA2-OT1Q8N9U9 137 aa9.83□□□□□ -0.84
GEN1-208ENST00000614478 CYP4F30PQ9H0H9 118 aa9.82□□□□□ -0.84
GEN1-208ENST00000614478 HERC1Q15751 4861 aa9.82□□□□□ -0.84
GEN1-208ENST00000614478 KRTAP13-3Q3SY46 172 aa9.81□□□□□ -0.84
GEN1-208ENST00000614478 LOC101927531A0A1B0GV80 90 aa9.79□□□□□ -0.84
GEN1-208ENST00000614478 C9orf92A6NGG3 77 aa9.76□□□□□ -0.85
GEN1-208ENST00000614478 Q5W150 140 aa9.76□□□□□ -0.85
GEN1-208ENST00000614478 PRO0628Q9UI54 55 aa9.74□□□□□ -0.85
GEN1-208ENST00000614478 IGLV7-46A0A075B6I9 117 aa9.71□□□□□ -0.85
GEN1-208ENST00000614478 FP248Q71RG6 208 aaPredicted RBP9.7□□□□□ -0.86
GEN1-208ENST00000614478 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
GEN1-208ENST00000614478 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
GEN1-208ENST00000614478 PRR4Q16378 134 aa9.64□□□□□ -0.87
GEN1-208ENST00000614478 C4orf26Q17RF5 130 aa9.64□□□□□ -0.87
GEN1-208ENST00000614478 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
GEN1-208ENST00000614478 A8MUU9 505 aa9.63□□□□□ -0.87
GEN1-208ENST00000614478 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
GEN1-208ENST00000614478 HMCN2Q8NDA2 5059 aa9.56□□□□□ -0.88
GEN1-208ENST00000614478 Q75L30 129 aa9.54□□□□□ -0.88
GEN1-208ENST00000614478 HRES1P13985 223 aa9.51□□□□□ -0.89
GEN1-208ENST00000614478 IGKV2D-30A0A075B6S6 120 aa9.5□□□□□ -0.89
GEN1-208ENST00000614478 XP32Q5T750 250 aa9.49□□□□□ -0.89
GEN1-208ENST00000614478 COA5Q86WW8 74 aa9.49□□□□□ -0.89
GEN1-208ENST00000614478 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
GEN1-208ENST00000614478 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
GEN1-208ENST00000614478 Q1T7F1 81 aa9.45□□□□□ -0.9
GEN1-208ENST00000614478 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
GEN1-208ENST00000614478 ACYP2P14621 99 aa9.44□□□□□ -0.9
GEN1-208ENST00000614478 RPL37P61927 97 aaKnown RBP9.44□□□□□ -0.9
GEN1-208ENST00000614478 LRP2P98164 4655 aa9.43□□□□□ -0.9
GEN1-208ENST00000614478 LPAP08519 4548 aa9.42□□□□□ -0.9
GEN1-208ENST00000614478 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
GEN1-208ENST00000614478 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
GEN1-208ENST00000614478 SPINK7P58062 85 aa9.34□□□□□ -0.91
GEN1-208ENST00000614478 H3BS24 57 aa9.32□□□□□ -0.92
GEN1-208ENST00000614478 A8MUN3 132 aa9.31□□□□□ -0.92
GEN1-208ENST00000614478 CHKB-CPT1BH3BT56 60 aa9.26□□□□□ -0.93
GEN1-208ENST00000614478 PMAIP1Q13794 54 aa9.26□□□□□ -0.93
GEN1-208ENST00000614478 LINC01558Q9Y6Z2 57 aa9.23□□□□□ -0.93
GEN1-208ENST00000614478 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
GEN1-208ENST00000614478 PSPHP1O15172 72 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms