RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ATP5EP2Q5VTU8 51 aa6.51□□□□□ -1.37
SLIRP-212ENST00000613856 Q96NJ1 140 aa6.51□□□□□ -1.37
SLIRP-212ENST00000613856 J3KT08 172 aa6.49□□□□□ -1.37
SLIRP-212ENST00000613856 CXCL6P80162 114 aa6.49□□□□□ -1.37
SLIRP-212ENST00000613856 BPY2O14599 106 aa6.48□□□□□ -1.37
SLIRP-212ENST00000613856 C1orf195Q5TG92 126 aa6.48□□□□□ -1.37
SLIRP-212ENST00000613856 SIGMAR1Q99720 223 aa6.48□□□□□ -1.37
SLIRP-212ENST00000613856 IGKV4-1P06312 121 aa6.45□□□□□ -1.38
SLIRP-212ENST00000613856 DSCR10P59022 87 aa6.44□□□□□ -1.38
SLIRP-212ENST00000613856 DEFB116Q30KQ4 102 aa6.44□□□□□ -1.38
SLIRP-212ENST00000613856 IGKV3D-7A0A0C4DH55 119 aa6.43□□□□□ -1.38
SLIRP-212ENST00000613856 A8MWP4 228 aa6.43□□□□□ -1.38
SLIRP-212ENST00000613856 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
SLIRP-212ENST00000613856 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
SLIRP-212ENST00000613856 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
SLIRP-212ENST00000613856 FP248Q71RG6 208 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-212ENST00000613856 K7EQZ3 153 aa6.4□□□□□ -1.38
SLIRP-212ENST00000613856 NDUFB1O75438 58 aa6.4□□□□□ -1.38
SLIRP-212ENST00000613856 PRR15Q8IV56 129 aa6.4□□□□□ -1.38
SLIRP-212ENST00000613856 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
SLIRP-212ENST00000613856 A0A1B0GVX0 72 aa6.39□□□□□ -1.39
SLIRP-212ENST00000613856 Q8N9L7 120 aa6.38□□□□□ -1.39
SLIRP-212ENST00000613856 RETNLBQ9BQ08 111 aa6.38□□□□□ -1.39
SLIRP-212ENST00000613856 C8orf87E5RJ46 101 aa6.36□□□□□ -1.39
SLIRP-212ENST00000613856 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
SLIRP-212ENST00000613856 PRR4Q16378 134 aa6.36□□□□□ -1.39
SLIRP-212ENST00000613856 A0A0U1RQV1 116 aa6.35□□□□□ -1.39
SLIRP-212ENST00000613856 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
SLIRP-212ENST00000613856 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
SLIRP-212ENST00000613856 C8orf17Q9NRJ1 99 aa6.33□□□□□ -1.4
SLIRP-212ENST00000613856 A0A087WVE0 104 aa6.32□□□□□ -1.4
SLIRP-212ENST00000613856 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
SLIRP-212ENST00000613856 IGLV7-46A0A075B6I9 117 aa6.31□□□□□ -1.4
SLIRP-212ENST00000613856 LINC00313P59037 77 aa6.3□□□□□ -1.4
SLIRP-212ENST00000613856 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
SLIRP-212ENST00000613856 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
SLIRP-212ENST00000613856 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
SLIRP-212ENST00000613856 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
SLIRP-212ENST00000613856 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
SLIRP-212ENST00000613856 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
SLIRP-212ENST00000613856 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
SLIRP-212ENST00000613856 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
SLIRP-212ENST00000613856 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
SLIRP-212ENST00000613856 TPRXLQ17RH7 258 aa6.26□□□□□ -1.41
SLIRP-212ENST00000613856 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
SLIRP-212ENST00000613856 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
SLIRP-212ENST00000613856 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
SLIRP-212ENST00000613856 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
SLIRP-212ENST00000613856 SCGB1A1P11684 91 aa6.23□□□□□ -1.41
SLIRP-212ENST00000613856 Q8N9P0 234 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-212ENST00000613856 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
SLIRP-212ENST00000613856 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
SLIRP-212ENST00000613856 A8MUU9 505 aa6.2□□□□□ -1.42
SLIRP-212ENST00000613856 ATOX1O00244 68 aa6.2□□□□□ -1.42
SLIRP-212ENST00000613856 XP32Q5T750 250 aa6.19□□□□□ -1.42
SLIRP-212ENST00000613856 Q75L30 129 aa6.18□□□□□ -1.42
SLIRP-212ENST00000613856 SMIM20Q8N5G0 67 aa6.18□□□□□ -1.42
SLIRP-212ENST00000613856 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
SLIRP-212ENST00000613856 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
SLIRP-212ENST00000613856 NDUFS5O43920 106 aa6.16□□□□□ -1.42
SLIRP-212ENST00000613856 RPL37P61927 97 aaKnown RBP6.15□□□□□ -1.42
SLIRP-212ENST00000613856 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
SLIRP-212ENST00000613856 UQCRQO14949 82 aa6.14□□□□□ -1.43
SLIRP-212ENST00000613856 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
SLIRP-212ENST00000613856 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
SLIRP-212ENST00000613856 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
SLIRP-212ENST00000613856 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
SLIRP-212ENST00000613856 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
SLIRP-212ENST00000613856 ANAPC13Q9BS18 74 aa6.08□□□□□ -1.44
SLIRP-212ENST00000613856 Q5W150 140 aa6.07□□□□□ -1.44
SLIRP-212ENST00000613856 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
SLIRP-212ENST00000613856 H0Y9P7 68 aa6.06□□□□□ -1.44
SLIRP-212ENST00000613856 H3BPC8 53 aa6.05□□□□□ -1.44
SLIRP-212ENST00000613856 COX7CP15954 63 aa6.05□□□□□ -1.44
SLIRP-212ENST00000613856 MP68P56378 58 aa6.04□□□□□ -1.44
SLIRP-212ENST00000613856 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
SLIRP-212ENST00000613856 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
SLIRP-212ENST00000613856 PCOTHQ58A44 107 aa6.01□□□□□ -1.45
SLIRP-212ENST00000613856 IGKV2-30P06310 120 aa6□□□□□ -1.45
SLIRP-212ENST00000613856 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
SLIRP-212ENST00000613856 C7orf65Q6ZTY9 151 aa5.98□□□□□ -1.45
SLIRP-212ENST00000613856 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
SLIRP-212ENST00000613856 C1orf64Q8NEQ6 169 aa5.98□□□□□ -1.45
SLIRP-212ENST00000613856 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
SLIRP-212ENST00000613856 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
SLIRP-212ENST00000613856 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
SLIRP-212ENST00000613856 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
SLIRP-212ENST00000613856 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
SLIRP-212ENST00000613856 SPINK7P58062 85 aa5.94□□□□□ -1.46
SLIRP-212ENST00000613856 MT1HP80294 61 aa5.93□□□□□ -1.46
SLIRP-212ENST00000613856 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
SLIRP-212ENST00000613856 PCP4P48539 62 aa5.92□□□□□ -1.46
SLIRP-212ENST00000613856 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
SLIRP-212ENST00000613856 NDUFC1O43677 76 aa5.9□□□□□ -1.46
SLIRP-212ENST00000613856 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
SLIRP-212ENST00000613856 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
SLIRP-212ENST00000613856 HRES1P13985 223 aa5.87□□□□□ -1.47
SLIRP-212ENST00000613856 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SLIRP-212ENST00000613856 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
SLIRP-212ENST00000613856 H7BZZ5 65 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms