RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
TPM1-233ENST00000610733 TP53AIP1Q9HCN2 124 aa5.82□□□□□ -1.48
TPM1-233ENST00000610733 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
TPM1-233ENST00000610733 A0A1B0GU69 56 aa5.81□□□□□ -1.48
TPM1-233ENST00000610733 LCE6AA0A183 80 aa5.8□□□□□ -1.48
TPM1-233ENST00000610733 ZNF861PO60384 105 aa5.8□□□□□ -1.48
TPM1-233ENST00000610733 SPANXA2-OT1Q8N9U9 137 aa5.8□□□□□ -1.48
TPM1-233ENST00000610733 SPINK7P58062 85 aa5.79□□□□□ -1.48
TPM1-233ENST00000610733 H3BPC8 53 aa5.79□□□□□ -1.48
TPM1-233ENST00000610733 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
TPM1-233ENST00000610733 SMR3BP02814 79 aaPredicted RBP5.77□□□□□ -1.49
TPM1-233ENST00000610733 ACYP2P14621 99 aa5.77□□□□□ -1.49
TPM1-233ENST00000610733 Q8N1X5 172 aa5.77□□□□□ -1.49
TPM1-233ENST00000610733 HRES1P13985 223 aa5.76□□□□□ -1.49
TPM1-233ENST00000610733 Q96NJ1 140 aa5.76□□□□□ -1.49
TPM1-233ENST00000610733 ASB16-AS1Q495Z4 193 aa5.75□□□□□ -1.49
TPM1-233ENST00000610733 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
TPM1-233ENST00000610733 MEGF8Q7Z7M0 2845 aa5.74□□□□□ -1.49
TPM1-233ENST00000610733 IGLV7-46A0A075B6I9 117 aa5.74□□□□□ -1.49
TPM1-233ENST00000610733 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
TPM1-233ENST00000610733 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
TPM1-233ENST00000610733 Q5W150 140 aa5.73□□□□□ -1.49
TPM1-233ENST00000610733 IGLV7-43P04211 117 aa5.73□□□□□ -1.49
TPM1-233ENST00000610733 WWC2-AS2Q96NR7 200 aa5.72□□□□□ -1.49
TPM1-233ENST00000610733 TYMSOSQ8TAI1 123 aa5.7□□□□□ -1.5
TPM1-233ENST00000610733 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
TPM1-233ENST00000610733 SPRR1BP22528 89 aa5.68□□□□□ -1.5
TPM1-233ENST00000610733 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
TPM1-233ENST00000610733 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
TPM1-233ENST00000610733 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
TPM1-233ENST00000610733 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
TPM1-233ENST00000610733 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
TPM1-233ENST00000610733 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
TPM1-233ENST00000610733 DNAH10Q8IVF4 4471 aa5.61□□□□□ -1.51
TPM1-233ENST00000610733 UQCR11O14957 56 aa5.61□□□□□ -1.51
TPM1-233ENST00000610733 ANK2Q01484 3957 aa5.61□□□□□ -1.51
TPM1-233ENST00000610733 Q6ZRN7 208 aaPredicted RBP5.6□□□□□ -1.51
TPM1-233ENST00000610733 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
TPM1-233ENST00000610733 PLAC8Q9NZF1 115 aa5.58□□□□□ -1.52
TPM1-233ENST00000610733 KRTAP13-1Q8IUC0 172 aa5.57□□□□□ -1.52
TPM1-233ENST00000610733 KRTAP10-1P60331 282 aa5.56□□□□□ -1.52
TPM1-233ENST00000610733 Q6ZR54 194 aa5.56□□□□□ -1.52
TPM1-233ENST00000610733 LYSTQ99698 3801 aa5.55□□□□□ -1.52
TPM1-233ENST00000610733 A0A0D9SG42 100 aa5.53□□□□□ -1.52
TPM1-233ENST00000610733 LINC00304Q8N9R0 145 aa5.53□□□□□ -1.52
TPM1-233ENST00000610733 LINC00483Q53H64 154 aa5.52□□□□□ -1.53
TPM1-233ENST00000610733 ROMO1P60602 79 aa5.52□□□□□ -1.53
TPM1-233ENST00000610733 K7ERS5 55 aa5.51□□□□□ -1.53
TPM1-233ENST00000610733 KRTAP13-2Q52LG2 175 aa5.49□□□□□ -1.53
TPM1-233ENST00000610733 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
TPM1-233ENST00000610733 DMAC1Q96GE9 116 aa5.46□□□□□ -1.54
TPM1-233ENST00000610733 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
TPM1-233ENST00000610733 KRTAP16-1A8MUX0 517 aa5.4□□□□□ -1.54
TPM1-233ENST00000610733 A0A1B0GU33 70 aa5.39□□□□□ -1.55
TPM1-233ENST00000610733 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
TPM1-233ENST00000610733 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
TPM1-233ENST00000610733 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.55
TPM1-233ENST00000610733 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
TPM1-233ENST00000610733 KRTAP21-3Q3LHN1 58 aa5.3□□□□□ -1.56
TPM1-233ENST00000610733 J3QL48 77 aa5.29□□□□□ -1.56
TPM1-233ENST00000610733 DNAH7Q8WXX0 4024 aa5.28□□□□□ -1.56
TPM1-233ENST00000610733 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
TPM1-233ENST00000610733 FRAS1Q86XX4 4008 aa5.27□□□□□ -1.57
TPM1-233ENST00000610733 DNAH11Q96DT5 4516 aa5.26□□□□□ -1.57
TPM1-233ENST00000610733 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
TPM1-233ENST00000610733 KMT2AQ03164 3969 aa5.25□□□□□ -1.57
TPM1-233ENST00000610733 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
TPM1-233ENST00000610733 A8MUU9 505 aa5.25□□□□□ -1.57
TPM1-233ENST00000610733 P0C880 135 aa5.24□□□□□ -1.57
TPM1-233ENST00000610733 STARD9Q9P2P6 4700 aa5.24□□□□□ -1.57
TPM1-233ENST00000610733 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
TPM1-233ENST00000610733 Q6ZSA8 131 aa5.23□□□□□ -1.57
TPM1-233ENST00000610733 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
TPM1-233ENST00000610733 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
TPM1-233ENST00000610733 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.58
TPM1-233ENST00000610733 DNAH1Q9P2D7 4330 aa5.21□□□□□ -1.58
TPM1-233ENST00000610733 PRKDCP78527 4128 aaKnown RBP5.2□□□□□ -1.58
TPM1-233ENST00000610733 DNHD1Q96M86 4753 aa5.2□□□□□ -1.58
TPM1-233ENST00000610733 CMYA5Q8N3K9 4069 aa5.19□□□□□ -1.58
TPM1-233ENST00000610733 H0YAA0 97 aa5.19□□□□□ -1.58
TPM1-233ENST00000610733 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
TPM1-233ENST00000610733 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
TPM1-233ENST00000610733 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
TPM1-233ENST00000610733 LRP1BQ9NZR2 4599 aa5.12□□□□□ -1.59
TPM1-233ENST00000610733 S4R3F8 94 aa5.12□□□□□ -1.59
TPM1-233ENST00000610733 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
TPM1-233ENST00000610733 Q5VSD8 79 aa5.11□□□□□ -1.59
TPM1-233ENST00000610733 DNAH6Q9C0G6 4158 aa5.11□□□□□ -1.59
TPM1-233ENST00000610733 FAT1Q14517 4588 aa5.1□□□□□ -1.59
TPM1-233ENST00000610733 DNAH17Q9UFH2 4485 aa5.09□□□□□ -1.59
TPM1-233ENST00000610733 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
TPM1-233ENST00000610733 KRTAP3-1Q9BYR8 98 aa5.05□□□□□ -1.6
TPM1-233ENST00000610733 VPS13DQ5THJ4 4388 aa5.04□□□□□ -1.6
TPM1-233ENST00000610733 DNAH2Q9P225 4427 aa5.04□□□□□ -1.6
TPM1-233ENST00000610733 DNAH5Q8TE73 4624 aa5.02□□□□□ -1.61
TPM1-233ENST00000610733 M0QZ58 72 aa4.98□□□□□ -1.61
TPM1-233ENST00000610733 R4GN34 69 aa4.97□□□□□ -1.61
TPM1-233ENST00000610733 HECTD4Q9Y4D8 3996 aa4.97□□□□□ -1.61
TPM1-233ENST00000610733 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.62
TPM1-233ENST00000610733 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms