RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 LINC00336Q6ZUF6 198 aa16.38■□□□□ 0.21
CSPG5-205ENST00000610462 LINC00208Q96KT6 92 aa16.38■□□□□ 0.21
CSPG5-205ENST00000610462 KRTAP1-4P0C5Y4 121 aa16.34■□□□□ 0.21
CSPG5-205ENST00000610462 SPINK6Q6UWN8 80 aa16.34■□□□□ 0.21
CSPG5-205ENST00000610462 TRAV22A0A0B4J277 110 aa16.33■□□□□ 0.2
CSPG5-205ENST00000610462 TP53AIP1Q9HCN2 124 aa16.33■□□□□ 0.2
CSPG5-205ENST00000610462 NOTCH2NLQ7Z3S9 236 aa16.3■□□□□ 0.2
CSPG5-205ENST00000610462 MRPL34Q9BQ48 92 aaKnown RBP16.29■□□□□ 0.2
CSPG5-205ENST00000610462 C1orf64Q8NEQ6 169 aa16.28■□□□□ 0.2
CSPG5-205ENST00000610462 CYP4F30PQ9H0H9 118 aa16.27■□□□□ 0.2
CSPG5-205ENST00000610462 VPS13BQ7Z7G8 4022 aa16.27■□□□□ 0.19
CSPG5-205ENST00000610462 MPLKIPQ8TAP9 179 aa16.25■□□□□ 0.19
CSPG5-205ENST00000610462 NDUFS5O43920 106 aa16.22■□□□□ 0.19
CSPG5-205ENST00000610462 PRR4Q16378 134 aa16.22■□□□□ 0.19
CSPG5-205ENST00000610462 A0A1B0GVY2 172 aa16.21■□□□□ 0.19
CSPG5-205ENST00000610462 PKHD1P08F94 4074 aa16.2■□□□□ 0.18
CSPG5-205ENST00000610462 PLA2G1BP04054 148 aaKnown RBP16.18■□□□□ 0.18
CSPG5-205ENST00000610462 C8orf87E5RJ46 101 aa16.17■□□□□ 0.18
CSPG5-205ENST00000610462 C1orf195Q5TG92 126 aa16.15■□□□□ 0.18
CSPG5-205ENST00000610462 SPANXA2-OT1Q8N9U9 137 aa16.12■□□□□ 0.17
CSPG5-205ENST00000610462 LIMD2Q9BT23 127 aa16.12■□□□□ 0.17
CSPG5-205ENST00000610462 TYMSOSQ8TAI1 123 aa16.11■□□□□ 0.17
CSPG5-205ENST00000610462 DYNC1H1Q14204 4646 aaKnown RBP16.11■□□□□ 0.17
CSPG5-205ENST00000610462 C4orf48Q5BLP8 95 aa16.06■□□□□ 0.16
CSPG5-205ENST00000610462 SMR3BP02814 79 aaPredicted RBP16.05■□□□□ 0.16
CSPG5-205ENST00000610462 LINC00313P59037 77 aa16.04■□□□□ 0.16
CSPG5-205ENST00000610462 Q1T7F1 81 aa16.03■□□□□ 0.16
CSPG5-205ENST00000610462 PRO0628Q9UI54 55 aa16.03■□□□□ 0.16
CSPG5-205ENST00000610462 SPINK1P00995 79 aa16.01■□□□□ 0.15
CSPG5-205ENST00000610462 RYR2Q92736 4967 aa15.98■□□□□ 0.15
CSPG5-205ENST00000610462 PCOTHQ58A44 107 aa15.96■□□□□ 0.15
CSPG5-205ENST00000610462 PRR26Q8N8Z3 221 aa15.96■□□□□ 0.15
CSPG5-205ENST00000610462 KRTAP13-3Q3SY46 172 aa15.95■□□□□ 0.14
CSPG5-205ENST00000610462 Q5W150 140 aa15.95■□□□□ 0.14
CSPG5-205ENST00000610462 IGLV7-46A0A075B6I9 117 aa15.93■□□□□ 0.14
CSPG5-205ENST00000610462 APOBP04114 4563 aaKnown RBP15.93■□□□□ 0.14
CSPG5-205ENST00000610462 BRK1Q8WUW1 75 aa15.92■□□□□ 0.14
CSPG5-205ENST00000610462 KRTAP10-4P60372 401 aaPredicted RBP15.91■□□□□ 0.14
CSPG5-205ENST00000610462 Q8N9P0 234 aaPredicted RBP15.91■□□□□ 0.14
CSPG5-205ENST00000610462 LINC00304Q8N9R0 145 aa15.9■□□□□ 0.14
CSPG5-205ENST00000610462 LOC101927531A0A1B0GV80 90 aa15.89■□□□□ 0.13
CSPG5-205ENST00000610462 KRTAP16-1A8MUX0 517 aa15.87■□□□□ 0.13
CSPG5-205ENST00000610462 RPS29P62273 56 aaKnown RBP15.87■□□□□ 0.13
CSPG5-205ENST00000610462 SPAG11AQ6PDA7 123 aa15.87■□□□□ 0.13
CSPG5-205ENST00000610462 V9GYY9 64 aa15.82■□□□□ 0.12
CSPG5-205ENST00000610462 FAM229AH3BQW9 127 aa15.81■□□□□ 0.12
CSPG5-205ENST00000610462 PSPHP1O15172 72 aa15.8■□□□□ 0.12
CSPG5-205ENST00000610462 COA5Q86WW8 74 aa15.77■□□□□ 0.11
CSPG5-205ENST00000610462 FAT1Q14517 4588 aa15.77■□□□□ 0.11
CSPG5-205ENST00000610462 KMT2CQ8NEZ4 4911 aaKnown RBP15.76■□□□□ 0.11
CSPG5-205ENST00000610462 A8MUN3 132 aa15.69■□□□□ 0.1
CSPG5-205ENST00000610462 RETNLBQ9BQ08 111 aa15.69■□□□□ 0.1
CSPG5-205ENST00000610462 PKHD1L1Q86WI1 4243 aa15.67■□□□□ 0.1
CSPG5-205ENST00000610462 IGKV2-30P06310 120 aa15.63■□□□□ 0.09
CSPG5-205ENST00000610462 Q5VV11 94 aa15.61■□□□□ 0.09
CSPG5-205ENST00000610462 HRES1P13985 223 aa15.55■□□□□ 0.08
CSPG5-205ENST00000610462 PRR15LQ9BU68 103 aa15.55■□□□□ 0.08
CSPG5-205ENST00000610462 CHKB-CPT1BH3BT56 60 aa15.45■□□□□ 0.06
CSPG5-205ENST00000610462 IGKV2D-30A0A075B6S6 120 aa15.43■□□□□ 0.06
CSPG5-205ENST00000610462 ACYP2P14621 99 aa15.42■□□□□ 0.06
CSPG5-205ENST00000610462 DMAC1Q96GE9 116 aa15.42■□□□□ 0.06
CSPG5-205ENST00000610462 Q75L30 129 aa15.42■□□□□ 0.06
CSPG5-205ENST00000610462 Q5VSD8 79 aa15.4■□□□□ 0.06
CSPG5-205ENST00000610462 LINC01558Q9Y6Z2 57 aa15.39■□□□□ 0.05
CSPG5-205ENST00000610462 C9orf92A6NGG3 77 aa15.38■□□□□ 0.05
CSPG5-205ENST00000610462 HSPG2P98160 4391 aa15.36■□□□□ 0.05
CSPG5-205ENST00000610462 RYR3Q15413 4870 aa15.35■□□□□ 0.05
CSPG5-205ENST00000610462 C20orf166-AS1Q96NR2 134 aa15.34■□□□□ 0.05
CSPG5-205ENST00000610462 A8MUU9 505 aa15.34■□□□□ 0.05
CSPG5-205ENST00000610462 KRTAP10-8P60410 259 aa15.31■□□□□ 0.04
CSPG5-205ENST00000610462 Q8N1X5 172 aa15.31■□□□□ 0.04
CSPG5-205ENST00000610462 A8MU10 97 aa15.3■□□□□ 0.04
CSPG5-205ENST00000610462 C7orf65Q6ZTY9 151 aa15.29■□□□□ 0.04
CSPG5-205ENST00000610462 FLG2Q5D862 2391 aaPredicted RBP15.28■□□□□ 0.04
CSPG5-205ENST00000610462 A6NED7 52 aa15.26■□□□□ 0.03
CSPG5-205ENST00000610462 TNXBP22105 4242 aa15.22■□□□□ 0.03
CSPG5-205ENST00000610462 RYR1P21817 5038 aa15.21■□□□□ 0.03
CSPG5-205ENST00000610462 LCA10Q71F78 164 aa15.17■□□□□ 0.02
CSPG5-205ENST00000610462 KRTAP17-1Q9BYP8 105 aa15.16■□□□□ 0.02
CSPG5-205ENST00000610462 LRP1Q07954 4544 aaKnown RBP15.16■□□□□ 0.02
CSPG5-205ENST00000610462 FAT3Q8TDW7 4589 aa15.13■□□□□ 0.01
CSPG5-205ENST00000610462 CDC42SE1Q9NRR8 79 aa15.1■□□□□ 0.01
CSPG5-205ENST00000610462 SPINK7P58062 85 aa15.05■□□□□ -0
CSPG5-205ENST00000610462 PMAIP1Q13794 54 aa15.03■□□□□ -0
CSPG5-205ENST00000610462 ATP11AUNQ6ZP68 121 aa15.03■□□□□ -0
CSPG5-205ENST00000610462 SPTSSBQ8NFR3 76 aa15.02□□□□□ -0.01
CSPG5-205ENST00000610462 KIAA1109Q2LD37 5005 aa14.94□□□□□ -0.02
CSPG5-205ENST00000610462 MT1HL1P0DM35 61 aa14.93□□□□□ -0.02
CSPG5-205ENST00000610462 A0A1B0GU69 56 aa14.86□□□□□ -0.03
CSPG5-205ENST00000610462 DMBT1Q9UGM3 2413 aaPredicted RBP14.85□□□□□ -0.03
CSPG5-205ENST00000610462 RPL37P61927 97 aaKnown RBP14.81□□□□□ -0.04
CSPG5-205ENST00000610462 KRTAP3-1Q9BYR8 98 aa14.8□□□□□ -0.04
CSPG5-205ENST00000610462 A6NN06 94 aa14.8□□□□□ -0.04
CSPG5-205ENST00000610462 XP32Q5T750 250 aa14.78□□□□□ -0.04
CSPG5-205ENST00000610462 EPPK1P58107 5090 aaKnown RBP14.78□□□□□ -0.04
CSPG5-205ENST00000610462 MYCBP2O75592 4640 aa14.71□□□□□ -0.05
CSPG5-205ENST00000610462 KTN1-AS1Q86SY8 53 aa14.71□□□□□ -0.05
CSPG5-205ENST00000610462 COX6B2Q6YFQ2 88 aa14.69□□□□□ -0.06
CSPG5-205ENST00000610462 SPATA8Q6RVD6 105 aa14.59□□□□□ -0.07
CSPG5-205ENST00000610462 UQCR11O14957 56 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms