RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
USP6NL-206ENST00000609853 HYDINQ4G0P3 5121 aa7.05□□□□□ -1.28
USP6NL-206ENST00000609853 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
USP6NL-206ENST00000609853 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
USP6NL-206ENST00000609853 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
USP6NL-206ENST00000609853 Q5XG85 94 aa7.02□□□□□ -1.29
USP6NL-206ENST00000609853 LRP1BQ9NZR2 4599 aa7.01□□□□□ -1.29
USP6NL-206ENST00000609853 H0Y9P7 68 aa7.01□□□□□ -1.29
USP6NL-206ENST00000609853 RYR2Q92736 4967 aa7□□□□□ -1.29
USP6NL-206ENST00000609853 IGHV6-1A0A0B4J1U7 121 aa7□□□□□ -1.29
USP6NL-206ENST00000609853 OXTP01178 125 aa6.99□□□□□ -1.29
USP6NL-206ENST00000609853 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
USP6NL-206ENST00000609853 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
USP6NL-206ENST00000609853 A0A087X002 238 aa6.98□□□□□ -1.29
USP6NL-206ENST00000609853 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
USP6NL-206ENST00000609853 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
USP6NL-206ENST00000609853 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
USP6NL-206ENST00000609853 C8orf87E5RJ46 101 aa6.96□□□□□ -1.29
USP6NL-206ENST00000609853 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
USP6NL-206ENST00000609853 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
USP6NL-206ENST00000609853 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
USP6NL-206ENST00000609853 C1orf64Q8NEQ6 169 aa6.95□□□□□ -1.3
USP6NL-206ENST00000609853 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
USP6NL-206ENST00000609853 SPANXA2-OT1Q8N9U9 137 aa6.94□□□□□ -1.3
USP6NL-206ENST00000609853 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
USP6NL-206ENST00000609853 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
USP6NL-206ENST00000609853 A0A1B0GVY2 172 aa6.93□□□□□ -1.3
USP6NL-206ENST00000609853 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
USP6NL-206ENST00000609853 EPPK1P58107 5090 aaKnown RBP6.92□□□□□ -1.3
USP6NL-206ENST00000609853 NDUFS5O43920 106 aa6.91□□□□□ -1.3
USP6NL-206ENST00000609853 SPINK1P00995 79 aa6.9□□□□□ -1.31
USP6NL-206ENST00000609853 C1orf195Q5TG92 126 aa6.9□□□□□ -1.31
USP6NL-206ENST00000609853 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.31
USP6NL-206ENST00000609853 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.31
USP6NL-206ENST00000609853 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
USP6NL-206ENST00000609853 LINC00313P59037 77 aa6.87□□□□□ -1.31
USP6NL-206ENST00000609853 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
USP6NL-206ENST00000609853 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
USP6NL-206ENST00000609853 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
USP6NL-206ENST00000609853 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
USP6NL-206ENST00000609853 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
USP6NL-206ENST00000609853 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
USP6NL-206ENST00000609853 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
USP6NL-206ENST00000609853 FP248Q71RG6 208 aaPredicted RBP6.84□□□□□ -1.31
USP6NL-206ENST00000609853 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
USP6NL-206ENST00000609853 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
USP6NL-206ENST00000609853 LINC00304Q8N9R0 145 aa6.81□□□□□ -1.32
USP6NL-206ENST00000609853 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
USP6NL-206ENST00000609853 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
USP6NL-206ENST00000609853 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
USP6NL-206ENST00000609853 PRR4Q16378 134 aa6.8□□□□□ -1.32
USP6NL-206ENST00000609853 C4orf26Q17RF5 130 aa6.8□□□□□ -1.32
USP6NL-206ENST00000609853 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
USP6NL-206ENST00000609853 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
USP6NL-206ENST00000609853 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
USP6NL-206ENST00000609853 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.32
USP6NL-206ENST00000609853 PCOTHQ58A44 107 aa6.77□□□□□ -1.33
USP6NL-206ENST00000609853 Q5W150 140 aa6.77□□□□□ -1.33
USP6NL-206ENST00000609853 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
USP6NL-206ENST00000609853 Q1T7F1 81 aa6.75□□□□□ -1.33
USP6NL-206ENST00000609853 V9GYY9 64 aa6.73□□□□□ -1.33
USP6NL-206ENST00000609853 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
USP6NL-206ENST00000609853 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
USP6NL-206ENST00000609853 COA5Q86WW8 74 aa6.7□□□□□ -1.34
USP6NL-206ENST00000609853 FAT1Q14517 4588 aa6.69□□□□□ -1.34
USP6NL-206ENST00000609853 IGKV2-30P06310 120 aa6.68□□□□□ -1.34
USP6NL-206ENST00000609853 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
USP6NL-206ENST00000609853 ACYP2P14621 99 aa6.64□□□□□ -1.35
USP6NL-206ENST00000609853 HRES1P13985 223 aa6.63□□□□□ -1.35
USP6NL-206ENST00000609853 DMAC1Q96GE9 116 aa6.62□□□□□ -1.35
USP6NL-206ENST00000609853 HERC2O95714 4834 aa6.61□□□□□ -1.35
USP6NL-206ENST00000609853 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
USP6NL-206ENST00000609853 KRTAP4-12Q9BQ66 201 aa6.59□□□□□ -1.35
USP6NL-206ENST00000609853 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
USP6NL-206ENST00000609853 LCE3BQ5TA77 95 aa6.59□□□□□ -1.36
USP6NL-206ENST00000609853 C20orf166-AS1Q96NR2 134 aa6.59□□□□□ -1.36
USP6NL-206ENST00000609853 A8MUU9 505 aa6.58□□□□□ -1.36
USP6NL-206ENST00000609853 Q5VSD8 79 aa6.58□□□□□ -1.36
USP6NL-206ENST00000609853 IGKV2D-30A0A075B6S6 120 aa6.57□□□□□ -1.36
USP6NL-206ENST00000609853 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
USP6NL-206ENST00000609853 C7orf65Q6ZTY9 151 aa6.56□□□□□ -1.36
USP6NL-206ENST00000609853 PRO0628Q9UI54 55 aa6.56□□□□□ -1.36
USP6NL-206ENST00000609853 PSPHP1O15172 72 aa6.56□□□□□ -1.36
USP6NL-206ENST00000609853 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
USP6NL-206ENST00000609853 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
USP6NL-206ENST00000609853 FLG2Q5D862 2391 aaPredicted RBP6.54□□□□□ -1.36
USP6NL-206ENST00000609853 A8MUN3 132 aa6.53□□□□□ -1.36
USP6NL-206ENST00000609853 HSPG2P98160 4391 aa6.53□□□□□ -1.36
USP6NL-206ENST00000609853 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
USP6NL-206ENST00000609853 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
USP6NL-206ENST00000609853 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
USP6NL-206ENST00000609853 Q5VV11 94 aa6.51□□□□□ -1.37
USP6NL-206ENST00000609853 Q8N1X5 172 aa6.51□□□□□ -1.37
USP6NL-206ENST00000609853 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
USP6NL-206ENST00000609853 RYR1P21817 5038 aa6.51□□□□□ -1.37
USP6NL-206ENST00000609853 Q75L30 129 aa6.5□□□□□ -1.37
USP6NL-206ENST00000609853 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
USP6NL-206ENST00000609853 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
USP6NL-206ENST00000609853 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
USP6NL-206ENST00000609853 TNXBP22105 4242 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms