RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 HUWE1Q7Z6Z7 4374 aaKnown RBP2.86□□□□□ -1.95
HDDC2-208ENST00000609021 Q96NJ1 140 aa2.85□□□□□ -1.95
HDDC2-208ENST00000609021 A0A1B0GUV1 79 aa2.85□□□□□ -1.95
HDDC2-208ENST00000609021 BRD3OSQ6XYD6 125 aa2.85□□□□□ -1.95
HDDC2-208ENST00000609021 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
HDDC2-208ENST00000609021 NIPBLQ6KC79 2804 aaeCLIP2.85□□□□□ -1.959e-8■□□□□ 8.9
HDDC2-208ENST00000609021 DNAH6Q9C0G6 4158 aa2.85□□□□□ -1.95
HDDC2-208ENST00000609021 LYNX1G3V0Z9 82 aa2.84□□□□□ -1.95
HDDC2-208ENST00000609021 H3BUA1 57 aa2.84□□□□□ -1.95
HDDC2-208ENST00000609021 LYNX1P0DP58 116 aa2.84□□□□□ -1.95
HDDC2-208ENST00000609021 STAB1Q9NY15 2570 aa2.84□□□□□ -1.96
HDDC2-208ENST00000609021 NBDYA0A0U1RRE5 68 aa2.84□□□□□ -1.96
HDDC2-208ENST00000609021 A0A1W2PNN7 141 aa2.84□□□□□ -1.96
HDDC2-208ENST00000609021 DEFB136Q30KP8 78 aa2.83□□□□□ -1.96
HDDC2-208ENST00000609021 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
HDDC2-208ENST00000609021 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
HDDC2-208ENST00000609021 Q6ZRX8 168 aa2.82□□□□□ -1.96
HDDC2-208ENST00000609021 DNHD1Q96M86 4753 aa2.82□□□□□ -1.96
HDDC2-208ENST00000609021 FAM168BA1KXE4 195 aa2.82□□□□□ -1.96
HDDC2-208ENST00000609021 KRTAP1-1Q07627 177 aa2.82□□□□□ -1.96
HDDC2-208ENST00000609021 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
HDDC2-208ENST00000609021 GVQW2A0A096LPI5 108 aaPredicted RBP2.81□□□□□ -1.96
HDDC2-208ENST00000609021 A0A096LPF7 62 aa2.81□□□□□ -1.96
HDDC2-208ENST00000609021 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
HDDC2-208ENST00000609021 PANO1I0J062 215 aa2.81□□□□□ -1.96
HDDC2-208ENST00000609021 FBN1P35555 2871 aaKnown RBP2.81□□□□□ -1.96
HDDC2-208ENST00000609021 TEX15Q9BXT5 2789 aa2.81□□□□□ -1.96
HDDC2-208ENST00000609021 LY6G6CO95867 125 aa2.81□□□□□ -1.96
HDDC2-208ENST00000609021 C4orf3Q8WVX3 66 aa2.81□□□□□ -1.96
HDDC2-208ENST00000609021 SPINK1P00995 79 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 DEFB130BP0DP73 79 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 DEFB130AP0DP74 79 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 C16orf74Q96GX8 76 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 PSORS1C2Q9UIG4 136 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 MAP1AP78559 2803 aaPredicted RBP2.8□□□□□ -1.96
HDDC2-208ENST00000609021 A0A0G2JQZ4 141 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 LY6EQ16553 131 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 MRPL34Q9BQ48 92 aaKnown RBP2.8□□□□□ -1.96
HDDC2-208ENST00000609021 DNAH2Q9P225 4427 aa2.8□□□□□ -1.96
HDDC2-208ENST00000609021 HECTD4Q9Y4D8 3996 aa2.79□□□□□ -1.96
HDDC2-208ENST00000609021 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
HDDC2-208ENST00000609021 KRTAP4-5Q9BYR2 181 aa2.79□□□□□ -1.96
HDDC2-208ENST00000609021 KRTAP10-9P60411 292 aa2.78□□□□□ -1.96
HDDC2-208ENST00000609021 PRLHP81277 87 aa2.78□□□□□ -1.96
HDDC2-208ENST00000609021 DNAH10Q8IVF4 4471 aa2.78□□□□□ -1.96
HDDC2-208ENST00000609021 VWFP04275 2813 aa2.78□□□□□ -1.96
HDDC2-208ENST00000609021 PKD1P98161 4303 aa2.78□□□□□ -1.96
HDDC2-208ENST00000609021 NF1P21359 2839 aa2.78□□□□□ -1.96
HDDC2-208ENST00000609021 A0A1B0GU33 70 aa2.77□□□□□ -1.97
HDDC2-208ENST00000609021 COL7A1Q02388 2944 aa2.77□□□□□ -1.97
HDDC2-208ENST00000609021 STARD9Q9P2P6 4700 aa2.77□□□□□ -1.97
HDDC2-208ENST00000609021 A0A096LNI7 61 aa2.77□□□□□ -1.97
HDDC2-208ENST00000609021 ITPR2Q14571 2701 aa2.77□□□□□ -1.97
HDDC2-208ENST00000609021 COL6A5A8TX70 2615 aa2.77□□□□□ -1.97
HDDC2-208ENST00000609021 TENM1Q9UKZ4 2725 aa2.76□□□□□ -1.97
HDDC2-208ENST00000609021 PRO0255Q9UI72 69 aa2.76□□□□□ -1.97
HDDC2-208ENST00000609021 VPS13DQ5THJ4 4388 aa2.76□□□□□ -1.97
HDDC2-208ENST00000609021 PLECQ15149 4684 aaKnown RBP2.76□□□□□ -1.97
HDDC2-208ENST00000609021 FBN3Q75N90 2809 aa2.74□□□□□ -1.97
HDDC2-208ENST00000609021 FAT2Q9NYQ8 4349 aa2.74□□□□□ -1.97
HDDC2-208ENST00000609021 DMBT1Q9UGM3 2413 aaPredicted RBP2.74□□□□□ -1.97
HDDC2-208ENST00000609021 DNAH11Q96DT5 4516 aa2.74□□□□□ -1.97
HDDC2-208ENST00000609021 H3BUX3 64 aa2.73□□□□□ -1.97
HDDC2-208ENST00000609021 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
HDDC2-208ENST00000609021 KRTAP19-1Q8IUB9 90 aa2.73□□□□□ -1.97
HDDC2-208ENST00000609021 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
HDDC2-208ENST00000609021 KMT2AQ03164 3969 aa2.72□□□□□ -1.97
HDDC2-208ENST00000609021 PKD1L1Q8TDX9 2849 aa2.72□□□□□ -1.97
HDDC2-208ENST00000609021 DNAH17Q9UFH2 4485 aa2.72□□□□□ -1.97
HDDC2-208ENST00000609021 H0YAA0 97 aa2.72□□□□□ -1.97
HDDC2-208ENST00000609021 Q6YL49 198 aa2.72□□□□□ -1.97
HDDC2-208ENST00000609021 Q6ZSA8 131 aa2.71□□□□□ -1.98
HDDC2-208ENST00000609021 FLNAP21333 2647 aaKnown RBP2.71□□□□□ -1.98
HDDC2-208ENST00000609021 K7EIL1 84 aa2.71□□□□□ -1.98
HDDC2-208ENST00000609021 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
HDDC2-208ENST00000609021 ALMS1Q8TCU4 4167 aa2.7□□□□□ -1.98
HDDC2-208ENST00000609021 SLURP1P55000 103 aa2.69□□□□□ -1.98
HDDC2-208ENST00000609021 TPRXLQ17RH7 258 aa2.69□□□□□ -1.98
HDDC2-208ENST00000609021 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
HDDC2-208ENST00000609021 PKHD1P08F94 4074 aa2.69□□□□□ -1.98
HDDC2-208ENST00000609021 HTN3P15516 51 aa2.69□□□□□ -1.98
HDDC2-208ENST00000609021 IGKV2D-30A0A075B6S6 120 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 IGKV2-30P06310 120 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 SPRR1AP35321 89 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 RPL37P61927 97 aaKnown RBP2.68□□□□□ -1.98
HDDC2-208ENST00000609021 SPINK6Q6UWN8 80 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 NSD1Q96L73 2696 aaPredicted RBP2.68□□□□□ -1.98
HDDC2-208ENST00000609021 KRTAP10-3P60369 221 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 C14orf177Q52M58 125 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 LELP1Q5T871 98 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 C10orf99Q6UWK7 81 aa2.68□□□□□ -1.98
HDDC2-208ENST00000609021 HIVEP1P15822 2718 aa2.67□□□□□ -1.98
HDDC2-208ENST00000609021 KRTAP23-1A1A580 65 aa2.67□□□□□ -1.98
HDDC2-208ENST00000609021 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
HDDC2-208ENST00000609021 DNAH5Q8TE73 4624 aa2.67□□□□□ -1.98
HDDC2-208ENST00000609021 PLAC4Q8WY50 150 aa2.66□□□□□ -1.98
HDDC2-208ENST00000609021 UBE2DNLQ8IWF7 75 aa2.66□□□□□ -1.98
HDDC2-208ENST00000609021 MAPK1IP1LQ8NDC0 245 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms