RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
CTCFL-216ENST00000608263 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
CTCFL-216ENST00000608263 A8MU10 97 aa6.27□□□□□ -1.41
CTCFL-216ENST00000608263 Q5VV11 94 aa6.27□□□□□ -1.41
CTCFL-216ENST00000608263 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
CTCFL-216ENST00000608263 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
CTCFL-216ENST00000608263 LCE6AA0A183 80 aa6.25□□□□□ -1.41
CTCFL-216ENST00000608263 A0A087X002 238 aa6.24□□□□□ -1.41
CTCFL-216ENST00000608263 SPRR1BP22528 89 aa6.24□□□□□ -1.41
CTCFL-216ENST00000608263 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
CTCFL-216ENST00000608263 NOTCH2NLQ7Z3S9 236 aa6.24□□□□□ -1.41
CTCFL-216ENST00000608263 ANK3Q12955 4377 aaKnown RBP6.24□□□□□ -1.41
CTCFL-216ENST00000608263 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
CTCFL-216ENST00000608263 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
CTCFL-216ENST00000608263 HRES1P13985 223 aa6.21□□□□□ -1.42
CTCFL-216ENST00000608263 SPINK7P58062 85 aa6.18□□□□□ -1.42
CTCFL-216ENST00000608263 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
CTCFL-216ENST00000608263 Q8N1X5 172 aa6.18□□□□□ -1.42
CTCFL-216ENST00000608263 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
CTCFL-216ENST00000608263 Q75L30 129 aa6.17□□□□□ -1.42
CTCFL-216ENST00000608263 CSMD3Q7Z407 3707 aa6.16□□□□□ -1.42
CTCFL-216ENST00000608263 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.43
CTCFL-216ENST00000608263 Q6ZR54 194 aa6.15□□□□□ -1.43
CTCFL-216ENST00000608263 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
CTCFL-216ENST00000608263 Q5W150 140 aa6.14□□□□□ -1.43
CTCFL-216ENST00000608263 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
CTCFL-216ENST00000608263 LCA10Q71F78 164 aa6.14□□□□□ -1.43
CTCFL-216ENST00000608263 Q5VSD8 79 aa6.13□□□□□ -1.43
CTCFL-216ENST00000608263 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
CTCFL-216ENST00000608263 UQCR11O14957 56 aa6.11□□□□□ -1.43
CTCFL-216ENST00000608263 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
CTCFL-216ENST00000608263 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
CTCFL-216ENST00000608263 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
CTCFL-216ENST00000608263 FBN3Q75N90 2809 aa6.08□□□□□ -1.44
CTCFL-216ENST00000608263 K7ERS5 55 aa6.07□□□□□ -1.44
CTCFL-216ENST00000608263 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
CTCFL-216ENST00000608263 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
CTCFL-216ENST00000608263 KRTAP21-3Q3LHN1 58 aa6.04□□□□□ -1.44
CTCFL-216ENST00000608263 A6NN06 94 aa6.03□□□□□ -1.44
CTCFL-216ENST00000608263 H3BS24 57 aa5.96□□□□□ -1.46
CTCFL-216ENST00000608263 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
CTCFL-216ENST00000608263 Q6ZSA8 131 aa5.95□□□□□ -1.46
CTCFL-216ENST00000608263 DMAC1Q96GE9 116 aa5.95□□□□□ -1.46
CTCFL-216ENST00000608263 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
CTCFL-216ENST00000608263 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
CTCFL-216ENST00000608263 A0A0D9SG42 100 aa5.9□□□□□ -1.46
CTCFL-216ENST00000608263 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
CTCFL-216ENST00000608263 MEGF8Q7Z7M0 2845 aa5.89□□□□□ -1.47
CTCFL-216ENST00000608263 M0R2T5 61 aa5.88□□□□□ -1.47
CTCFL-216ENST00000608263 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
CTCFL-216ENST00000608263 A0A1B0GU33 70 aa5.85□□□□□ -1.47
CTCFL-216ENST00000608263 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
CTCFL-216ENST00000608263 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
CTCFL-216ENST00000608263 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
CTCFL-216ENST00000608263 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
CTCFL-216ENST00000608263 ANK2Q01484 3957 aa5.75□□□□□ -1.49
CTCFL-216ENST00000608263 HUWE1Q7Z6Z7 4374 aaKnown RBP5.74□□□□□ -1.49
CTCFL-216ENST00000608263 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
CTCFL-216ENST00000608263 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
CTCFL-216ENST00000608263 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
CTCFL-216ENST00000608263 KRTAP13-3Q3SY46 172 aa5.69□□□□□ -1.5
CTCFL-216ENST00000608263 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
CTCFL-216ENST00000608263 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
CTCFL-216ENST00000608263 CMYA5Q8N3K9 4069 aa5.64□□□□□ -1.51
CTCFL-216ENST00000608263 S4R3F8 94 aa5.59□□□□□ -1.51
CTCFL-216ENST00000608263 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
CTCFL-216ENST00000608263 PRKDCP78527 4128 aaKnown RBP5.56□□□□□ -1.52
CTCFL-216ENST00000608263 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
CTCFL-216ENST00000608263 H0YAA0 97 aa5.56□□□□□ -1.52
CTCFL-216ENST00000608263 DNAH3Q8TD57 4116 aa5.54□□□□□ -1.52
CTCFL-216ENST00000608263 DNAH9Q9NYC9 4486 aa5.54□□□□□ -1.52
CTCFL-216ENST00000608263 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
CTCFL-216ENST00000608263 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
CTCFL-216ENST00000608263 A8MUU9 505 aa5.53□□□□□ -1.52
CTCFL-216ENST00000608263 R4GN34 69 aa5.52□□□□□ -1.53
CTCFL-216ENST00000608263 ROMO1P60602 79 aa5.51□□□□□ -1.53
CTCFL-216ENST00000608263 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
CTCFL-216ENST00000608263 LYSTQ99698 3801 aa5.51□□□□□ -1.53
CTCFL-216ENST00000608263 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
CTCFL-216ENST00000608263 A0A1B0GVY2 172 aa5.49□□□□□ -1.53
CTCFL-216ENST00000608263 DNAH1Q9P2D7 4330 aa5.46□□□□□ -1.54
CTCFL-216ENST00000608263 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
CTCFL-216ENST00000608263 M0QZ58 72 aa5.43□□□□□ -1.54
CTCFL-216ENST00000608263 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
CTCFL-216ENST00000608263 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
CTCFL-216ENST00000608263 XP32Q5T750 250 aa5.41□□□□□ -1.54
CTCFL-216ENST00000608263 STARD9Q9P2P6 4700 aa5.4□□□□□ -1.55
CTCFL-216ENST00000608263 P0C880 135 aa5.36□□□□□ -1.55
CTCFL-216ENST00000608263 KMT2AQ03164 3969 aa5.36□□□□□ -1.55
CTCFL-216ENST00000608263 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
CTCFL-216ENST00000608263 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
CTCFL-216ENST00000608263 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
CTCFL-216ENST00000608263 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
CTCFL-216ENST00000608263 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
CTCFL-216ENST00000608263 VPS13DQ5THJ4 4388 aa5.29□□□□□ -1.56
CTCFL-216ENST00000608263 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
CTCFL-216ENST00000608263 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
CTCFL-216ENST00000608263 DNAH17Q9UFH2 4485 aa5.27□□□□□ -1.57
CTCFL-216ENST00000608263 FAT1Q14517 4588 aa5.26□□□□□ -1.57
CTCFL-216ENST00000608263 TPRXLQ17RH7 258 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms