RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
CTSA-214ENST00000606788 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
CTSA-214ENST00000606788 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
CTSA-214ENST00000606788 SEC61GP60059 68 aa9.26□□□□□ -0.93
CTSA-214ENST00000606788 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
CTSA-214ENST00000606788 SERP1Q9Y6X1 66 aa9.26□□□□□ -0.93
CTSA-214ENST00000606788 LCE6AA0A183 80 aa9.25□□□□□ -0.93
CTSA-214ENST00000606788 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
CTSA-214ENST00000606788 ZCCHC13Q8WW36 166 aaKnown RBP9.25□□□□□ -0.93
CTSA-214ENST00000606788 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
CTSA-214ENST00000606788 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
CTSA-214ENST00000606788 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.93
CTSA-214ENST00000606788 SSBP3-AS1Q7Z2R9 100 aa9.2□□□□□ -0.94
CTSA-214ENST00000606788 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
CTSA-214ENST00000606788 Q5XG85 94 aa9.19□□□□□ -0.94
CTSA-214ENST00000606788 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
CTSA-214ENST00000606788 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
CTSA-214ENST00000606788 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
CTSA-214ENST00000606788 RYR2Q92736 4967 aa9.15□□□□□ -0.94
CTSA-214ENST00000606788 C1orf195Q5TG92 126 aa9.15□□□□□ -0.95
CTSA-214ENST00000606788 Q5W150 140 aa9.14□□□□□ -0.95
CTSA-214ENST00000606788 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
CTSA-214ENST00000606788 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
CTSA-214ENST00000606788 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
CTSA-214ENST00000606788 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
CTSA-214ENST00000606788 ASB16-AS1Q495Z4 193 aa9.1□□□□□ -0.95
CTSA-214ENST00000606788 LINC00336Q6ZUF6 198 aa9.1□□□□□ -0.95
CTSA-214ENST00000606788 SMIM26A0A096LP01 95 aa9.09□□□□□ -0.95
CTSA-214ENST00000606788 LINC00313P59037 77 aa9.08□□□□□ -0.96
CTSA-214ENST00000606788 CD164Q04900 197 aa9.08□□□□□ -0.96
CTSA-214ENST00000606788 V9GYY9 64 aa9.07□□□□□ -0.96
CTSA-214ENST00000606788 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
CTSA-214ENST00000606788 TP53AIP1Q9HCN2 124 aa9.05□□□□□ -0.96
CTSA-214ENST00000606788 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
CTSA-214ENST00000606788 RYR3Q15413 4870 aa9.02□□□□□ -0.97
CTSA-214ENST00000606788 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
CTSA-214ENST00000606788 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
CTSA-214ENST00000606788 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
CTSA-214ENST00000606788 PSPHP1O15172 72 aa9□□□□□ -0.97
CTSA-214ENST00000606788 H3BPC8 53 aa8.99□□□□□ -0.97
CTSA-214ENST00000606788 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
CTSA-214ENST00000606788 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
CTSA-214ENST00000606788 C9orf92A6NGG3 77 aa8.97□□□□□ -0.97
CTSA-214ENST00000606788 BRK1Q8WUW1 75 aa8.97□□□□□ -0.97
CTSA-214ENST00000606788 CYP4F30PQ9H0H9 118 aa8.96□□□□□ -0.98
CTSA-214ENST00000606788 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
CTSA-214ENST00000606788 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
CTSA-214ENST00000606788 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
CTSA-214ENST00000606788 SPINK1P00995 79 aa8.94□□□□□ -0.98
CTSA-214ENST00000606788 COA5Q86WW8 74 aa8.93□□□□□ -0.98
CTSA-214ENST00000606788 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
CTSA-214ENST00000606788 KRTAP10-4P60372 401 aaPredicted RBP8.91□□□□□ -0.98
CTSA-214ENST00000606788 SPANXA2-OT1Q8N9U9 137 aa8.91□□□□□ -0.98
CTSA-214ENST00000606788 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
CTSA-214ENST00000606788 KRTAP13-3Q3SY46 172 aa8.89□□□□□ -0.99
CTSA-214ENST00000606788 KIAA1109Q2LD37 5005 aa8.88□□□□□ -0.99
CTSA-214ENST00000606788 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
CTSA-214ENST00000606788 A8MUN3 132 aa8.86□□□□□ -0.99
CTSA-214ENST00000606788 MYCBP2O75592 4640 aa8.85□□□□□ -0.99
CTSA-214ENST00000606788 HRES1P13985 223 aa8.85□□□□□ -0.99
CTSA-214ENST00000606788 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
CTSA-214ENST00000606788 SPAG11AQ6PDA7 123 aa8.84□□□□□ -0.99
CTSA-214ENST00000606788 PKHD1L1Q86WI1 4243 aa8.84□□□□□ -0.99
CTSA-214ENST00000606788 HSPG2P98160 4391 aa8.83□□□□□ -1
CTSA-214ENST00000606788 KRTAP17-1Q9BYP8 105 aa8.8□□□□□ -1
CTSA-214ENST00000606788 Q5VSD8 79 aa8.79□□□□□ -1
CTSA-214ENST00000606788 PRR15LQ9BU68 103 aa8.79□□□□□ -1
CTSA-214ENST00000606788 Q8N1X5 172 aa8.77□□□□□ -1.01
CTSA-214ENST00000606788 Q1T7F1 81 aa8.76□□□□□ -1.01
CTSA-214ENST00000606788 A8MU10 97 aa8.75□□□□□ -1.01
CTSA-214ENST00000606788 EPPK1P58107 5090 aaKnown RBP8.75□□□□□ -1.01
CTSA-214ENST00000606788 RYR1P21817 5038 aa8.71□□□□□ -1.02
CTSA-214ENST00000606788 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.02
CTSA-214ENST00000606788 Q5VV11 94 aa8.68□□□□□ -1.02
CTSA-214ENST00000606788 C7orf65Q6ZTY9 151 aa8.68□□□□□ -1.02
CTSA-214ENST00000606788 FAT3Q8TDW7 4589 aa8.67□□□□□ -1.02
CTSA-214ENST00000606788 ACYP2P14621 99 aa8.66□□□□□ -1.02
CTSA-214ENST00000606788 TNXBP22105 4242 aa8.65□□□□□ -1.02
CTSA-214ENST00000606788 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
CTSA-214ENST00000606788 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
CTSA-214ENST00000606788 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
CTSA-214ENST00000606788 A6NED7 52 aa8.6□□□□□ -1.03
CTSA-214ENST00000606788 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
CTSA-214ENST00000606788 A8MUU9 505 aa8.53□□□□□ -1.04
CTSA-214ENST00000606788 SPINK7P58062 85 aa8.53□□□□□ -1.04
CTSA-214ENST00000606788 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.04
CTSA-214ENST00000606788 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
CTSA-214ENST00000606788 LINC01558Q9Y6Z2 57 aa8.52□□□□□ -1.05
CTSA-214ENST00000606788 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
CTSA-214ENST00000606788 LCA10Q71F78 164 aa8.47□□□□□ -1.05
CTSA-214ENST00000606788 H3BS24 57 aa8.46□□□□□ -1.06
CTSA-214ENST00000606788 Q75L30 129 aa8.46□□□□□ -1.06
CTSA-214ENST00000606788 A0A1B0GU69 56 aa8.43□□□□□ -1.06
CTSA-214ENST00000606788 ABCA13Q86UQ4 5058 aa8.43□□□□□ -1.06
CTSA-214ENST00000606788 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
CTSA-214ENST00000606788 LPAP08519 4548 aa8.42□□□□□ -1.06
CTSA-214ENST00000606788 ATP11AUNQ6ZP68 121 aa8.42□□□□□ -1.06
CTSA-214ENST00000606788 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
CTSA-214ENST00000606788 LRP2P98164 4655 aa8.41□□□□□ -1.06
CTSA-214ENST00000606788 RBM12B-AS1Q9P1G2 102 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms