RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
CTSA-210ENST00000606000 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
CTSA-210ENST00000606000 F8W1H4 67 aa6.45□□□□□ -1.38
CTSA-210ENST00000606000 Q75L30 129 aa6.45□□□□□ -1.38
CTSA-210ENST00000606000 DSCR10P59022 87 aa6.44□□□□□ -1.38
CTSA-210ENST00000606000 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
CTSA-210ENST00000606000 RBM3P98179 157 aaKnown RBP6.43□□□□□ -1.38
CTSA-210ENST00000606000 CCKP06307 115 aa6.42□□□□□ -1.38
CTSA-210ENST00000606000 SIGMAR1Q99720 223 aa6.42□□□□□ -1.38
CTSA-210ENST00000606000 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
CTSA-210ENST00000606000 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
CTSA-210ENST00000606000 DSCR8Q96T75 97 aa6.41□□□□□ -1.38
CTSA-210ENST00000606000 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
CTSA-210ENST00000606000 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
CTSA-210ENST00000606000 DEFB116Q30KQ4 102 aa6.4□□□□□ -1.38
CTSA-210ENST00000606000 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.38
CTSA-210ENST00000606000 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.38
CTSA-210ENST00000606000 A8MUU9 505 aa6.39□□□□□ -1.39
CTSA-210ENST00000606000 H3BT86 120 aa6.39□□□□□ -1.39
CTSA-210ENST00000606000 IGKV4-1P06312 121 aa6.39□□□□□ -1.39
CTSA-210ENST00000606000 PCP4P48539 62 aa6.39□□□□□ -1.39
CTSA-210ENST00000606000 COX6B2Q6YFQ2 88 aa6.39□□□□□ -1.39
CTSA-210ENST00000606000 JMJD7-PLA2G4BH0Y9G9 81 aa6.37□□□□□ -1.39
CTSA-210ENST00000606000 NOTCH2NLQ7Z3S9 236 aa6.37□□□□□ -1.39
CTSA-210ENST00000606000 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
CTSA-210ENST00000606000 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
CTSA-210ENST00000606000 Q6ZQT0 140 aa6.36□□□□□ -1.39
CTSA-210ENST00000606000 LINC00472Q9H8W2 130 aa6.36□□□□□ -1.39
CTSA-210ENST00000606000 LOC110117498A0A087WWA1 95 aa6.34□□□□□ -1.39
CTSA-210ENST00000606000 M0R2T5 61 aa6.34□□□□□ -1.39
CTSA-210ENST00000606000 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
CTSA-210ENST00000606000 J3QR89 54 aa6.33□□□□□ -1.4
CTSA-210ENST00000606000 LINC00313P59037 77 aa6.33□□□□□ -1.4
CTSA-210ENST00000606000 ETDBQ3ZM63 59 aa6.32□□□□□ -1.4
CTSA-210ENST00000606000 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
CTSA-210ENST00000606000 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
CTSA-210ENST00000606000 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
CTSA-210ENST00000606000 PDE6GP18545 87 aa6.3□□□□□ -1.4
CTSA-210ENST00000606000 A0A1B0GVX0 72 aa6.26□□□□□ -1.41
CTSA-210ENST00000606000 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
CTSA-210ENST00000606000 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
CTSA-210ENST00000606000 A0A1B0GW54 56 aa6.21□□□□□ -1.42
CTSA-210ENST00000606000 HRES1P13985 223 aa6.21□□□□□ -1.42
CTSA-210ENST00000606000 NREPQ16612 68 aa6.21□□□□□ -1.42
CTSA-210ENST00000606000 J3KT08 172 aa6.2□□□□□ -1.42
CTSA-210ENST00000606000 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
CTSA-210ENST00000606000 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
CTSA-210ENST00000606000 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
CTSA-210ENST00000606000 IGKV3D-7A0A0C4DH55 119 aa6.17□□□□□ -1.42
CTSA-210ENST00000606000 Q6ZVQ6 151 aa6.17□□□□□ -1.42
CTSA-210ENST00000606000 MPLKIPQ8TAP9 179 aa6.17□□□□□ -1.42
CTSA-210ENST00000606000 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
CTSA-210ENST00000606000 A8MWP4 228 aa6.16□□□□□ -1.42
CTSA-210ENST00000606000 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
CTSA-210ENST00000606000 ZCCHC13Q8WW36 166 aaKnown RBP6.16□□□□□ -1.42
CTSA-210ENST00000606000 C8orf17Q9NRJ1 99 aa6.16□□□□□ -1.42
CTSA-210ENST00000606000 LINC00846Q9NV44 126 aa6.16□□□□□ -1.42
CTSA-210ENST00000606000 NDUFB1O75438 58 aa6.15□□□□□ -1.42
CTSA-210ENST00000606000 MT-ATP8P03928 68 aa6.15□□□□□ -1.42
CTSA-210ENST00000606000 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
CTSA-210ENST00000606000 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
CTSA-210ENST00000606000 BPY2O14599 106 aa6.13□□□□□ -1.43
CTSA-210ENST00000606000 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
CTSA-210ENST00000606000 K7EQZ3 153 aa6.12□□□□□ -1.43
CTSA-210ENST00000606000 Q8N9L7 120 aa6.12□□□□□ -1.43
CTSA-210ENST00000606000 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
CTSA-210ENST00000606000 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
CTSA-210ENST00000606000 MMP24-AS1A0A0U1RRL7 71 aa6.1□□□□□ -1.43
CTSA-210ENST00000606000 ACYP1P07311 99 aa6.1□□□□□ -1.43
CTSA-210ENST00000606000 SPINK7P58062 85 aa6.1□□□□□ -1.43
CTSA-210ENST00000606000 PRR15Q8IV56 129 aa6.1□□□□□ -1.43
CTSA-210ENST00000606000 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
CTSA-210ENST00000606000 MT2AP02795 61 aa6.07□□□□□ -1.44
CTSA-210ENST00000606000 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
CTSA-210ENST00000606000 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
CTSA-210ENST00000606000 MT1FP04733 61 aa6.04□□□□□ -1.44
CTSA-210ENST00000606000 WFDC13Q8IUB5 93 aa6.04□□□□□ -1.44
CTSA-210ENST00000606000 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
CTSA-210ENST00000606000 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
CTSA-210ENST00000606000 LINC00643Q86TS7 51 aa6.01□□□□□ -1.45
CTSA-210ENST00000606000 NDUFS5O43920 106 aa6□□□□□ -1.45
CTSA-210ENST00000606000 CXCL6P80162 114 aa5.99□□□□□ -1.45
CTSA-210ENST00000606000 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
CTSA-210ENST00000606000 HIST1H4AP62805 103 aaKnown RBP5.97□□□□□ -1.45
CTSA-210ENST00000606000 Q5W150 140 aa5.97□□□□□ -1.45
CTSA-210ENST00000606000 HCG22E2RYF7 251 aa5.96□□□□□ -1.46
CTSA-210ENST00000606000 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
CTSA-210ENST00000606000 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
CTSA-210ENST00000606000 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
CTSA-210ENST00000606000 USH2AO75445 5202 aa5.95□□□□□ -1.46
CTSA-210ENST00000606000 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
CTSA-210ENST00000606000 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
CTSA-210ENST00000606000 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
CTSA-210ENST00000606000 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
CTSA-210ENST00000606000 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
CTSA-210ENST00000606000 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
CTSA-210ENST00000606000 A0A087WVE0 104 aa5.89□□□□□ -1.47
CTSA-210ENST00000606000 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
CTSA-210ENST00000606000 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
CTSA-210ENST00000606000 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms