RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 Q6ZQT0 140 aa10.11□□□□□ -0.79
SRSF4-206ENST00000605204 A0A1W2PPM0 123 aa10.08□□□□□ -0.8
SRSF4-206ENST00000605204 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
SRSF4-206ENST00000605204 H3BT86 120 aa10.07□□□□□ -0.8
SRSF4-206ENST00000605204 TAX1BP3O14907 124 aa10.07□□□□□ -0.8
SRSF4-206ENST00000605204 DEFB116Q30KQ4 102 aa10.07□□□□□ -0.8
SRSF4-206ENST00000605204 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
SRSF4-206ENST00000605204 IGHV6-1A0A0B4J1U7 121 aa10.04□□□□□ -0.8
SRSF4-206ENST00000605204 KRTAP16-1A8MUX0 517 aa10.03□□□□□ -0.8
SRSF4-206ENST00000605204 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
SRSF4-206ENST00000605204 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
SRSF4-206ENST00000605204 MT1HP80294 61 aa10.02□□□□□ -0.8
SRSF4-206ENST00000605204 NDUFB1O75438 58 aa10.01□□□□□ -0.81
SRSF4-206ENST00000605204 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
SRSF4-206ENST00000605204 COL5A1-AS1Q5SY13 56 aa9.97□□□□□ -0.81
SRSF4-206ENST00000605204 A8MWP4 228 aa9.95□□□□□ -0.82
SRSF4-206ENST00000605204 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
SRSF4-206ENST00000605204 NREPQ16612 68 aa9.93□□□□□ -0.82
SRSF4-206ENST00000605204 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
SRSF4-206ENST00000605204 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
SRSF4-206ENST00000605204 MTURNQ8N3F0 131 aa9.9□□□□□ -0.82
SRSF4-206ENST00000605204 M0R2T5 61 aa9.87□□□□□ -0.83
SRSF4-206ENST00000605204 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
SRSF4-206ENST00000605204 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
SRSF4-206ENST00000605204 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
SRSF4-206ENST00000605204 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
SRSF4-206ENST00000605204 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
SRSF4-206ENST00000605204 K7EP34 96 aa9.82□□□□□ -0.84
SRSF4-206ENST00000605204 ZCCHC13Q8WW36 166 aaKnown RBP9.82□□□□□ -0.84
SRSF4-206ENST00000605204 Q6ZVQ6 151 aa9.8□□□□□ -0.84
SRSF4-206ENST00000605204 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
SRSF4-206ENST00000605204 RBM12B-AS1Q9P1G2 102 aa9.78□□□□□ -0.84
SRSF4-206ENST00000605204 BPY2O14599 106 aa9.77□□□□□ -0.84
SRSF4-206ENST00000605204 GTF2H5Q6ZYL4 71 aa9.76□□□□□ -0.85
SRSF4-206ENST00000605204 PRO0461Q9UI25 63 aa9.76□□□□□ -0.85
SRSF4-206ENST00000605204 TMEM254Q8TBM7 123 aa9.75□□□□□ -0.85
SRSF4-206ENST00000605204 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
SRSF4-206ENST00000605204 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
SRSF4-206ENST00000605204 FAM236DA0A1B0GTK5 79 aa9.73□□□□□ -0.85
SRSF4-206ENST00000605204 K7EQZ3 153 aa9.73□□□□□ -0.85
SRSF4-206ENST00000605204 FAM236CP0DP71 79 aa9.73□□□□□ -0.85
SRSF4-206ENST00000605204 HRES1P13985 223 aa9.73□□□□□ -0.85
SRSF4-206ENST00000605204 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
SRSF4-206ENST00000605204 PCP4L1A6NKN8 68 aa9.71□□□□□ -0.86
SRSF4-206ENST00000605204 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
SRSF4-206ENST00000605204 SPINK7P58062 85 aa9.69□□□□□ -0.86
SRSF4-206ENST00000605204 UBL5Q9BZL1 73 aa9.69□□□□□ -0.86
SRSF4-206ENST00000605204 F8W1H4 67 aa9.68□□□□□ -0.86
SRSF4-206ENST00000605204 LINC00846Q9NV44 126 aa9.63□□□□□ -0.87
SRSF4-206ENST00000605204 NDUFS5O43920 106 aa9.62□□□□□ -0.87
SRSF4-206ENST00000605204 CASC2Q6XLA1 102 aa9.6□□□□□ -0.87
SRSF4-206ENST00000605204 SSPOA2VEC9 5147 aa9.59□□□□□ -0.87
SRSF4-206ENST00000605204 USH2AO75445 5202 aa9.58□□□□□ -0.88
SRSF4-206ENST00000605204 Q8N9L7 120 aa9.57□□□□□ -0.88
SRSF4-206ENST00000605204 WFDC13Q8IUB5 93 aa9.56□□□□□ -0.88
SRSF4-206ENST00000605204 ETDBQ3ZM63 59 aa9.55□□□□□ -0.88
SRSF4-206ENST00000605204 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.5□□□□□ -0.89
SRSF4-206ENST00000605204 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
SRSF4-206ENST00000605204 CXCL6P80162 114 aa9.5□□□□□ -0.89
SRSF4-206ENST00000605204 C7orf65Q6ZTY9 151 aa9.49□□□□□ -0.89
SRSF4-206ENST00000605204 KRTAP9-7A8MTY7 169 aa9.47□□□□□ -0.89
SRSF4-206ENST00000605204 KRTAP9-8Q9BYQ0 159 aa9.47□□□□□ -0.89
SRSF4-206ENST00000605204 ACYP1P07311 99 aa9.44□□□□□ -0.9
SRSF4-206ENST00000605204 IGKV2D-30A0A075B6S6 120 aa9.43□□□□□ -0.9
SRSF4-206ENST00000605204 IGKV2-30P06310 120 aa9.43□□□□□ -0.9
SRSF4-206ENST00000605204 Q5W150 140 aa9.43□□□□□ -0.9
SRSF4-206ENST00000605204 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
SRSF4-206ENST00000605204 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
SRSF4-206ENST00000605204 FCGBPQ9Y6R7 5405 aaPredicted RBP9.38□□□□□ -0.91
SRSF4-206ENST00000605204 H1FX-AS1Q4G0G2 97 aa9.36□□□□□ -0.91
SRSF4-206ENST00000605204 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
SRSF4-206ENST00000605204 MT2AP02795 61 aa9.35□□□□□ -0.91
SRSF4-206ENST00000605204 MT1FP04733 61 aa9.26□□□□□ -0.93
SRSF4-206ENST00000605204 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
SRSF4-206ENST00000605204 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
SRSF4-206ENST00000605204 LCE2BO14633 110 aa9.21□□□□□ -0.94
SRSF4-206ENST00000605204 LINC00643Q86TS7 51 aa9.19□□□□□ -0.94
SRSF4-206ENST00000605204 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
SRSF4-206ENST00000605204 A0A1B0GV90 55 aa9.18□□□□□ -0.94
SRSF4-206ENST00000605204 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
SRSF4-206ENST00000605204 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
SRSF4-206ENST00000605204 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
SRSF4-206ENST00000605204 LOC101927531A0A1B0GV80 90 aa9.12□□□□□ -0.95
SRSF4-206ENST00000605204 C1orf64Q8NEQ6 169 aa9.12□□□□□ -0.95
SRSF4-206ENST00000605204 J3QR89 54 aa9.11□□□□□ -0.95
SRSF4-206ENST00000605204 UQCRQO14949 82 aa9.11□□□□□ -0.95
SRSF4-206ENST00000605204 MACF1Q9UPN3 7388 aaKnown RBP9.1□□□□□ -0.95
SRSF4-206ENST00000605204 CYP4F30PQ9H0H9 118 aa9.1□□□□□ -0.95
SRSF4-206ENST00000605204 ATOX1O00244 68 aa9.09□□□□□ -0.95
SRSF4-206ENST00000605204 SYNE2Q8WXH0 6885 aaKnown RBP9.07□□□□□ -0.96
SRSF4-206ENST00000605204 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
SRSF4-206ENST00000605204 S4R3F8 94 aa9.06□□□□□ -0.96
SRSF4-206ENST00000605204 A0A087WVE0 104 aa9.01□□□□□ -0.97
SRSF4-206ENST00000605204 H0Y9P7 68 aa9□□□□□ -0.97
SRSF4-206ENST00000605204 CSAG1Q6PB30 78 aa9□□□□□ -0.97
SRSF4-206ENST00000605204 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
SRSF4-206ENST00000605204 LCA10Q71F78 164 aa8.96□□□□□ -0.98
SRSF4-206ENST00000605204 MP68P56378 58 aa8.91□□□□□ -0.98
SRSF4-206ENST00000605204 OCR1Q9BZK8 76 aa8.91□□□□□ -0.98
SRSF4-206ENST00000605204 KRTAP19-6Q3LI70 58 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms