RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
TUBE1-209ENST00000604814 DEFB110Q30KQ9 67 aa1.24□□□□□ -2.21
TUBE1-209ENST00000604814 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
TUBE1-209ENST00000604814 SRCAPQ6ZRS2 3230 aa1.23□□□□□ -2.21
TUBE1-209ENST00000604814 FBN3Q75N90 2809 aa1.23□□□□□ -2.21
TUBE1-209ENST00000604814 NAV2Q8IVL1 2488 aa1.23□□□□□ -2.21
TUBE1-209ENST00000604814 DEFB108AA8MXU0 73 aa1.23□□□□□ -2.21
TUBE1-209ENST00000604814 NBASA2RRP1 2371 aa1.23□□□□□ -2.21
TUBE1-209ENST00000604814 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
TUBE1-209ENST00000604814 DMBT1Q9UGM3 2413 aaPredicted RBP1.21□□□□□ -2.22
TUBE1-209ENST00000604814 SETD2Q9BYW2 2564 aaPredicted RBP1.21□□□□□ -2.22
TUBE1-209ENST00000604814 ZNF469Q96JG9 3925 aaPredicted RBP1.2□□□□□ -2.22
TUBE1-209ENST00000604814 TNRC18O15417 2968 aaPredicted RBP1.2□□□□□ -2.22
TUBE1-209ENST00000604814 DEFB133Q30KQ1 61 aa1.2□□□□□ -2.22
TUBE1-209ENST00000604814 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
TUBE1-209ENST00000604814 FAT2Q9NYQ8 4349 aa1.2□□□□□ -2.22
TUBE1-209ENST00000604814 EP400Q96L91 3159 aa1.19□□□□□ -2.22
TUBE1-209ENST00000604814 SPTBN4Q9H254 2564 aa1.19□□□□□ -2.22
TUBE1-209ENST00000604814 ZFYVE26Q68DK2 2539 aa1.19□□□□□ -2.22
TUBE1-209ENST00000604814 COL6A5A8TX70 2615 aa1.19□□□□□ -2.22
TUBE1-209ENST00000604814 FAM186AA6NE01 2351 aa1.18□□□□□ -2.22
TUBE1-209ENST00000604814 CEP350Q5VT06 3117 aa1.18□□□□□ -2.22
TUBE1-209ENST00000604814 COL6A3P12111 3177 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 PCNTO95613 3336 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 CRYBG3Q68DQ2 2970 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 PRM1P04553 51 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 CCDC168Q8NDH2 2452 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 DNAH12Q6ZR08 3092 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 CEP250Q9BV73 2442 aa1.17□□□□□ -2.22
TUBE1-209ENST00000604814 GOLGB1Q14789 3259 aaKnown RBP1.16□□□□□ -2.22
TUBE1-209ENST00000604814 PTPN13Q12923 2485 aa1.16□□□□□ -2.22
TUBE1-209ENST00000604814 M0QZ58 72 aa1.15□□□□□ -2.23
TUBE1-209ENST00000604814 MAP1BP46821 2468 aaKnown RBP1.14□□□□□ -2.23
TUBE1-209ENST00000604814 ZFHX4Q86UP3 3567 aa1.14□□□□□ -2.23
TUBE1-209ENST00000604814 DEFB108BQ8NET1 73 aa1.14□□□□□ -2.23
TUBE1-209ENST00000604814 DCHS2Q6V1P9 2916 aa1.14□□□□□ -2.23
TUBE1-209ENST00000604814 CENPFP49454 3210 aa1.14□□□□□ -2.23
TUBE1-209ENST00000604814 FRYQ5TBA9 3013 aa1.14□□□□□ -2.23
TUBE1-209ENST00000604814 DNAH11Q96DT5 4516 aa1.13□□□□□ -2.23
TUBE1-209ENST00000604814 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
TUBE1-209ENST00000604814 NBPF19A0A087WUL8 3843 aa1.13□□□□□ -2.23
TUBE1-209ENST00000604814 TNXBP22105 4242 aa1.13□□□□□ -2.23
TUBE1-209ENST00000604814 SPENQ96T58 3664 aaKnown RBP1.13□□□□□ -2.23
TUBE1-209ENST00000604814 PKD1L1Q8TDX9 2849 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 RIF1Q5UIP0 2472 aaKnown RBP1.12□□□□□ -2.23
TUBE1-209ENST00000604814 CACNA1AO00555 2505 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 EPG5Q9HCE0 2579 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 APC2O95996 2303 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 RANBP2P49792 3224 aaKnown RBP1.12□□□□□ -2.23
TUBE1-209ENST00000604814 PDZD2O15018 2839 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 APELAP0DMC3 54 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 NOTCH1P46531 2555 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 HTTP42858 3142 aa1.12□□□□□ -2.23
TUBE1-209ENST00000604814 LYSTQ99698 3801 aa1.11□□□□□ -2.23
TUBE1-209ENST00000604814 COL12A1Q99715 3063 aa1.11□□□□□ -2.23
TUBE1-209ENST00000604814 UTRNP46939 3433 aa1.11□□□□□ -2.23
TUBE1-209ENST00000604814 VPS13DQ5THJ4 4388 aa1.11□□□□□ -2.23
TUBE1-209ENST00000604814 PRKDCP78527 4128 aaKnown RBP1.1□□□□□ -2.23
TUBE1-209ENST00000604814 HIVEP3Q5T1R4 2406 aa1.1□□□□□ -2.23
TUBE1-209ENST00000604814 CFAP54Q96N23 3096 aa1.09□□□□□ -2.23
TUBE1-209ENST00000604814 RHPN1-AS1Q9BWJ2 59 aa1.09□□□□□ -2.23
TUBE1-209ENST00000604814 DNAH14Q0VDD8 3507 aa1.09□□□□□ -2.24
TUBE1-209ENST00000604814 NF1P21359 2839 aa1.09□□□□□ -2.24
TUBE1-209ENST00000604814 RELNP78509 3460 aa1.09□□□□□ -2.24
TUBE1-209ENST00000604814 USP24Q9UPU5 2620 aa1.08□□□□□ -2.24
TUBE1-209ENST00000604814 ZZEF1O43149 2961 aa1.08□□□□□ -2.24
TUBE1-209ENST00000604814 BRCA2P51587 3418 aa1.08□□□□□ -2.24
TUBE1-209ENST00000604814 FLNCQ14315 2725 aa1.07□□□□□ -2.24
TUBE1-209ENST00000604814 DEFB1P60022 68 aa1.07□□□□□ -2.24
TUBE1-209ENST00000604814 SETXQ7Z333 2677 aaKnown RBP1.07□□□□□ -2.24
TUBE1-209ENST00000604814 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
TUBE1-209ENST00000604814 H3BNG1 76 aa1.06□□□□□ -2.24
TUBE1-209ENST00000604814 WDR87Q6ZQQ6 2873 aa1.06□□□□□ -2.24
TUBE1-209ENST00000604814 SZT2Q5T011 3432 aa1.06□□□□□ -2.24
TUBE1-209ENST00000604814 C5orf42Q9H799 3197 aa1.06□□□□□ -2.24
TUBE1-209ENST00000604814 SPTBN5Q9NRC6 3674 aaKnown RBP1.06□□□□□ -2.24
TUBE1-209ENST00000604814 ANKHD1Q8IWZ3 2542 aaKnown RBP1.06□□□□□ -2.24
TUBE1-209ENST00000604814 NBEAQ8NFP9 2946 aa1.06□□□□□ -2.24
TUBE1-209ENST00000604814 LAMA2P24043 3122 aaKnown RBP1.06□□□□□ -2.24
TUBE1-209ENST00000604814 MKI67P46013 3256 aaKnown RBP1.05□□□□□ -2.24
TUBE1-209ENST00000604814 XIRP2A4UGR9 3374 aa1.05□□□□□ -2.24
TUBE1-209ENST00000604814 USP9YO00507 2555 aaPredicted RBP1.05□□□□□ -2.24
TUBE1-209ENST00000604814 UNC80Q8N2C7 3258 aa1.05□□□□□ -2.24
TUBE1-209ENST00000604814 USP34Q70CQ2 3546 aa1.05□□□□□ -2.24
TUBE1-209ENST00000604814 LAMA3Q16787 3333 aa1.05□□□□□ -2.24
TUBE1-209ENST00000604814 GCN1Q92616 2671 aaKnown RBP1.05□□□□□ -2.24
TUBE1-209ENST00000604814 MYCBP2O75592 4640 aa1.05□□□□□ -2.24
TUBE1-209ENST00000604814 SPTAN1Q13813 2472 aaKnown RBP1.04□□□□□ -2.24
TUBE1-209ENST00000604814 ACANP16112 2415 aa1.04□□□□□ -2.24
TUBE1-209ENST00000604814 KMT2AQ03164 3969 aa1.04□□□□□ -2.24
TUBE1-209ENST00000604814 CFAP47Q6ZTR5 3102 aa1.04□□□□□ -2.24
TUBE1-209ENST00000604814 VCANP13611 3396 aa1.04□□□□□ -2.24
TUBE1-209ENST00000604814 H3BUX3 64 aa1.03□□□□□ -2.24
TUBE1-209ENST00000604814 DEFB124Q8NES8 71 aa1.03□□□□□ -2.24
TUBE1-209ENST00000604814 LRRK2Q5S007 2527 aa1.03□□□□□ -2.24
TUBE1-209ENST00000604814 VPS13BQ7Z7G8 4022 aa1.03□□□□□ -2.24
TUBE1-209ENST00000604814 ATMQ13315 3056 aa1.03□□□□□ -2.24
TUBE1-209ENST00000604814 TNP1P09430 55 aa1.03□□□□□ -2.24
TUBE1-209ENST00000604814 HTN1P15515 57 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms