RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 J3KT08 172 aa9.18□□□□□ -0.94
CCDC12-208ENST00000603885 NAA38Q9BRA0 125 aaKnown RBP9.18□□□□□ -0.94
CCDC12-208ENST00000603885 Q6ZQT0 140 aa9.16□□□□□ -0.94
CCDC12-208ENST00000603885 FAM236DA0A1B0GTK5 79 aa9.15□□□□□ -0.94
CCDC12-208ENST00000603885 JMJD7-PLA2G4BH0Y9G9 81 aa9.15□□□□□ -0.94
CCDC12-208ENST00000603885 FAM236CP0DP71 79 aa9.15□□□□□ -0.94
CCDC12-208ENST00000603885 SMIM6P0DI80 62 aa9.14□□□□□ -0.95
CCDC12-208ENST00000603885 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
CCDC12-208ENST00000603885 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
CCDC12-208ENST00000603885 A0A1B0GW54 56 aa9.11□□□□□ -0.95
CCDC12-208ENST00000603885 NDUFB1O75438 58 aa9.11□□□□□ -0.95
CCDC12-208ENST00000603885 HRES1P13985 223 aa9.11□□□□□ -0.95
CCDC12-208ENST00000603885 PDE6GP18545 87 aa9.1□□□□□ -0.95
CCDC12-208ENST00000603885 LYRM7Q5U5X0 104 aa9.1□□□□□ -0.95
CCDC12-208ENST00000603885 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
CCDC12-208ENST00000603885 ZCCHC13Q8WW36 166 aaKnown RBP9.07□□□□□ -0.96
CCDC12-208ENST00000603885 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
CCDC12-208ENST00000603885 C14orf132Q9NPU4 83 aa9.06□□□□□ -0.96
CCDC12-208ENST00000603885 A8MWP4 228 aa9.05□□□□□ -0.96
CCDC12-208ENST00000603885 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
CCDC12-208ENST00000603885 BATFQ16520 125 aa9.03□□□□□ -0.96
CCDC12-208ENST00000603885 Q8N9P0 234 aaPredicted RBP9.03□□□□□ -0.96
CCDC12-208ENST00000603885 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
CCDC12-208ENST00000603885 MTURNQ8N3F0 131 aa9.01□□□□□ -0.97
CCDC12-208ENST00000603885 IGKV3D-7A0A0C4DH55 119 aa9□□□□□ -0.97
CCDC12-208ENST00000603885 SPINK7P58062 85 aa9□□□□□ -0.97
CCDC12-208ENST00000603885 NREPQ16612 68 aa8.98□□□□□ -0.97
CCDC12-208ENST00000603885 Q6ZVQ6 151 aa8.96□□□□□ -0.98
CCDC12-208ENST00000603885 PRR15Q8IV56 129 aa8.95□□□□□ -0.98
CCDC12-208ENST00000603885 MT2AP02795 61 aa8.94□□□□□ -0.98
CCDC12-208ENST00000603885 C9orf118A6NHY6 69 aa8.93□□□□□ -0.98
CCDC12-208ENST00000603885 H3BT86 120 aa8.93□□□□□ -0.98
CCDC12-208ENST00000603885 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
CCDC12-208ENST00000603885 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
CCDC12-208ENST00000603885 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
CCDC12-208ENST00000603885 USH2AO75445 5202 aa8.88□□□□□ -0.99
CCDC12-208ENST00000603885 MMP24-AS1A0A0U1RRL7 71 aa8.88□□□□□ -0.99
CCDC12-208ENST00000603885 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
CCDC12-208ENST00000603885 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
CCDC12-208ENST00000603885 MT1FP04733 61 aa8.87□□□□□ -0.99
CCDC12-208ENST00000603885 LOC105371267A0A1B0GV96 52 aa8.85□□□□□ -0.99
CCDC12-208ENST00000603885 K7EQZ3 153 aa8.85□□□□□ -0.99
CCDC12-208ENST00000603885 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
CCDC12-208ENST00000603885 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
CCDC12-208ENST00000603885 BPY2O14599 106 aa8.81□□□□□ -1
CCDC12-208ENST00000603885 NDUFS5O43920 106 aa8.81□□□□□ -1
CCDC12-208ENST00000603885 SSPOA2VEC9 5147 aa8.79□□□□□ -1
CCDC12-208ENST00000603885 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
CCDC12-208ENST00000603885 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
CCDC12-208ENST00000603885 LCE2BO14633 110 aa8.75□□□□□ -1.01
CCDC12-208ENST00000603885 Q8N9L7 120 aa8.71□□□□□ -1.02
CCDC12-208ENST00000603885 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
CCDC12-208ENST00000603885 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
CCDC12-208ENST00000603885 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
CCDC12-208ENST00000603885 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
CCDC12-208ENST00000603885 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
CCDC12-208ENST00000603885 C7orf65Q6ZTY9 151 aa8.68□□□□□ -1.02
CCDC12-208ENST00000603885 COL5A1-AS1Q5SY13 56 aa8.67□□□□□ -1.02
CCDC12-208ENST00000603885 Q5W150 140 aa8.67□□□□□ -1.02
CCDC12-208ENST00000603885 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.66□□□□□ -1.02
CCDC12-208ENST00000603885 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
CCDC12-208ENST00000603885 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CCDC12-208ENST00000603885 UBL5Q9BZL1 73 aa8.64□□□□□ -1.03
CCDC12-208ENST00000603885 FCGBPQ9Y6R7 5405 aaPredicted RBP8.63□□□□□ -1.03
CCDC12-208ENST00000603885 LINC00846Q9NV44 126 aa8.62□□□□□ -1.03
CCDC12-208ENST00000603885 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
CCDC12-208ENST00000603885 K7EP34 96 aa8.61□□□□□ -1.03
CCDC12-208ENST00000603885 CXCL6P80162 114 aa8.61□□□□□ -1.03
CCDC12-208ENST00000603885 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
CCDC12-208ENST00000603885 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
CCDC12-208ENST00000603885 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
CCDC12-208ENST00000603885 KRTAP19-6Q3LI70 58 aa8.47□□□□□ -1.05
CCDC12-208ENST00000603885 F8W1H4 67 aa8.45□□□□□ -1.06
CCDC12-208ENST00000603885 ETDBQ3ZM63 59 aa8.43□□□□□ -1.06
CCDC12-208ENST00000603885 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
CCDC12-208ENST00000603885 MACF1Q9UPN3 7388 aaKnown RBP8.43□□□□□ -1.06
CCDC12-208ENST00000603885 PCP4L1A6NKN8 68 aa8.39□□□□□ -1.07
CCDC12-208ENST00000603885 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
CCDC12-208ENST00000603885 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
CCDC12-208ENST00000603885 C1orf64Q8NEQ6 169 aa8.38□□□□□ -1.07
CCDC12-208ENST00000603885 S4R3F8 94 aa8.38□□□□□ -1.07
CCDC12-208ENST00000603885 SYNE2Q8WXH0 6885 aaKnown RBP8.36□□□□□ -1.07
CCDC12-208ENST00000603885 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
CCDC12-208ENST00000603885 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
CCDC12-208ENST00000603885 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
CCDC12-208ENST00000603885 LCA10Q71F78 164 aa8.3□□□□□ -1.08
CCDC12-208ENST00000603885 ACYP1P07311 99 aa8.26□□□□□ -1.09
CCDC12-208ENST00000603885 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
CCDC12-208ENST00000603885 TRAV22A0A0B4J277 110 aa8.24□□□□□ -1.09
CCDC12-208ENST00000603885 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
CCDC12-208ENST00000603885 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
CCDC12-208ENST00000603885 ATP5EP2Q5VTU8 51 aa8.21□□□□□ -1.1
CCDC12-208ENST00000603885 HIST1H4AP62805 103 aaKnown RBP8.18□□□□□ -1.1
CCDC12-208ENST00000603885 SPRR2GQ9BYE4 73 aa8.16□□□□□ -1.1
CCDC12-208ENST00000603885 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
CCDC12-208ENST00000603885 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
CCDC12-208ENST00000603885 Q5VV11 94 aa8.14□□□□□ -1.11
CCDC12-208ENST00000603885 UQCRQO14949 82 aa8.13□□□□□ -1.11
CCDC12-208ENST00000603885 MT1BP07438 61 aa8.12□□□□□ -1.11
CCDC12-208ENST00000603885 H0Y9P7 68 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms