RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 IGHV6-1A0A0B4J1U7 121 aa6.53□□□□□ -1.36
RPS28-204ENST00000602140 H3BQ85 93 aa6.52□□□□□ -1.37
RPS28-204ENST00000602140 TRACP01848 142 aa6.52□□□□□ -1.37
RPS28-204ENST00000602140 CCKP06307 115 aa6.52□□□□□ -1.37
RPS28-204ENST00000602140 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
RPS28-204ENST00000602140 TMEM256-PLSCR3K7ERE1 68 aa6.51□□□□□ -1.37
RPS28-204ENST00000602140 PSMB2P49721 201 aa6.51□□□□□ -1.37
RPS28-204ENST00000602140 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
RPS28-204ENST00000602140 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
RPS28-204ENST00000602140 K7ERJ3 54 aa6.48□□□□□ -1.37
RPS28-204ENST00000602140 M0R143 59 aa6.48□□□□□ -1.37
RPS28-204ENST00000602140 COX6CP09669 75 aa6.47□□□□□ -1.37
RPS28-204ENST00000602140 HSD52Q0P140 79 aa6.47□□□□□ -1.37
RPS28-204ENST00000602140 C21orf62-AS1Q17RA5 79 aa6.47□□□□□ -1.37
RPS28-204ENST00000602140 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
RPS28-204ENST00000602140 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
RPS28-204ENST00000602140 UBE2V1Q13404 147 aa6.46□□□□□ -1.38
RPS28-204ENST00000602140 VPS25Q9BRG1 176 aa6.46□□□□□ -1.38
RPS28-204ENST00000602140 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
RPS28-204ENST00000602140 BATFQ16520 125 aa6.45□□□□□ -1.38
RPS28-204ENST00000602140 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
RPS28-204ENST00000602140 ZCCHC13Q8WW36 166 aaKnown RBP6.43□□□□□ -1.38
RPS28-204ENST00000602140 SPINK7P58062 85 aa6.42□□□□□ -1.38
RPS28-204ENST00000602140 RBM3P98179 157 aaKnown RBP6.42□□□□□ -1.38
RPS28-204ENST00000602140 COL5A1-AS1Q5SY13 56 aa6.41□□□□□ -1.38
RPS28-204ENST00000602140 DSCR8Q96T75 97 aa6.41□□□□□ -1.38
RPS28-204ENST00000602140 J3KT08 172 aa6.38□□□□□ -1.39
RPS28-204ENST00000602140 SCGB1C2P0DMR2 95 aa6.38□□□□□ -1.39
RPS28-204ENST00000602140 C9JAW5 83 aa6.36□□□□□ -1.39
RPS28-204ENST00000602140 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
RPS28-204ENST00000602140 NDUFB1O75438 58 aa6.35□□□□□ -1.39
RPS28-204ENST00000602140 BAALC-AS2P0C853 105 aa6.35□□□□□ -1.39
RPS28-204ENST00000602140 Q6ZQT0 140 aa6.35□□□□□ -1.39
RPS28-204ENST00000602140 WFDC13Q8IUB5 93 aa6.34□□□□□ -1.39
RPS28-204ENST00000602140 LYRM7Q5U5X0 104 aa6.33□□□□□ -1.4
RPS28-204ENST00000602140 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
RPS28-204ENST00000602140 A8MWP4 228 aa6.32□□□□□ -1.4
RPS28-204ENST00000602140 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
RPS28-204ENST00000602140 C8orf17Q9NRJ1 99 aa6.32□□□□□ -1.4
RPS28-204ENST00000602140 MACF1Q9UPN3 7388 aaKnown RBP6.31□□□□□ -1.4
RPS28-204ENST00000602140 TAX1BP3O14907 124 aa6.31□□□□□ -1.4
RPS28-204ENST00000602140 A0A1B0GV90 55 aa6.3□□□□□ -1.4
RPS28-204ENST00000602140 IGKV3D-7A0A0C4DH55 119 aa6.29□□□□□ -1.4
RPS28-204ENST00000602140 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
RPS28-204ENST00000602140 Q6ZVQ6 151 aa6.27□□□□□ -1.41
RPS28-204ENST00000602140 JMJD7-PLA2G4BH0Y9G9 81 aa6.26□□□□□ -1.41
RPS28-204ENST00000602140 LOC110117498A0A087WWA1 95 aa6.25□□□□□ -1.41
RPS28-204ENST00000602140 A0A1B0GW54 56 aa6.25□□□□□ -1.41
RPS28-204ENST00000602140 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
RPS28-204ENST00000602140 A0A1W2PPM0 123 aa6.24□□□□□ -1.41
RPS28-204ENST00000602140 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
RPS28-204ENST00000602140 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
RPS28-204ENST00000602140 NAA38Q9BRA0 125 aaKnown RBP6.23□□□□□ -1.41
RPS28-204ENST00000602140 PDE6GP18545 87 aa6.22□□□□□ -1.41
RPS28-204ENST00000602140 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
RPS28-204ENST00000602140 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
RPS28-204ENST00000602140 GTF2H5Q6ZYL4 71 aa6.21□□□□□ -1.42
RPS28-204ENST00000602140 K7EP34 96 aa6.2□□□□□ -1.42
RPS28-204ENST00000602140 NREPQ16612 68 aa6.2□□□□□ -1.42
RPS28-204ENST00000602140 MRPL34Q9BQ48 92 aaKnown RBP6.2□□□□□ -1.42
RPS28-204ENST00000602140 SPCS1Q9Y6A9 102 aa6.2□□□□□ -1.42
RPS28-204ENST00000602140 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
RPS28-204ENST00000602140 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
RPS28-204ENST00000602140 hDV103S1A0JD37 113 aa6.16□□□□□ -1.42
RPS28-204ENST00000602140 NDUFS5O43920 106 aa6.16□□□□□ -1.42
RPS28-204ENST00000602140 K7EQZ3 153 aa6.14□□□□□ -1.43
RPS28-204ENST00000602140 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
RPS28-204ENST00000602140 IGKV2-30P06310 120 aa6.13□□□□□ -1.43
RPS28-204ENST00000602140 KRTAP6-3Q3LI67 103 aa6.13□□□□□ -1.43
RPS28-204ENST00000602140 Q5W150 140 aa6.11□□□□□ -1.43
RPS28-204ENST00000602140 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
RPS28-204ENST00000602140 F8W1H4 67 aa6.08□□□□□ -1.44
RPS28-204ENST00000602140 BPY2O14599 106 aa6.06□□□□□ -1.44
RPS28-204ENST00000602140 PRO0461Q9UI25 63 aa6.06□□□□□ -1.44
RPS28-204ENST00000602140 H3BT86 120 aa6.05□□□□□ -1.44
RPS28-204ENST00000602140 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
RPS28-204ENST00000602140 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
RPS28-204ENST00000602140 CASC2Q6XLA1 102 aa6.02□□□□□ -1.45
RPS28-204ENST00000602140 Q8N9L7 120 aa6.02□□□□□ -1.45
RPS28-204ENST00000602140 C5orf47Q569G3 176 aa6.01□□□□□ -1.45
RPS28-204ENST00000602140 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
RPS28-204ENST00000602140 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
RPS28-204ENST00000602140 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
RPS28-204ENST00000602140 A6NN06 94 aa5.97□□□□□ -1.45
RPS28-204ENST00000602140 CXCL6P80162 114 aa5.97□□□□□ -1.45
RPS28-204ENST00000602140 MT1BP07438 61 aa5.96□□□□□ -1.46
RPS28-204ENST00000602140 J3QR89 54 aa5.95□□□□□ -1.46
RPS28-204ENST00000602140 K7ERU9 68 aa5.95□□□□□ -1.46
RPS28-204ENST00000602140 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
RPS28-204ENST00000602140 S4R3F8 94 aa5.94□□□□□ -1.46
RPS28-204ENST00000602140 Q5VV11 94 aa5.93□□□□□ -1.46
RPS28-204ENST00000602140 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
RPS28-204ENST00000602140 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
RPS28-204ENST00000602140 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
RPS28-204ENST00000602140 LCA10Q71F78 164 aa5.9□□□□□ -1.46
RPS28-204ENST00000602140 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.46
RPS28-204ENST00000602140 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
RPS28-204ENST00000602140 UBL5Q9BZL1 73 aa5.86□□□□□ -1.47
RPS28-204ENST00000602140 NEBP20929 6669 aa5.86□□□□□ -1.47
RPS28-204ENST00000602140 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms