RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 Q5VSD8 79 aa6.99□□□□□ -1.29
SHANK2-218ENST00000601538 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
SHANK2-218ENST00000601538 LAMA1P25391 3075 aa6.96□□□□□ -1.3
SHANK2-218ENST00000601538 COL12A1Q99715 3063 aa6.96□□□□□ -1.3
SHANK2-218ENST00000601538 FBN2P35556 2912 aa6.95□□□□□ -1.3
SHANK2-218ENST00000601538 DCHS2Q6V1P9 2916 aa6.93□□□□□ -1.3
SHANK2-218ENST00000601538 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.3
SHANK2-218ENST00000601538 DMXL2Q8TDJ6 3036 aa6.89□□□□□ -1.31
SHANK2-218ENST00000601538 DMXL1Q9Y485 3027 aa6.86□□□□□ -1.31
SHANK2-218ENST00000601538 XIRP2A4UGR9 3374 aa6.86□□□□□ -1.31
SHANK2-218ENST00000601538 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
SHANK2-218ENST00000601538 WDFY4Q6ZS81 3184 aa6.84□□□□□ -1.31
SHANK2-218ENST00000601538 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
SHANK2-218ENST00000601538 VWFP04275 2813 aa6.83□□□□□ -1.32
SHANK2-218ENST00000601538 P0C880 135 aa6.81□□□□□ -1.32
SHANK2-218ENST00000601538 RANBP2P49792 3224 aaKnown RBP6.79□□□□□ -1.32
SHANK2-218ENST00000601538 ADGRG4Q8IZF6 3080 aa6.78□□□□□ -1.32
SHANK2-218ENST00000601538 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
SHANK2-218ENST00000601538 H0YAA0 97 aa6.76□□□□□ -1.33
SHANK2-218ENST00000601538 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
SHANK2-218ENST00000601538 HTTP42858 3142 aa6.73□□□□□ -1.33
SHANK2-218ENST00000601538 FREM2Q5SZK8 3169 aa6.73□□□□□ -1.33
SHANK2-218ENST00000601538 MKI67P46013 3256 aaKnown RBP6.7□□□□□ -1.34
SHANK2-218ENST00000601538 PKD1L1Q8TDX9 2849 aa6.7□□□□□ -1.34
SHANK2-218ENST00000601538 REV3LO60673 3130 aa6.67□□□□□ -1.34
SHANK2-218ENST00000601538 ATMQ13315 3056 aa6.67□□□□□ -1.34
SHANK2-218ENST00000601538 BOD1L1Q8NFC6 3051 aa6.66□□□□□ -1.34
SHANK2-218ENST00000601538 CELSR3Q9NYQ7 3312 aa6.62□□□□□ -1.35
SHANK2-218ENST00000601538 USP34Q70CQ2 3546 aa6.61□□□□□ -1.35
SHANK2-218ENST00000601538 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
SHANK2-218ENST00000601538 KRTAP13-2Q52LG2 175 aa6.6□□□□□ -1.35
SHANK2-218ENST00000601538 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
SHANK2-218ENST00000601538 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
SHANK2-218ENST00000601538 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
SHANK2-218ENST00000601538 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
SHANK2-218ENST00000601538 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
SHANK2-218ENST00000601538 CELSR1Q9NYQ6 3014 aa6.53□□□□□ -1.36
SHANK2-218ENST00000601538 UNC80Q8N2C7 3258 aa6.53□□□□□ -1.36
SHANK2-218ENST00000601538 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
SHANK2-218ENST00000601538 DNAH14Q0VDD8 3507 aa6.49□□□□□ -1.37
SHANK2-218ENST00000601538 COL6A3P12111 3177 aa6.48□□□□□ -1.37
SHANK2-218ENST00000601538 BRCA2P51587 3418 aa6.46□□□□□ -1.37
SHANK2-218ENST00000601538 INE1O15225 51 aa6.42□□□□□ -1.38
SHANK2-218ENST00000601538 COL7A1Q02388 2944 aa6.41□□□□□ -1.38
SHANK2-218ENST00000601538 VCANP13611 3396 aa6.41□□□□□ -1.38
SHANK2-218ENST00000601538 MEGF8Q7Z7M0 2845 aa6.35□□□□□ -1.39
SHANK2-218ENST00000601538 CDH23Q9H251 3354 aa6.34□□□□□ -1.39
SHANK2-218ENST00000601538 XP32Q5T750 250 aa6.34□□□□□ -1.39
SHANK2-218ENST00000601538 CFAP47Q6ZTR5 3102 aa6.34□□□□□ -1.4
SHANK2-218ENST00000601538 TPRXLQ17RH7 258 aa6.31□□□□□ -1.4
SHANK2-218ENST00000601538 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
SHANK2-218ENST00000601538 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
SHANK2-218ENST00000601538 SPEGQ15772 3267 aa6.26□□□□□ -1.41
SHANK2-218ENST00000601538 FBN3Q75N90 2809 aa6.21□□□□□ -1.42
SHANK2-218ENST00000601538 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
SHANK2-218ENST00000601538 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
SHANK2-218ENST00000601538 SPTBN5Q9NRC6 3674 aaKnown RBP6.18□□□□□ -1.42
SHANK2-218ENST00000601538 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
SHANK2-218ENST00000601538 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
SHANK2-218ENST00000601538 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
SHANK2-218ENST00000601538 NBPF19A0A087WUL8 3843 aa6.13□□□□□ -1.43
SHANK2-218ENST00000601538 OTOGQ6ZRI0 2925 aa6.1□□□□□ -1.43
SHANK2-218ENST00000601538 SPENQ96T58 3664 aaKnown RBP6.08□□□□□ -1.44
SHANK2-218ENST00000601538 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
SHANK2-218ENST00000601538 EYSQ5T1H1 3165 aa6.07□□□□□ -1.44
SHANK2-218ENST00000601538 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
SHANK2-218ENST00000601538 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
SHANK2-218ENST00000601538 AKAP9Q99996 3911 aa6.05□□□□□ -1.44
SHANK2-218ENST00000601538 MYO15AQ9UKN7 3530 aa6.05□□□□□ -1.44
SHANK2-218ENST00000601538 SZT2Q5T011 3432 aa6.04□□□□□ -1.44
SHANK2-218ENST00000601538 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
SHANK2-218ENST00000601538 WDFY3Q8IZQ1 3526 aa6□□□□□ -1.45
SHANK2-218ENST00000601538 LOC400499M0QZD8 3231 aa5.96□□□□□ -1.46
SHANK2-218ENST00000601538 DMDP11532 3685 aa5.96□□□□□ -1.46
SHANK2-218ENST00000601538 ZFHX4Q86UP3 3567 aa5.96□□□□□ -1.46
SHANK2-218ENST00000601538 LAMA5O15230 3695 aa5.92□□□□□ -1.46
SHANK2-218ENST00000601538 SMG1Q96Q15 3661 aaKnown RBP5.89□□□□□ -1.47
SHANK2-218ENST00000601538 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
SHANK2-218ENST00000601538 ASPMQ8IZT6 3477 aa5.82□□□□□ -1.48
SHANK2-218ENST00000601538 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
SHANK2-218ENST00000601538 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
SHANK2-218ENST00000601538 RELNP78509 3460 aa5.74□□□□□ -1.49
SHANK2-218ENST00000601538 DCHS1Q96JQ0 3298 aa5.73□□□□□ -1.49
SHANK2-218ENST00000601538 TRRAPQ9Y4A5 3859 aa5.68□□□□□ -1.5
SHANK2-218ENST00000601538 CSMD1Q96PZ7 3565 aa5.63□□□□□ -1.51
SHANK2-218ENST00000601538 BSNQ9UPA5 3926 aa5.61□□□□□ -1.51
SHANK2-218ENST00000601538 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
SHANK2-218ENST00000601538 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
SHANK2-218ENST00000601538 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
SHANK2-218ENST00000601538 SVEP1Q4LDE5 3571 aa5.46□□□□□ -1.53
SHANK2-218ENST00000601538 DNAH3Q8TD57 4116 aa5.46□□□□□ -1.54
SHANK2-218ENST00000601538 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
SHANK2-218ENST00000601538 HECTD4Q9Y4D8 3996 aa5.36□□□□□ -1.55
SHANK2-218ENST00000601538 LYSTQ99698 3801 aa5.36□□□□□ -1.55
SHANK2-218ENST00000601538 CMYA5Q8N3K9 4069 aa5.35□□□□□ -1.55
SHANK2-218ENST00000601538 MUC3AQ02505 3323 aa5.34□□□□□ -1.55
SHANK2-218ENST00000601538 CUBNO60494 3623 aa5.31□□□□□ -1.56
SHANK2-218ENST00000601538 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SHANK2-218ENST00000601538 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
SHANK2-218ENST00000601538 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms