RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP62-222	ENST00000600935	HIST1H2BH	Q93079	126 aa		4.93	□□□□□ -1.62
NUP62-222	ENST00000600935	HIST1H2BN	Q99877	126 aa		4.93	□□□□□ -1.62
NUP62-222	ENST00000600935	HIST1H2BM	Q99879	126 aa		4.93	□□□□□ -1.62
NUP62-222	ENST00000600935	SPRR2G	Q9BYE4	73 aa		4.93	□□□□□ -1.62
NUP62-222	ENST00000600935	SPRR2F	Q96RM1	72 aa		4.92	□□□□□ -1.62
NUP62-222	ENST00000600935	FABP2	P12104	132 aa		4.89	□□□□□ -1.63
NUP62-222	ENST00000600935	ANKRD29	Q8N6D5	301 aa		4.88	□□□□□ -1.63
NUP62-222	ENST00000600935	LCE1A	Q5T7P2	110 aa		4.87	□□□□□ -1.63
NUP62-222	ENST00000600935		A0A1B0GV72	72 aa		4.86	□□□□□ -1.63
NUP62-222	ENST00000600935		H0YGX0	51 aa		4.86	□□□□□ -1.63
NUP62-222	ENST00000600935	SNCG	O76070	127 aa		4.84	□□□□□ -1.63
NUP62-222	ENST00000600935	CCK	P06307	115 aa		4.84	□□□□□ -1.63
NUP62-222	ENST00000600935	FAM236A	A0A1B0GUQ0	79 aa		4.83	□□□□□ -1.64
NUP62-222	ENST00000600935	FAM236B	A0A1B0GV22	79 aa		4.83	□□□□□ -1.64
NUP62-222	ENST00000600935	TRAC	P01848	142 aa		4.83	□□□□□ -1.64
NUP62-222	ENST00000600935	COA6	Q5JTJ3	125 aa	Known RBP	4.83	□□□□□ -1.64
NUP62-222	ENST00000600935	IGKV3D-7	A0A0C4DH55	119 aa		4.82	□□□□□ -1.64
NUP62-222	ENST00000600935		A0A1B0GX51	115 aa		4.82	□□□□□ -1.64
NUP62-222	ENST00000600935	SNRPE	P62304	92 aa	Known RBP	4.82	□□□□□ -1.64
NUP62-222	ENST00000600935	LYRM7	Q5U5X0	104 aa		4.8	□□□□□ -1.64
NUP62-222	ENST00000600935	HIST1H4G	Q99525	98 aa		4.8	□□□□□ -1.64
NUP62-222	ENST00000600935	SPRR2D	P22532	72 aa		4.79	□□□□□ -1.64
NUP62-222	ENST00000600935	C8orf17	Q9NRJ1	99 aa		4.79	□□□□□ -1.64
NUP62-222	ENST00000600935	C5orf47	Q569G3	176 aa		4.78	□□□□□ -1.64
NUP62-222	ENST00000600935	DSCR8	Q96T75	97 aa		4.78	□□□□□ -1.64
NUP62-222	ENST00000600935		J3KT08	172 aa		4.77	□□□□□ -1.65
NUP62-222	ENST00000600935		A0A0B4J2C4	111 aa		4.76	□□□□□ -1.65
NUP62-222	ENST00000600935	IMUP	Q9GZP8	106 aa		4.75	□□□□□ -1.65
NUP62-222	ENST00000600935		Q6ZVQ6	151 aa		4.74	□□□□□ -1.65
NUP62-222	ENST00000600935	VPS25	Q9BRG1	176 aa		4.74	□□□□□ -1.65
NUP62-222	ENST00000600935	ORMDL1	Q9P0S3	153 aa		4.74	□□□□□ -1.65
NUP62-222	ENST00000600935	TRIAP1	O43715	76 aa		4.73	□□□□□ -1.65
NUP62-222	ENST00000600935	KRTAP8-1	Q8IUC2	63 aa		4.73	□□□□□ -1.65
NUP62-222	ENST00000600935	NDUFB1	O75438	58 aa		4.72	□□□□□ -1.65
NUP62-222	ENST00000600935	S100A6	P06703	90 aa		4.72	□□□□□ -1.65
NUP62-222	ENST00000600935	KLKP1	Q107X0	134 aa		4.72	□□□□□ -1.65
NUP62-222	ENST00000600935	TMEM256-PLSCR3	K7ERE1	68 aa		4.71	□□□□□ -1.66
NUP62-222	ENST00000600935	LCE3B	Q5TA77	95 aa		4.71	□□□□□ -1.66
NUP62-222	ENST00000600935	IGKV2D-30	A0A075B6S6	120 aa		4.7	□□□□□ -1.66
NUP62-222	ENST00000600935	HSBP1L1	C9JCN9	74 aa		4.7	□□□□□ -1.66
NUP62-222	ENST00000600935	IGKV2-30	P06310	120 aa		4.7	□□□□□ -1.66
NUP62-222	ENST00000600935		Q6ZQT0	140 aa		4.7	□□□□□ -1.66
NUP62-222	ENST00000600935		H3BQ85	93 aa		4.69	□□□□□ -1.66
NUP62-222	ENST00000600935	DNAL4	O96015	105 aa		4.69	□□□□□ -1.66
NUP62-222	ENST00000600935	C4orf26	Q17RF5	130 aa		4.69	□□□□□ -1.66
NUP62-222	ENST00000600935	C2orf91	Q6ZV80	131 aa		4.69	□□□□□ -1.66
NUP62-222	ENST00000600935	COX8A	P10176	69 aa		4.68	□□□□□ -1.66
NUP62-222	ENST00000600935	UBE2V1	Q13404	147 aa		4.68	□□□□□ -1.66
NUP62-222	ENST00000600935	KRTAP3-1	Q9BYR8	98 aa		4.68	□□□□□ -1.66
NUP62-222	ENST00000600935	MMP24-AS1	A0A0U1RRL7	71 aa		4.67	□□□□□ -1.66
NUP62-222	ENST00000600935		Q5W150	140 aa		4.67	□□□□□ -1.66
NUP62-222	ENST00000600935	C7orf65	Q6ZTY9	151 aa		4.67	□□□□□ -1.66
NUP62-222	ENST00000600935	PRO1854	Q9UHT4	67 aa		4.67	□□□□□ -1.66
NUP62-222	ENST00000600935	DST	Q03001	7570 aa	Known RBP	4.67	□□□□□ -1.66
NUP62-222	ENST00000600935	DLEU1	O43261	78 aa		4.66	□□□□□ -1.66
NUP62-222	ENST00000600935	S100A2	P29034	98 aa		4.66	□□□□□ -1.66
NUP62-222	ENST00000600935	MT1X	P80297	61 aa		4.66	□□□□□ -1.66
NUP62-222	ENST00000600935	RBM3	P98179	157 aa	Known RBP	4.66	□□□□□ -1.66
NUP62-222	ENST00000600935	TMEM254	Q8TBM7	123 aa		4.66	□□□□□ -1.66
NUP62-222	ENST00000600935	MRPL34	Q9BQ48	92 aa	Known RBP	4.66	□□□□□ -1.66
NUP62-222	ENST00000600935	CSAG1	Q6PB30	78 aa		4.65	□□□□□ -1.67
NUP62-222	ENST00000600935	LCA10	Q71F78	164 aa		4.65	□□□□□ -1.67
NUP62-222	ENST00000600935	PRR15	Q8IV56	129 aa		4.65	□□□□□ -1.67
NUP62-222	ENST00000600935	CEND1	Q8N111	149 aa		4.64	□□□□□ -1.67
NUP62-222	ENST00000600935	HIST1H2BL	Q99880	126 aa		4.64	□□□□□ -1.67
NUP62-222	ENST00000600935		S4R3F8	94 aa		4.64	□□□□□ -1.67
NUP62-222	ENST00000600935	LOC105371267	A0A1B0GV96	52 aa		4.63	□□□□□ -1.67
NUP62-222	ENST00000600935	HIGD1B	Q9P298	99 aa		4.63	□□□□□ -1.67
NUP62-222	ENST00000600935	KRTAP4-8	A0A0G2JLE6	195 aa		4.61	□□□□□ -1.67
NUP62-222	ENST00000600935	FXYD2	P54710	66 aa		4.61	□□□□□ -1.67
NUP62-222	ENST00000600935	KRTAP12-2	P59991	146 aa		4.61	□□□□□ -1.67
NUP62-222	ENST00000600935	HIST3H2BB	Q8N257	126 aa		4.61	□□□□□ -1.67
NUP62-222	ENST00000600935	KRTAP4-8	Q9BYQ9	185 aa		4.61	□□□□□ -1.67
NUP62-222	ENST00000600935	C14orf144	Q96I85	54 aa		4.6	□□□□□ -1.67
NUP62-222	ENST00000600935		C9JAW5	83 aa		4.59	□□□□□ -1.67
NUP62-222	ENST00000600935	NDUFS5	O43920	106 aa		4.59	□□□□□ -1.67
NUP62-222	ENST00000600935	CRIPT	Q9P021	101 aa		4.59	□□□□□ -1.67
NUP62-222	ENST00000600935	hDV103S1	A0JD37	113 aa		4.58	□□□□□ -1.68
NUP62-222	ENST00000600935	PRO2289	Q9P1D8	64 aa		4.57	□□□□□ -1.68
NUP62-222	ENST00000600935		K7ERJ3	54 aa		4.55	□□□□□ -1.68
NUP62-222	ENST00000600935	PSMB2	P49721	201 aa		4.55	□□□□□ -1.68
NUP62-222	ENST00000600935		K7EQZ3	153 aa		4.54	□□□□□ -1.68
NUP62-222	ENST00000600935	KRTAP4-9	Q9BYQ8	210 aa		4.54	□□□□□ -1.68
NUP62-222	ENST00000600935		A0A1B0GW54	56 aa		4.53	□□□□□ -1.68
NUP62-222	ENST00000600935		H3BS24	57 aa		4.53	□□□□□ -1.68
NUP62-222	ENST00000600935	COX6C	P09669	75 aa		4.52	□□□□□ -1.69
NUP62-222	ENST00000600935	SMIM6	P0DI80	62 aa		4.52	□□□□□ -1.69
NUP62-222	ENST00000600935	C1orf64	Q8NEQ6	169 aa		4.52	□□□□□ -1.69
NUP62-222	ENST00000600935	LOC110117498	A0A087WWA1	95 aa		4.5	□□□□□ -1.69
NUP62-222	ENST00000600935	BAALC-AS2	P0C853	105 aa		4.5	□□□□□ -1.69
NUP62-222	ENST00000600935	PAM16	Q9Y3D7	125 aa		4.5	□□□□□ -1.69
NUP62-222	ENST00000600935	SPATA45	Q537H7	98 aa		4.49	□□□□□ -1.69
NUP62-222	ENST00000600935	PYY3	Q5JQD4	70 aa		4.49	□□□□□ -1.69
NUP62-222	ENST00000600935	PCP4L1	A6NKN8	68 aa		4.48	□□□□□ -1.69
NUP62-222	ENST00000600935	NREP	Q16612	68 aa		4.47	□□□□□ -1.69
NUP62-222	ENST00000600935	VAMP8	Q9BV40	100 aa		4.47	□□□□□ -1.69
NUP62-222	ENST00000600935	HMCN1	Q96RW7	5635 aa		4.46	□□□□□ -1.69
NUP62-222	ENST00000600935	HCG22	E2RYF7	251 aa		4.46	□□□□□ -1.7
NUP62-222	ENST00000600935	TSTD3	H0UI37	97 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms