RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 HIST1H4GQ99525 98 aa4.67□□□□□ -1.66
TRIM28-210ENST00000597618 A0A1B0GX51 115 aa4.66□□□□□ -1.66
TRIM28-210ENST00000597618 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
TRIM28-210ENST00000597618 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
TRIM28-210ENST00000597618 TRACP01848 142 aa4.65□□□□□ -1.67
TRIM28-210ENST00000597618 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.67
TRIM28-210ENST00000597618 CCKP06307 115 aa4.64□□□□□ -1.67
TRIM28-210ENST00000597618 HIGD1BQ9P298 99 aa4.64□□□□□ -1.67
TRIM28-210ENST00000597618 A0A1B0GV72 72 aa4.63□□□□□ -1.67
TRIM28-210ENST00000597618 LYRM7Q5U5X0 104 aa4.63□□□□□ -1.67
TRIM28-210ENST00000597618 TMEM238LA0A1B0GVL6 79 aa4.62□□□□□ -1.67
TRIM28-210ENST00000597618 MT1BP07438 61 aa4.62□□□□□ -1.67
TRIM28-210ENST00000597618 Q5VV11 94 aa4.62□□□□□ -1.67
TRIM28-210ENST00000597618 C14orf144Q96I85 54 aa4.62□□□□□ -1.67
TRIM28-210ENST00000597618 DSCR8Q96T75 97 aa4.62□□□□□ -1.67
TRIM28-210ENST00000597618 A0A0B4J2C4 111 aa4.61□□□□□ -1.67
TRIM28-210ENST00000597618 H3BQ85 93 aa4.6□□□□□ -1.67
TRIM28-210ENST00000597618 J3KT08 172 aa4.6□□□□□ -1.67
TRIM28-210ENST00000597618 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
TRIM28-210ENST00000597618 SPATA45Q537H7 98 aa4.6□□□□□ -1.67
TRIM28-210ENST00000597618 C2orf91Q6ZV80 131 aa4.6□□□□□ -1.67
TRIM28-210ENST00000597618 ORMDL1Q9P0S3 153 aa4.59□□□□□ -1.67
TRIM28-210ENST00000597618 PAM16Q9Y3D7 125 aa4.59□□□□□ -1.67
TRIM28-210ENST00000597618 IGKV3D-7A0A0C4DH55 119 aa4.58□□□□□ -1.68
TRIM28-210ENST00000597618 DNAL4O96015 105 aa4.58□□□□□ -1.68
TRIM28-210ENST00000597618 CEND1Q8N111 149 aa4.58□□□□□ -1.68
TRIM28-210ENST00000597618 VAMP8Q9BV40 100 aa4.58□□□□□ -1.68
TRIM28-210ENST00000597618 NDUFB1O75438 58 aa4.57□□□□□ -1.68
TRIM28-210ENST00000597618 KRTAP19-8Q3LI54 63 aa4.57□□□□□ -1.68
TRIM28-210ENST00000597618 PRO1854Q9UHT4 67 aa4.57□□□□□ -1.68
TRIM28-210ENST00000597618 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
TRIM28-210ENST00000597618 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
TRIM28-210ENST00000597618 TMEM256-PLSCR3K7ERE1 68 aa4.56□□□□□ -1.68
TRIM28-210ENST00000597618 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
TRIM28-210ENST00000597618 C8orf17Q9NRJ1 99 aa4.55□□□□□ -1.68
TRIM28-210ENST00000597618 TRIAP1O43715 76 aa4.54□□□□□ -1.68
TRIM28-210ENST00000597618 FXYD2P54710 66 aa4.54□□□□□ -1.68
TRIM28-210ENST00000597618 C21orf62-AS1Q17RA5 79 aa4.54□□□□□ -1.68
TRIM28-210ENST00000597618 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
TRIM28-210ENST00000597618 UBE2V1Q13404 147 aa4.52□□□□□ -1.69
TRIM28-210ENST00000597618 Q6ZVQ6 151 aa4.52□□□□□ -1.69
TRIM28-210ENST00000597618 SPRR2EP22531 72 aa4.5□□□□□ -1.69
TRIM28-210ENST00000597618 SPRR2BP35325 72 aa4.5□□□□□ -1.69
TRIM28-210ENST00000597618 SPRR2AP35326 72 aa4.5□□□□□ -1.69
TRIM28-210ENST00000597618 HSD52Q0P140 79 aa4.5□□□□□ -1.69
TRIM28-210ENST00000597618 PYY3Q5JQD4 70 aa4.5□□□□□ -1.69
TRIM28-210ENST00000597618 RBM3P98179 157 aaKnown RBP4.49□□□□□ -1.69
TRIM28-210ENST00000597618 Q6ZQT0 140 aa4.49□□□□□ -1.69
TRIM28-210ENST00000597618 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
TRIM28-210ENST00000597618 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
TRIM28-210ENST00000597618 COX6CP09669 75 aa4.48□□□□□ -1.69
TRIM28-210ENST00000597618 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
TRIM28-210ENST00000597618 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
TRIM28-210ENST00000597618 PSMB2P49721 201 aa4.47□□□□□ -1.69
TRIM28-210ENST00000597618 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
TRIM28-210ENST00000597618 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.7
TRIM28-210ENST00000597618 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
TRIM28-210ENST00000597618 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
TRIM28-210ENST00000597618 C9JAW5 83 aa4.45□□□□□ -1.7
TRIM28-210ENST00000597618 K7ERJ3 54 aa4.45□□□□□ -1.7
TRIM28-210ENST00000597618 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
TRIM28-210ENST00000597618 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
TRIM28-210ENST00000597618 UQCR10Q9UDW1 63 aa4.45□□□□□ -1.7
TRIM28-210ENST00000597618 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
TRIM28-210ENST00000597618 PRR15Q8IV56 129 aa4.43□□□□□ -1.7
TRIM28-210ENST00000597618 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
TRIM28-210ENST00000597618 NDUFS5O43920 106 aa4.42□□□□□ -1.7
TRIM28-210ENST00000597618 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
TRIM28-210ENST00000597618 SCGB1C2P0DMR2 95 aa4.41□□□□□ -1.7
TRIM28-210ENST00000597618 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
TRIM28-210ENST00000597618 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
TRIM28-210ENST00000597618 A0A1B0GW54 56 aa4.4□□□□□ -1.71
TRIM28-210ENST00000597618 S4R3F8 94 aa4.4□□□□□ -1.71
TRIM28-210ENST00000597618 hDV103S1A0JD37 113 aa4.39□□□□□ -1.71
TRIM28-210ENST00000597618 BAALC-AS2P0C853 105 aa4.39□□□□□ -1.71
TRIM28-210ENST00000597618 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
TRIM28-210ENST00000597618 SPRR2DP22532 72 aa4.37□□□□□ -1.71
TRIM28-210ENST00000597618 Q5W150 140 aa4.37□□□□□ -1.71
TRIM28-210ENST00000597618 TMA7Q9Y2S6 64 aaKnown RBP4.36□□□□□ -1.71
TRIM28-210ENST00000597618 LOC110117498A0A087WWA1 95 aa4.35□□□□□ -1.71
TRIM28-210ENST00000597618 LCA10Q71F78 164 aa4.35□□□□□ -1.71
TRIM28-210ENST00000597618 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
TRIM28-210ENST00000597618 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
TRIM28-210ENST00000597618 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
TRIM28-210ENST00000597618 K7EQZ3 153 aa4.33□□□□□ -1.72
TRIM28-210ENST00000597618 PDE6GP18545 87 aa4.33□□□□□ -1.72
TRIM28-210ENST00000597618 NREPQ16612 68 aa4.33□□□□□ -1.72
TRIM28-210ENST00000597618 M0R143 59 aa4.32□□□□□ -1.72
TRIM28-210ENST00000597618 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
TRIM28-210ENST00000597618 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
TRIM28-210ENST00000597618 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
TRIM28-210ENST00000597618 C1orf64Q8NEQ6 169 aa4.29□□□□□ -1.72
TRIM28-210ENST00000597618 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
TRIM28-210ENST00000597618 HCG22E2RYF7 251 aa4.27□□□□□ -1.73
TRIM28-210ENST00000597618 CXCL6P80162 114 aa4.27□□□□□ -1.73
TRIM28-210ENST00000597618 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
TRIM28-210ENST00000597618 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
TRIM28-210ENST00000597618 SMIM6P0DI80 62 aa4.26□□□□□ -1.73
TRIM28-210ENST00000597618 MT1XP80297 61 aa4.25□□□□□ -1.73
TRIM28-210ENST00000597618 CASC2Q6XLA1 102 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms