RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 Q6ZQT0 140 aa9.04□□□□□ -0.96
CHMP2A-203ENST00000597209 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
CHMP2A-203ENST00000597209 ATXN8Q156A1 80 aa9.03□□□□□ -0.96
CHMP2A-203ENST00000597209 A0A1B0GW54 56 aa9.02□□□□□ -0.97
CHMP2A-203ENST00000597209 JMJD7-PLA2G4BH0Y9G9 81 aa9.02□□□□□ -0.97
CHMP2A-203ENST00000597209 HRES1P13985 223 aa9.02□□□□□ -0.97
CHMP2A-203ENST00000597209 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
CHMP2A-203ENST00000597209 RBM12B-AS1Q9P1G2 102 aa9.01□□□□□ -0.97
CHMP2A-203ENST00000597209 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
CHMP2A-203ENST00000597209 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
CHMP2A-203ENST00000597209 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
CHMP2A-203ENST00000597209 NDUFB1O75438 58 aa8.97□□□□□ -0.97
CHMP2A-203ENST00000597209 PDE6GP18545 87 aa8.97□□□□□ -0.97
CHMP2A-203ENST00000597209 NAA38Q9BRA0 125 aaKnown RBP8.97□□□□□ -0.97
CHMP2A-203ENST00000597209 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
CHMP2A-203ENST00000597209 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
CHMP2A-203ENST00000597209 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
CHMP2A-203ENST00000597209 A8MWP4 228 aa8.92□□□□□ -0.98
CHMP2A-203ENST00000597209 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
CHMP2A-203ENST00000597209 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
CHMP2A-203ENST00000597209 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
CHMP2A-203ENST00000597209 C14orf132Q9NPU4 83 aa8.89□□□□□ -0.99
CHMP2A-203ENST00000597209 SPINK7P58062 85 aa8.88□□□□□ -0.99
CHMP2A-203ENST00000597209 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
CHMP2A-203ENST00000597209 MT2AP02795 61 aa8.86□□□□□ -0.99
CHMP2A-203ENST00000597209 TSTD3H0UI37 97 aa8.85□□□□□ -0.99
CHMP2A-203ENST00000597209 NREPQ16612 68 aa8.83□□□□□ -1
CHMP2A-203ENST00000597209 PRR15Q8IV56 129 aa8.83□□□□□ -1
CHMP2A-203ENST00000597209 Q6ZVQ6 151 aa8.82□□□□□ -1
CHMP2A-203ENST00000597209 BATFQ16520 125 aa8.8□□□□□ -1
CHMP2A-203ENST00000597209 H3BT86 120 aa8.79□□□□□ -1
CHMP2A-203ENST00000597209 USH2AO75445 5202 aa8.78□□□□□ -1
CHMP2A-203ENST00000597209 C9orf118A6NHY6 69 aa8.78□□□□□ -1
CHMP2A-203ENST00000597209 MT1FP04733 61 aa8.78□□□□□ -1
CHMP2A-203ENST00000597209 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
CHMP2A-203ENST00000597209 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
CHMP2A-203ENST00000597209 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
CHMP2A-203ENST00000597209 TAX1BP3O14907 124 aa8.74□□□□□ -1.01
CHMP2A-203ENST00000597209 A0A1W2PPM0 123 aa8.73□□□□□ -1.01
CHMP2A-203ENST00000597209 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
CHMP2A-203ENST00000597209 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
CHMP2A-203ENST00000597209 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
CHMP2A-203ENST00000597209 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
CHMP2A-203ENST00000597209 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
CHMP2A-203ENST00000597209 K7EQZ3 153 aa8.7□□□□□ -1.02
CHMP2A-203ENST00000597209 LCE2BO14633 110 aa8.69□□□□□ -1.02
CHMP2A-203ENST00000597209 LOC105371267A0A1B0GV96 52 aa8.68□□□□□ -1.02
CHMP2A-203ENST00000597209 BPY2O14599 106 aa8.66□□□□□ -1.02
CHMP2A-203ENST00000597209 NDUFS5O43920 106 aa8.62□□□□□ -1.03
CHMP2A-203ENST00000597209 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
CHMP2A-203ENST00000597209 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
CHMP2A-203ENST00000597209 SPCS1Q9Y6A9 102 aa8.59□□□□□ -1.03
CHMP2A-203ENST00000597209 Q5W150 140 aa8.57□□□□□ -1.04
CHMP2A-203ENST00000597209 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
CHMP2A-203ENST00000597209 SMCPP49901 116 aaPredicted RBP8.56□□□□□ -1.04
CHMP2A-203ENST00000597209 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
CHMP2A-203ENST00000597209 C7orf65Q6ZTY9 151 aa8.55□□□□□ -1.04
CHMP2A-203ENST00000597209 FCGBPQ9Y6R7 5405 aaPredicted RBP8.54□□□□□ -1.04
CHMP2A-203ENST00000597209 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
CHMP2A-203ENST00000597209 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
CHMP2A-203ENST00000597209 Q8N9L7 120 aa8.53□□□□□ -1.04
CHMP2A-203ENST00000597209 KRTAP9-7A8MTY7 169 aa8.52□□□□□ -1.05
CHMP2A-203ENST00000597209 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
CHMP2A-203ENST00000597209 CXCL6P80162 114 aa8.49□□□□□ -1.05
CHMP2A-203ENST00000597209 COL5A1-AS1Q5SY13 56 aa8.49□□□□□ -1.05
CHMP2A-203ENST00000597209 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
CHMP2A-203ENST00000597209 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
CHMP2A-203ENST00000597209 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
CHMP2A-203ENST00000597209 K7EP34 96 aa8.44□□□□□ -1.06
CHMP2A-203ENST00000597209 KRTAP19-6Q3LI70 58 aa8.43□□□□□ -1.06
CHMP2A-203ENST00000597209 C4orf26Q17RF5 130 aa8.4□□□□□ -1.06
CHMP2A-203ENST00000597209 GTF2H5Q6ZYL4 71 aa8.33□□□□□ -1.08
CHMP2A-203ENST00000597209 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
CHMP2A-203ENST00000597209 F8W1H4 67 aa8.31□□□□□ -1.08
CHMP2A-203ENST00000597209 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
CHMP2A-203ENST00000597209 ETDBQ3ZM63 59 aa8.25□□□□□ -1.09
CHMP2A-203ENST00000597209 C5orf47Q569G3 176 aa8.25□□□□□ -1.09
CHMP2A-203ENST00000597209 C1orf64Q8NEQ6 169 aa8.25□□□□□ -1.09
CHMP2A-203ENST00000597209 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
CHMP2A-203ENST00000597209 S4R3F8 94 aa8.24□□□□□ -1.09
CHMP2A-203ENST00000597209 CSAG1Q6PB30 78 aa8.21□□□□□ -1.1
CHMP2A-203ENST00000597209 SYNE2Q8WXH0 6885 aaKnown RBP8.18□□□□□ -1.1
CHMP2A-203ENST00000597209 LCA10Q71F78 164 aa8.18□□□□□ -1.1
CHMP2A-203ENST00000597209 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
CHMP2A-203ENST00000597209 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
CHMP2A-203ENST00000597209 PCP4L1A6NKN8 68 aa8.15□□□□□ -1.1
CHMP2A-203ENST00000597209 ACYP1P07311 99 aa8.14□□□□□ -1.11
CHMP2A-203ENST00000597209 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
CHMP2A-203ENST00000597209 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
CHMP2A-203ENST00000597209 TRAV22A0A0B4J277 110 aa8.09□□□□□ -1.11
CHMP2A-203ENST00000597209 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
CHMP2A-203ENST00000597209 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
CHMP2A-203ENST00000597209 FAM240AA0A1B0GVK7 77 aa8.07□□□□□ -1.12
CHMP2A-203ENST00000597209 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
CHMP2A-203ENST00000597209 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
CHMP2A-203ENST00000597209 MT1BP07438 61 aa8.06□□□□□ -1.12
CHMP2A-203ENST00000597209 KRTAP6-3Q3LI67 103 aa8.06□□□□□ -1.12
CHMP2A-203ENST00000597209 KLKP1Q107X0 134 aa8.05□□□□□ -1.12
CHMP2A-203ENST00000597209 Q5VV11 94 aa8.04□□□□□ -1.12
CHMP2A-203ENST00000597209 UQCRQO14949 82 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms