RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 A0A1B0GVX0 72 aa14.03□□□□□ -0.16
SMAD4-213ENST00000591914 LCE2DQ5TA82 110 aaPredicted RBP14.02□□□□□ -0.17
SMAD4-213ENST00000591914 J3KT08 172 aa14.01□□□□□ -0.17
SMAD4-213ENST00000591914 A0A1B0GW54 56 aa14□□□□□ -0.17
SMAD4-213ENST00000591914 PDE6GP18545 87 aa14□□□□□ -0.17
SMAD4-213ENST00000591914 KRTAP9-6A0A140TA67 174 aa13.99□□□□□ -0.17
SMAD4-213ENST00000591914 C8orf87E5RJ46 101 aa13.99□□□□□ -0.17
SMAD4-213ENST00000591914 M0R2T5 61 aa13.99□□□□□ -0.17
SMAD4-213ENST00000591914 LORP23490 312 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-213ENST00000591914 KRTAP10-6P60371 365 aaPredicted RBP13.99□□□□□ -0.17
SMAD4-213ENST00000591914 C9orf118A6NHY6 69 aa13.96□□□□□ -0.17
SMAD4-213ENST00000591914 C14orf132Q9NPU4 83 aa13.96□□□□□ -0.17
SMAD4-213ENST00000591914 TAX1BP3O14907 124 aa13.93□□□□□ -0.18
SMAD4-213ENST00000591914 A0A1W2PPM0 123 aa13.9□□□□□ -0.18
SMAD4-213ENST00000591914 H3BT86 120 aa13.86□□□□□ -0.19
SMAD4-213ENST00000591914 NDUFB1O75438 58 aa13.86□□□□□ -0.19
SMAD4-213ENST00000591914 A8MWP4 228 aa13.84□□□□□ -0.19
SMAD4-213ENST00000591914 MTURNQ8N3F0 131 aa13.8□□□□□ -0.2
SMAD4-213ENST00000591914 IGKV3D-7A0A0C4DH55 119 aa13.79□□□□□ -0.2
SMAD4-213ENST00000591914 NREPQ16612 68 aa13.77□□□□□ -0.21
SMAD4-213ENST00000591914 Q8N9P0 234 aaPredicted RBP13.77□□□□□ -0.21
SMAD4-213ENST00000591914 C8orf17Q9NRJ1 99 aa13.77□□□□□ -0.21
SMAD4-213ENST00000591914 HRES1P13985 223 aa13.76□□□□□ -0.21
SMAD4-213ENST00000591914 MPLKIPQ8TAP9 179 aa13.76□□□□□ -0.21
SMAD4-213ENST00000591914 ZCCHC13Q8WW36 166 aaKnown RBP13.76□□□□□ -0.21
SMAD4-213ENST00000591914 PRR15Q8IV56 129 aa13.71□□□□□ -0.21
SMAD4-213ENST00000591914 SPCS1Q9Y6A9 102 aa13.7□□□□□ -0.22
SMAD4-213ENST00000591914 FSIP2Q5CZC0 6907 aa13.7□□□□□ -0.22
SMAD4-213ENST00000591914 RBM12B-AS1Q9P1G2 102 aa13.68□□□□□ -0.22
SMAD4-213ENST00000591914 FAM236DA0A1B0GTK5 79 aa13.67□□□□□ -0.22
SMAD4-213ENST00000591914 FAM236CP0DP71 79 aa13.67□□□□□ -0.22
SMAD4-213ENST00000591914 Q6ZVQ6 151 aa13.66□□□□□ -0.22
SMAD4-213ENST00000591914 COL5A1-AS1Q5SY13 56 aa13.63□□□□□ -0.23
SMAD4-213ENST00000591914 MMP24-AS1A0A0U1RRL7 71 aa13.61□□□□□ -0.23
SMAD4-213ENST00000591914 SPINK7P58062 85 aa13.61□□□□□ -0.23
SMAD4-213ENST00000591914 SMCPP49901 116 aaPredicted RBP13.6□□□□□ -0.23
SMAD4-213ENST00000591914 K7EQZ3 153 aa13.58□□□□□ -0.24
SMAD4-213ENST00000591914 CRCT1Q9UGL9 99 aa13.58□□□□□ -0.24
SMAD4-213ENST00000591914 TMEM254Q8TBM7 123 aa13.57□□□□□ -0.24
SMAD4-213ENST00000591914 MRPL34Q9BQ48 92 aaKnown RBP13.55□□□□□ -0.24
SMAD4-213ENST00000591914 KRTAP9-8Q9BYQ0 159 aa13.55□□□□□ -0.24
SMAD4-213ENST00000591914 BPY2O14599 106 aa13.53□□□□□ -0.24
SMAD4-213ENST00000591914 PRO0461Q9UI25 63 aa13.52□□□□□ -0.25
SMAD4-213ENST00000591914 hDV103S1A0JD37 113 aa13.5□□□□□ -0.25
SMAD4-213ENST00000591914 K7EP34 96 aa13.49□□□□□ -0.25
SMAD4-213ENST00000591914 WFDC13Q8IUB5 93 aa13.41□□□□□ -0.26
SMAD4-213ENST00000591914 NDUFS5O43920 106 aa13.39□□□□□ -0.27
SMAD4-213ENST00000591914 Q8N9L7 120 aa13.39□□□□□ -0.27
SMAD4-213ENST00000591914 LINC00846Q9NV44 126 aa13.37□□□□□ -0.27
SMAD4-213ENST00000591914 MT2AP02795 61 aa13.36□□□□□ -0.27
SMAD4-213ENST00000591914 UBL5Q9BZL1 73 aa13.33□□□□□ -0.28
SMAD4-213ENST00000591914 CASC2Q6XLA1 102 aa13.32□□□□□ -0.28
SMAD4-213ENST00000591914 GTF2H5Q6ZYL4 71 aa13.32□□□□□ -0.28
SMAD4-213ENST00000591914 PCP4L1A6NKN8 68 aa13.31□□□□□ -0.28
SMAD4-213ENST00000591914 Q5W150 140 aa13.28□□□□□ -0.28
SMAD4-213ENST00000591914 F8W1H4 67 aa13.25□□□□□ -0.29
SMAD4-213ENST00000591914 MT1FP04733 61 aa13.25□□□□□ -0.29
SMAD4-213ENST00000591914 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
SMAD4-213ENST00000591914 IGKV2D-30A0A075B6S6 120 aa13.2□□□□□ -0.3
SMAD4-213ENST00000591914 IGKV2-30P06310 120 aa13.2□□□□□ -0.3
SMAD4-213ENST00000591914 C7orf65Q6ZTY9 151 aa13.19□□□□□ -0.3
SMAD4-213ENST00000591914 ETDBQ3ZM63 59 aa13.18□□□□□ -0.3
SMAD4-213ENST00000591914 CXCL6P80162 114 aa13.17□□□□□ -0.3
SMAD4-213ENST00000591914 KRTAP10-10P60014 251 aa13.16□□□□□ -0.3
SMAD4-213ENST00000591914 USH2AO75445 5202 aa13.15□□□□□ -0.3
SMAD4-213ENST00000591914 H1FX-AS1Q4G0G2 97 aa13.12□□□□□ -0.31
SMAD4-213ENST00000591914 KRTAP9-3Q9BYQ3 159 aa13.11□□□□□ -0.31
SMAD4-213ENST00000591914 LCE2BO14633 110 aa13.03□□□□□ -0.32
SMAD4-213ENST00000591914 SSPOA2VEC9 5147 aa13.01□□□□□ -0.33
SMAD4-213ENST00000591914 C4orf26Q17RF5 130 aa12.97□□□□□ -0.33
SMAD4-213ENST00000591914 TP53AIP1Q9HCN2 124 aa12.94□□□□□ -0.34
SMAD4-213ENST00000591914 ACYP1P07311 99 aa12.89□□□□□ -0.35
SMAD4-213ENST00000591914 FAM240AA0A1B0GVK7 77 aa12.85□□□□□ -0.35
SMAD4-213ENST00000591914 KRTAP3-1Q9BYR8 98 aa12.81□□□□□ -0.36
SMAD4-213ENST00000591914 ATP5EP2Q5VTU8 51 aa12.77□□□□□ -0.37
SMAD4-213ENST00000591914 KRTAP19-1Q8IUB9 90 aa12.75□□□□□ -0.37
SMAD4-213ENST00000591914 C1orf64Q8NEQ6 169 aa12.74□□□□□ -0.37
SMAD4-213ENST00000591914 FCGBPQ9Y6R7 5405 aaPredicted RBP12.73□□□□□ -0.37
SMAD4-213ENST00000591914 TRAV22A0A0B4J277 110 aa12.67□□□□□ -0.38
SMAD4-213ENST00000591914 C5orf47Q569G3 176 aa12.67□□□□□ -0.38
SMAD4-213ENST00000591914 CYP4F30PQ9H0H9 118 aa12.67□□□□□ -0.38
SMAD4-213ENST00000591914 S4R3F8 94 aa12.67□□□□□ -0.38
SMAD4-213ENST00000591914 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.65□□□□□ -0.38
SMAD4-213ENST00000591914 HIST1H4AP62805 103 aaKnown RBP12.65□□□□□ -0.38
SMAD4-213ENST00000591914 LOC101927531A0A1B0GV80 90 aa12.6□□□□□ -0.39
SMAD4-213ENST00000591914 A0A1B0GV90 55 aa12.6□□□□□ -0.39
SMAD4-213ENST00000591914 LCA10Q71F78 164 aa12.6□□□□□ -0.39
SMAD4-213ENST00000591914 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
SMAD4-213ENST00000591914 CSAG1Q6PB30 78 aa12.57□□□□□ -0.4
SMAD4-213ENST00000591914 KRTAP19-6Q3LI70 58 aa12.56□□□□□ -0.4
SMAD4-213ENST00000591914 UQCRQO14949 82 aa12.55□□□□□ -0.4
SMAD4-213ENST00000591914 KRTAP9-7A8MTY7 169 aa12.54□□□□□ -0.4
SMAD4-213ENST00000591914 A0A087WVE0 104 aa12.51□□□□□ -0.41
SMAD4-213ENST00000591914 H0Y9P7 68 aa12.48□□□□□ -0.41
SMAD4-213ENST00000591914 ATOX1O00244 68 aa12.48□□□□□ -0.41
SMAD4-213ENST00000591914 FAM236AA0A1B0GUQ0 79 aa12.45□□□□□ -0.42
SMAD4-213ENST00000591914 FAM236BA0A1B0GV22 79 aa12.45□□□□□ -0.42
SMAD4-213ENST00000591914 KRTAP3-3Q9BYR6 98 aa12.45□□□□□ -0.42
SMAD4-213ENST00000591914 MACF1Q9UPN3 7388 aaKnown RBP12.37□□□□□ -0.43
SMAD4-213ENST00000591914 OCR1Q9BZK8 76 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms