RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
RETREG3-208ENST00000589797 A0A087X002 238 aa8.69□□□□□ -1.02
RETREG3-208ENST00000589797 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
RETREG3-208ENST00000589797 AKAP9Q99996 3911 aa8.67□□□□□ -1.02
RETREG3-208ENST00000589797 Q8N1X5 172 aa8.66□□□□□ -1.02
RETREG3-208ENST00000589797 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
RETREG3-208ENST00000589797 A0A1B0GU69 56 aa8.65□□□□□ -1.03
RETREG3-208ENST00000589797 Q5XG85 94 aa8.64□□□□□ -1.03
RETREG3-208ENST00000589797 MEGF8Q7Z7M0 2845 aa8.63□□□□□ -1.03
RETREG3-208ENST00000589797 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
RETREG3-208ENST00000589797 CD164Q04900 197 aa8.57□□□□□ -1.04
RETREG3-208ENST00000589797 ATP11AUNQ6ZP68 121 aa8.56□□□□□ -1.04
RETREG3-208ENST00000589797 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
RETREG3-208ENST00000589797 KRTAP29-1A8MX34 341 aaPredicted RBP8.54□□□□□ -1.04
RETREG3-208ENST00000589797 HRES1P13985 223 aa8.54□□□□□ -1.04
RETREG3-208ENST00000589797 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
RETREG3-208ENST00000589797 LCE6AA0A183 80 aa8.51□□□□□ -1.05
RETREG3-208ENST00000589797 SPANXA2-OT1Q8N9U9 137 aa8.5□□□□□ -1.05
RETREG3-208ENST00000589797 Q5W150 140 aa8.49□□□□□ -1.05
RETREG3-208ENST00000589797 IGLV7-46A0A075B6I9 117 aa8.49□□□□□ -1.05
RETREG3-208ENST00000589797 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
RETREG3-208ENST00000589797 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.06
RETREG3-208ENST00000589797 K7ERS5 55 aa8.44□□□□□ -1.06
RETREG3-208ENST00000589797 J3QL48 77 aa8.43□□□□□ -1.06
RETREG3-208ENST00000589797 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
RETREG3-208ENST00000589797 Q5VSD8 79 aa8.38□□□□□ -1.07
RETREG3-208ENST00000589797 Q1T7F1 81 aa8.35□□□□□ -1.07
RETREG3-208ENST00000589797 UQCR11O14957 56 aa8.32□□□□□ -1.08
RETREG3-208ENST00000589797 SPINK7P58062 85 aa8.31□□□□□ -1.08
RETREG3-208ENST00000589797 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
RETREG3-208ENST00000589797 Q5VV11 94 aa8.27□□□□□ -1.08
RETREG3-208ENST00000589797 HUWE1Q7Z6Z7 4374 aaKnown RBP8.27□□□□□ -1.09
RETREG3-208ENST00000589797 A0A0D9SG42 100 aa8.25□□□□□ -1.09
RETREG3-208ENST00000589797 A8MU10 97 aa8.22□□□□□ -1.09
RETREG3-208ENST00000589797 Q6ZSA8 131 aa8.22□□□□□ -1.09
RETREG3-208ENST00000589797 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.1
RETREG3-208ENST00000589797 KRTAP1-4P0C5Y4 121 aa8.2□□□□□ -1.1
RETREG3-208ENST00000589797 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
RETREG3-208ENST00000589797 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
RETREG3-208ENST00000589797 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
RETREG3-208ENST00000589797 PRAC1Q96KF2 57 aa8.17□□□□□ -1.1
RETREG3-208ENST00000589797 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
RETREG3-208ENST00000589797 CDC42SE1Q9NRR8 79 aa8.16□□□□□ -1.1
RETREG3-208ENST00000589797 DNHD1Q96M86 4753 aa8.15□□□□□ -1.1
RETREG3-208ENST00000589797 Q75L30 129 aa8.14□□□□□ -1.11
RETREG3-208ENST00000589797 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
RETREG3-208ENST00000589797 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
RETREG3-208ENST00000589797 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
RETREG3-208ENST00000589797 DNAH10Q8IVF4 4471 aa8.08□□□□□ -1.12
RETREG3-208ENST00000589797 A0A1B0GU33 70 aa8.07□□□□□ -1.12
RETREG3-208ENST00000589797 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
RETREG3-208ENST00000589797 ANK2Q01484 3957 aa8.05□□□□□ -1.12
RETREG3-208ENST00000589797 LCA10Q71F78 164 aa8.05□□□□□ -1.12
RETREG3-208ENST00000589797 DNAH9Q9NYC9 4486 aa8.04□□□□□ -1.12
RETREG3-208ENST00000589797 PLECQ15149 4684 aaKnown RBP8.03□□□□□ -1.12
RETREG3-208ENST00000589797 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
RETREG3-208ENST00000589797 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
RETREG3-208ENST00000589797 S4R3F8 94 aa7.93□□□□□ -1.14
RETREG3-208ENST00000589797 PRKDCP78527 4128 aaKnown RBP7.9□□□□□ -1.15
RETREG3-208ENST00000589797 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
RETREG3-208ENST00000589797 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
RETREG3-208ENST00000589797 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
RETREG3-208ENST00000589797 DNAH11Q96DT5 4516 aa7.87□□□□□ -1.15
RETREG3-208ENST00000589797 H3BS24 57 aa7.85□□□□□ -1.15
RETREG3-208ENST00000589797 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
RETREG3-208ENST00000589797 STARD9Q9P2P6 4700 aa7.84□□□□□ -1.16
RETREG3-208ENST00000589797 A8MUU9 505 aa7.83□□□□□ -1.16
RETREG3-208ENST00000589797 LYSTQ99698 3801 aa7.83□□□□□ -1.16
RETREG3-208ENST00000589797 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
RETREG3-208ENST00000589797 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
RETREG3-208ENST00000589797 DNAH1Q9P2D7 4330 aa7.8□□□□□ -1.16
RETREG3-208ENST00000589797 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
RETREG3-208ENST00000589797 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
RETREG3-208ENST00000589797 M0R2T5 61 aa7.76□□□□□ -1.17
RETREG3-208ENST00000589797 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
RETREG3-208ENST00000589797 KMT2AQ03164 3969 aa7.75□□□□□ -1.17
RETREG3-208ENST00000589797 KRTAP13-3Q3SY46 172 aa7.74□□□□□ -1.17
RETREG3-208ENST00000589797 XP32Q5T750 250 aa7.74□□□□□ -1.17
RETREG3-208ENST00000589797 R4GN34 69 aa7.73□□□□□ -1.17
RETREG3-208ENST00000589797 A6NN06 94 aa7.71□□□□□ -1.18
RETREG3-208ENST00000589797 FAT1Q14517 4588 aa7.7□□□□□ -1.18
RETREG3-208ENST00000589797 DNAH5Q8TE73 4624 aa7.69□□□□□ -1.18
RETREG3-208ENST00000589797 M0QZ58 72 aa7.66□□□□□ -1.18
RETREG3-208ENST00000589797 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
RETREG3-208ENST00000589797 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
RETREG3-208ENST00000589797 LRP1BQ9NZR2 4599 aa7.6□□□□□ -1.19
RETREG3-208ENST00000589797 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
RETREG3-208ENST00000589797 VPS13DQ5THJ4 4388 aa7.59□□□□□ -1.19
RETREG3-208ENST00000589797 DNAH7Q8WXX0 4024 aa7.57□□□□□ -1.2
RETREG3-208ENST00000589797 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
RETREG3-208ENST00000589797 H0YAA0 97 aa7.49□□□□□ -1.21
RETREG3-208ENST00000589797 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
RETREG3-208ENST00000589797 ROMO1P60602 79 aa7.47□□□□□ -1.21
RETREG3-208ENST00000589797 P0C880 135 aa7.46□□□□□ -1.21
RETREG3-208ENST00000589797 DNAH2Q9P225 4427 aa7.45□□□□□ -1.22
RETREG3-208ENST00000589797 MYCBP2O75592 4640 aa7.45□□□□□ -1.22
RETREG3-208ENST00000589797 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
RETREG3-208ENST00000589797 DNAH17Q9UFH2 4485 aa7.44□□□□□ -1.22
RETREG3-208ENST00000589797 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
RETREG3-208ENST00000589797 FRAS1Q86XX4 4008 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms