RNA–Protein interactions for RNA: ENST00000589123.5

NFIC-206, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 8,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-206ENST00000589123 KRTAP29-1A8MX34 341 aaPredicted RBP7.91□□□□□ -1.14
NFIC-206ENST00000589123 LAMA1P25391 3075 aa7.89□□□□□ -1.15
NFIC-206ENST00000589123 SZT2Q5T011 3432 aa7.88□□□□□ -1.15
NFIC-206ENST00000589123 A0A1B0GVY2 172 aa7.86□□□□□ -1.15
NFIC-206ENST00000589123 SRRM2Q9UQ35 2752 aaKnown RBP7.85□□□□□ -1.15
NFIC-206ENST00000589123 CRYBG3Q68DQ2 2970 aa7.83□□□□□ -1.16
NFIC-206ENST00000589123 DMXL2Q8TDJ6 3036 aa7.81□□□□□ -1.16
NFIC-206ENST00000589123 VCANP13611 3396 aa7.81□□□□□ -1.16
NFIC-206ENST00000589123 ADGRG4Q8IZF6 3080 aa7.79□□□□□ -1.16
NFIC-206ENST00000589123 ZZEF1O43149 2961 aa7.76□□□□□ -1.17
NFIC-206ENST00000589123 ATMQ13315 3056 aa7.75□□□□□ -1.17
NFIC-206ENST00000589123 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
NFIC-206ENST00000589123 TENM3Q9P273 2699 aa7.73□□□□□ -1.17
NFIC-206ENST00000589123 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
NFIC-206ENST00000589123 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
NFIC-206ENST00000589123 COL6A3P12111 3177 aa7.69□□□□□ -1.18
NFIC-206ENST00000589123 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
NFIC-206ENST00000589123 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
NFIC-206ENST00000589123 SPEGQ15772 3267 aa7.65□□□□□ -1.18
NFIC-206ENST00000589123 Q6ZRN7 208 aaPredicted RBP7.61□□□□□ -1.19
NFIC-206ENST00000589123 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
NFIC-206ENST00000589123 EYSQ5T1H1 3165 aa7.58□□□□□ -1.2
NFIC-206ENST00000589123 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
NFIC-206ENST00000589123 CELSR1Q9NYQ6 3014 aa7.57□□□□□ -1.2
NFIC-206ENST00000589123 H0YAA0 97 aa7.56□□□□□ -1.2
NFIC-206ENST00000589123 PDZD2O15018 2839 aa7.55□□□□□ -1.2
NFIC-206ENST00000589123 TGP01266 2768 aa7.54□□□□□ -1.2
NFIC-206ENST00000589123 TACC2O95359 2948 aa7.54□□□□□ -1.2
NFIC-206ENST00000589123 CFAP47Q6ZTR5 3102 aa7.54□□□□□ -1.2
NFIC-206ENST00000589123 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
NFIC-206ENST00000589123 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
NFIC-206ENST00000589123 TENM1Q9UKZ4 2725 aa7.51□□□□□ -1.21
NFIC-206ENST00000589123 HIVEP1P15822 2718 aa7.51□□□□□ -1.21
NFIC-206ENST00000589123 WDFY3Q8IZQ1 3526 aa7.51□□□□□ -1.21
NFIC-206ENST00000589123 USP34Q70CQ2 3546 aa7.51□□□□□ -1.21
NFIC-206ENST00000589123 NF1P21359 2839 aa7.5□□□□□ -1.21
NFIC-206ENST00000589123 CELSR2Q9HCU4 2923 aa7.49□□□□□ -1.21
NFIC-206ENST00000589123 NIPBLQ6KC79 2804 aaeCLIP7.48□□□□□ -1.213e-6■■■□□ 16.4
NFIC-206ENST00000589123 DCHS2Q6V1P9 2916 aa7.45□□□□□ -1.22
NFIC-206ENST00000589123 ZFHX4Q86UP3 3567 aa7.45□□□□□ -1.22
NFIC-206ENST00000589123 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
NFIC-206ENST00000589123 XP32Q5T750 250 aa7.38□□□□□ -1.23
NFIC-206ENST00000589123 FLNCQ14315 2725 aa7.35□□□□□ -1.23
NFIC-206ENST00000589123 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
NFIC-206ENST00000589123 ASPMQ8IZT6 3477 aa7.31□□□□□ -1.24
NFIC-206ENST00000589123 ZFHX3Q15911 3703 aa7.3□□□□□ -1.24
NFIC-206ENST00000589123 KRTAP13-1Q8IUC0 172 aa7.29□□□□□ -1.24
NFIC-206ENST00000589123 LOC400499M0QZD8 3231 aa7.25□□□□□ -1.25
NFIC-206ENST00000589123 INE1O15225 51 aa7.25□□□□□ -1.25
NFIC-206ENST00000589123 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
NFIC-206ENST00000589123 TPRXLQ17RH7 258 aa7.2□□□□□ -1.26
NFIC-206ENST00000589123 DCHS1Q96JQ0 3298 aa7.19□□□□□ -1.26
NFIC-206ENST00000589123 OTOGQ6ZRI0 2925 aa7.15□□□□□ -1.26
NFIC-206ENST00000589123 TENM2Q9NT68 2774 aa7.15□□□□□ -1.26
NFIC-206ENST00000589123 LAMA5O15230 3695 aa7.12□□□□□ -1.27
NFIC-206ENST00000589123 TENM4Q6N022 2769 aa7.12□□□□□ -1.27
NFIC-206ENST00000589123 HRNRQ86YZ3 2850 aaPredicted RBP7.08□□□□□ -1.28
NFIC-206ENST00000589123 RELNP78509 3460 aa7.05□□□□□ -1.28
NFIC-206ENST00000589123 ZANQ9Y493 2812 aa7.04□□□□□ -1.28
NFIC-206ENST00000589123 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
NFIC-206ENST00000589123 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
NFIC-206ENST00000589123 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
NFIC-206ENST00000589123 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
NFIC-206ENST00000589123 KRTAP21-3Q3LHN1 58 aa6.98□□□□□ -1.29
NFIC-206ENST00000589123 VWFP04275 2813 aa6.97□□□□□ -1.29
NFIC-206ENST00000589123 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
NFIC-206ENST00000589123 DMDP11532 3685 aa6.96□□□□□ -1.29
NFIC-206ENST00000589123 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
NFIC-206ENST00000589123 FBN2P35556 2912 aa6.9□□□□□ -1.3
NFIC-206ENST00000589123 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.31
NFIC-206ENST00000589123 CSMD1Q96PZ7 3565 aa6.9□□□□□ -1.31
NFIC-206ENST00000589123 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
NFIC-206ENST00000589123 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
NFIC-206ENST00000589123 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
NFIC-206ENST00000589123 MEGF8Q7Z7M0 2845 aa6.8□□□□□ -1.32
NFIC-206ENST00000589123 MUC3AQ02505 3323 aa6.8□□□□□ -1.32
NFIC-206ENST00000589123 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
NFIC-206ENST00000589123 MXRA5Q9NR99 2828 aa6.78□□□□□ -1.32
NFIC-206ENST00000589123 CUBNO60494 3623 aa6.72□□□□□ -1.33
NFIC-206ENST00000589123 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
NFIC-206ENST00000589123 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
NFIC-206ENST00000589123 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
NFIC-206ENST00000589123 VPS13CQ709C8 3753 aa6.4□□□□□ -1.38
NFIC-206ENST00000589123 FBN1P35555 2871 aaKnown RBP6.39□□□□□ -1.39
NFIC-206ENST00000589123 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
NFIC-206ENST00000589123 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
NFIC-206ENST00000589123 FBN3Q75N90 2809 aa6.35□□□□□ -1.39
NFIC-206ENST00000589123 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
NFIC-206ENST00000589123 BSNQ9UPA5 3926 aa6.34□□□□□ -1.39
NFIC-206ENST00000589123 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
NFIC-206ENST00000589123 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
NFIC-206ENST00000589123 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
NFIC-206ENST00000589123 KRTAP12-3P60328 96 aa6.21□□□□□ -1.41
NFIC-206ENST00000589123 TRRAPQ9Y4A5 3859 aa6.17□□□□□ -1.42
NFIC-206ENST00000589123 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
NFIC-206ENST00000589123 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
NFIC-206ENST00000589123 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
NFIC-206ENST00000589123 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
NFIC-206ENST00000589123 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
NFIC-206ENST00000589123 ZNF469Q96JG9 3925 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms