RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 A0A1B0GVX0 72 aa10.91□□□□□ -0.66
DNMT1-216ENST00000588952 IGHV6-1A0A0B4J1U7 121 aa10.9□□□□□ -0.66
DNMT1-216ENST00000588952 IGKV3D-7A0A0C4DH55 119 aa10.9□□□□□ -0.66
DNMT1-216ENST00000588952 A8MWP4 228 aa10.9□□□□□ -0.66
DNMT1-216ENST00000588952 BPY2O14599 106 aa10.89□□□□□ -0.67
DNMT1-216ENST00000588952 ACYP1P07311 99 aa10.89□□□□□ -0.67
DNMT1-216ENST00000588952 MUC17Q685J3 4493 aa10.85□□□□□ -0.67
DNMT1-216ENST00000588952 K7EQZ3 153 aa10.85□□□□□ -0.67
DNMT1-216ENST00000588952 LINC00313P59037 77 aa10.84□□□□□ -0.67
DNMT1-216ENST00000588952 PRR15Q8IV56 129 aa10.84□□□□□ -0.67
DNMT1-216ENST00000588952 KRTAP16-1A8MUX0 517 aa10.83□□□□□ -0.68
DNMT1-216ENST00000588952 NDUFB1O75438 58 aa10.83□□□□□ -0.68
DNMT1-216ENST00000588952 Q8N9L7 120 aa10.83□□□□□ -0.68
DNMT1-216ENST00000588952 UBR4Q5T4S7 5183 aa10.82□□□□□ -0.68
DNMT1-216ENST00000588952 C8orf87E5RJ46 101 aa10.81□□□□□ -0.68
DNMT1-216ENST00000588952 C8orf17Q9NRJ1 99 aa10.8□□□□□ -0.68
DNMT1-216ENST00000588952 J3QR89 54 aa10.78□□□□□ -0.68
DNMT1-216ENST00000588952 MMP24-AS1A0A0U1RRL7 71 aa10.76□□□□□ -0.69
DNMT1-216ENST00000588952 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
DNMT1-216ENST00000588952 CXCL6P80162 114 aa10.75□□□□□ -0.69
DNMT1-216ENST00000588952 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
DNMT1-216ENST00000588952 A8MUU9 505 aa10.73□□□□□ -0.69
DNMT1-216ENST00000588952 Q75L30 129 aa10.73□□□□□ -0.69
DNMT1-216ENST00000588952 LINC00643Q86TS7 51 aa10.7□□□□□ -0.7
DNMT1-216ENST00000588952 K7ERU9 68 aa10.68□□□□□ -0.7
DNMT1-216ENST00000588952 SEC61BP60468 96 aaKnown RBP10.68□□□□□ -0.7
DNMT1-216ENST00000588952 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
DNMT1-216ENST00000588952 ATP5EP2Q5VTU8 51 aa10.68□□□□□ -0.7
DNMT1-216ENST00000588952 hDV103S1A0JD37 113 aa10.65□□□□□ -0.7
DNMT1-216ENST00000588952 WFDC13Q8IUB5 93 aa10.65□□□□□ -0.7
DNMT1-216ENST00000588952 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
DNMT1-216ENST00000588952 RNF213Q63HN8 5207 aa10.65□□□□□ -0.7
DNMT1-216ENST00000588952 Q8N9P0 234 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-216ENST00000588952 MRPL34Q9BQ48 92 aaKnown RBP10.63□□□□□ -0.71
DNMT1-216ENST00000588952 KRTAP4-1Q9BYQ7 146 aa10.62□□□□□ -0.71
DNMT1-216ENST00000588952 HCG22E2RYF7 251 aa10.61□□□□□ -0.71
DNMT1-216ENST00000588952 CASC2Q6XLA1 102 aa10.61□□□□□ -0.71
DNMT1-216ENST00000588952 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
DNMT1-216ENST00000588952 HIST1H4AP62805 103 aaKnown RBP10.56□□□□□ -0.72
DNMT1-216ENST00000588952 A0A087WVE0 104 aa10.54□□□□□ -0.72
DNMT1-216ENST00000588952 MUC2Q02817 5179 aa10.52□□□□□ -0.73
DNMT1-216ENST00000588952 NDUFS5O43920 106 aa10.51□□□□□ -0.73
DNMT1-216ENST00000588952 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
DNMT1-216ENST00000588952 ZCCHC13Q8WW36 166 aaKnown RBP10.5□□□□□ -0.73
DNMT1-216ENST00000588952 Q5W150 140 aa10.43□□□□□ -0.74
DNMT1-216ENST00000588952 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
DNMT1-216ENST00000588952 TP53AIP1Q9HCN2 124 aa10.32□□□□□ -0.76
DNMT1-216ENST00000588952 SPINK7P58062 85 aa10.3□□□□□ -0.76
DNMT1-216ENST00000588952 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
DNMT1-216ENST00000588952 HRES1P13985 223 aa10.26□□□□□ -0.77
DNMT1-216ENST00000588952 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
DNMT1-216ENST00000588952 OCR1Q9BZK8 76 aa10.25□□□□□ -0.77
DNMT1-216ENST00000588952 IGKV2D-30A0A075B6S6 120 aa10.23□□□□□ -0.77
DNMT1-216ENST00000588952 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
DNMT1-216ENST00000588952 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
DNMT1-216ENST00000588952 UQCRQO14949 82 aa10.23□□□□□ -0.77
DNMT1-216ENST00000588952 IGKV2-30P06310 120 aa10.23□□□□□ -0.77
DNMT1-216ENST00000588952 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
DNMT1-216ENST00000588952 TRAV22A0A0B4J277 110 aa10.2□□□□□ -0.78
DNMT1-216ENST00000588952 MPLKIPQ8TAP9 179 aa10.2□□□□□ -0.78
DNMT1-216ENST00000588952 SCGB1A1P11684 91 aa10.19□□□□□ -0.78
DNMT1-216ENST00000588952 C7orf65Q6ZTY9 151 aa10.19□□□□□ -0.78
DNMT1-216ENST00000588952 H0Y9P7 68 aa10.16□□□□□ -0.78
DNMT1-216ENST00000588952 A0A0U1RQV1 116 aa10.15□□□□□ -0.78
DNMT1-216ENST00000588952 COX6B2Q6YFQ2 88 aa10.09□□□□□ -0.79
DNMT1-216ENST00000588952 LOC101927531A0A1B0GV80 90 aa10.07□□□□□ -0.8
DNMT1-216ENST00000588952 ATOX1O00244 68 aa10.07□□□□□ -0.8
DNMT1-216ENST00000588952 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
DNMT1-216ENST00000588952 RBM12B-AS1Q9P1G2 102 aa10.07□□□□□ -0.8
DNMT1-216ENST00000588952 TRAV7A0A075B6U4 112 aa10.04□□□□□ -0.8
DNMT1-216ENST00000588952 C5orf47Q569G3 176 aa10.04□□□□□ -0.8
DNMT1-216ENST00000588952 C1orf64Q8NEQ6 169 aa10.04□□□□□ -0.8
DNMT1-216ENST00000588952 LINC00208Q96KT6 92 aa10.04□□□□□ -0.8
DNMT1-216ENST00000588952 FLGP20930 4061 aaPredicted RBP10.04□□□□□ -0.8
DNMT1-216ENST00000588952 FAM236DA0A1B0GTK5 79 aa10.03□□□□□ -0.8
DNMT1-216ENST00000588952 FAM236CP0DP71 79 aa10.03□□□□□ -0.8
DNMT1-216ENST00000588952 MP68P56378 58 aa10.03□□□□□ -0.8
DNMT1-216ENST00000588952 SMIM20Q8N5G0 67 aa10.03□□□□□ -0.8
DNMT1-216ENST00000588952 MT1HP80294 61 aa10.01□□□□□ -0.81
DNMT1-216ENST00000588952 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
DNMT1-216ENST00000588952 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
DNMT1-216ENST00000588952 H3BPC8 53 aa9.95□□□□□ -0.82
DNMT1-216ENST00000588952 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
DNMT1-216ENST00000588952 SERP2Q8N6R1 65 aa9.92□□□□□ -0.82
DNMT1-216ENST00000588952 KRTAP3-1Q9BYR8 98 aa9.92□□□□□ -0.82
DNMT1-216ENST00000588952 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
DNMT1-216ENST00000588952 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
DNMT1-216ENST00000588952 C20orf197Q8N268 126 aa9.81□□□□□ -0.84
DNMT1-216ENST00000588952 M0R2T5 61 aa9.79□□□□□ -0.84
DNMT1-216ENST00000588952 COX7CP15954 63 aa9.78□□□□□ -0.84
DNMT1-216ENST00000588952 ANAPC13Q9BS18 74 aa9.74□□□□□ -0.85
DNMT1-216ENST00000588952 KRTAP10-6P60371 365 aaPredicted RBP9.72□□□□□ -0.85
DNMT1-216ENST00000588952 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-216ENST00000588952 S4R3F8 94 aa9.67□□□□□ -0.86
DNMT1-216ENST00000588952 A8MUN3 132 aa9.65□□□□□ -0.86
DNMT1-216ENST00000588952 CYSTM1Q9H1C7 97 aa9.65□□□□□ -0.86
DNMT1-216ENST00000588952 LCA10Q71F78 164 aa9.64□□□□□ -0.87
DNMT1-216ENST00000588952 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
DNMT1-216ENST00000588952 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
DNMT1-216ENST00000588952 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms