RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SIGMAR1Q99720 223 aa4.98□□□□□ -1.61
CIRBP-218ENST00000588344 C9orf92A6NGG3 77 aa4.97□□□□□ -1.61
CIRBP-218ENST00000588344 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
CIRBP-218ENST00000588344 ETDBQ3ZM63 59 aa4.97□□□□□ -1.61
CIRBP-218ENST00000588344 A0A1B0GV90 55 aa4.96□□□□□ -1.62
CIRBP-218ENST00000588344 LINC00313P59037 77 aa4.95□□□□□ -1.62
CIRBP-218ENST00000588344 DEFB116Q30KQ4 102 aa4.95□□□□□ -1.62
CIRBP-218ENST00000588344 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
CIRBP-218ENST00000588344 C8orf87E5RJ46 101 aa4.94□□□□□ -1.62
CIRBP-218ENST00000588344 A0A1B0GVX0 72 aa4.93□□□□□ -1.62
CIRBP-218ENST00000588344 A8MWP4 228 aa4.93□□□□□ -1.62
CIRBP-218ENST00000588344 ACYP1P07311 99 aa4.93□□□□□ -1.62
CIRBP-218ENST00000588344 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
CIRBP-218ENST00000588344 BPY2O14599 106 aa4.92□□□□□ -1.62
CIRBP-218ENST00000588344 Q6ZVQ6 151 aa4.92□□□□□ -1.62
CIRBP-218ENST00000588344 Q75L30 129 aa4.92□□□□□ -1.62
CIRBP-218ENST00000588344 RPL37P61927 97 aaKnown RBP4.91□□□□□ -1.62
CIRBP-218ENST00000588344 LINC00846Q9NV44 126 aa4.91□□□□□ -1.62
CIRBP-218ENST00000588344 FAM240AA0A1B0GVK7 77 aa4.9□□□□□ -1.63
CIRBP-218ENST00000588344 PRR15Q8IV56 129 aa4.9□□□□□ -1.63
CIRBP-218ENST00000588344 C20orf166-AS1Q96NR2 134 aa4.9□□□□□ -1.63
CIRBP-218ENST00000588344 IGKV3D-7A0A0C4DH55 119 aa4.89□□□□□ -1.63
CIRBP-218ENST00000588344 DSCR10P59022 87 aa4.89□□□□□ -1.63
CIRBP-218ENST00000588344 ATP11AUNQ6ZP68 121 aa4.89□□□□□ -1.63
CIRBP-218ENST00000588344 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
CIRBP-218ENST00000588344 A8MUU9 505 aa4.88□□□□□ -1.63
CIRBP-218ENST00000588344 J3QR89 54 aa4.87□□□□□ -1.63
CIRBP-218ENST00000588344 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
CIRBP-218ENST00000588344 CXCL6P80162 114 aa4.86□□□□□ -1.63
CIRBP-218ENST00000588344 C8orf17Q9NRJ1 99 aa4.86□□□□□ -1.63
CIRBP-218ENST00000588344 MUC2Q02817 5179 aa4.85□□□□□ -1.63
CIRBP-218ENST00000588344 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
CIRBP-218ENST00000588344 PCOTHQ58A44 107 aa4.85□□□□□ -1.63
CIRBP-218ENST00000588344 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
CIRBP-218ENST00000588344 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
CIRBP-218ENST00000588344 K7EQZ3 153 aa4.83□□□□□ -1.64
CIRBP-218ENST00000588344 Q8N9P0 234 aaPredicted RBP4.83□□□□□ -1.64
CIRBP-218ENST00000588344 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
CIRBP-218ENST00000588344 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
CIRBP-218ENST00000588344 TMEM254Q8TBM7 123 aa4.82□□□□□ -1.64
CIRBP-218ENST00000588344 MMP24-AS1A0A0U1RRL7 71 aa4.81□□□□□ -1.64
CIRBP-218ENST00000588344 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
CIRBP-218ENST00000588344 LINC00643Q86TS7 51 aa4.8□□□□□ -1.64
CIRBP-218ENST00000588344 CASC2Q6XLA1 102 aa4.79□□□□□ -1.64
CIRBP-218ENST00000588344 Q8N9L7 120 aa4.78□□□□□ -1.64
CIRBP-218ENST00000588344 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
CIRBP-218ENST00000588344 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
CIRBP-218ENST00000588344 K7ERU9 68 aa4.76□□□□□ -1.65
CIRBP-218ENST00000588344 NDUFS5O43920 106 aa4.76□□□□□ -1.65
CIRBP-218ENST00000588344 WFDC13Q8IUB5 93 aa4.75□□□□□ -1.65
CIRBP-218ENST00000588344 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
CIRBP-218ENST00000588344 TP53AIP1Q9HCN2 124 aa4.73□□□□□ -1.65
CIRBP-218ENST00000588344 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
CIRBP-218ENST00000588344 SPINK7P58062 85 aa4.69□□□□□ -1.66
CIRBP-218ENST00000588344 IMUPQ9GZP8 106 aa4.67□□□□□ -1.66
CIRBP-218ENST00000588344 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
CIRBP-218ENST00000588344 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
CIRBP-218ENST00000588344 COX6B2Q6YFQ2 88 aa4.66□□□□□ -1.66
CIRBP-218ENST00000588344 Q5W150 140 aa4.65□□□□□ -1.67
CIRBP-218ENST00000588344 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
CIRBP-218ENST00000588344 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
CIRBP-218ENST00000588344 A0A087WVE0 104 aa4.63□□□□□ -1.67
CIRBP-218ENST00000588344 UQCRQO14949 82 aa4.63□□□□□ -1.67
CIRBP-218ENST00000588344 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
CIRBP-218ENST00000588344 HRES1P13985 223 aa4.62□□□□□ -1.67
CIRBP-218ENST00000588344 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
CIRBP-218ENST00000588344 IGKV2D-30A0A075B6S6 120 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 TRAV22A0A0B4J277 110 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 FAM236DA0A1B0GTK5 79 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
CIRBP-218ENST00000588344 ATOX1O00244 68 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 FAM236CP0DP71 79 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
CIRBP-218ENST00000588344 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
CIRBP-218ENST00000588344 MT-ATP8P03928 68 aa4.58□□□□□ -1.68
CIRBP-218ENST00000588344 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
CIRBP-218ENST00000588344 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
CIRBP-218ENST00000588344 C5orf47Q569G3 176 aa4.57□□□□□ -1.68
CIRBP-218ENST00000588344 MT1HP80294 61 aa4.56□□□□□ -1.68
CIRBP-218ENST00000588344 SMIM20Q8N5G0 67 aa4.56□□□□□ -1.68
CIRBP-218ENST00000588344 OCR1Q9BZK8 76 aa4.56□□□□□ -1.68
CIRBP-218ENST00000588344 H0Y9P7 68 aa4.55□□□□□ -1.68
CIRBP-218ENST00000588344 M0R2T5 61 aa4.55□□□□□ -1.68
CIRBP-218ENST00000588344 MP68P56378 58 aa4.55□□□□□ -1.68
CIRBP-218ENST00000588344 H3BPC8 53 aa4.54□□□□□ -1.68
CIRBP-218ENST00000588344 CYP4F30PQ9H0H9 118 aa4.54□□□□□ -1.68
CIRBP-218ENST00000588344 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
CIRBP-218ENST00000588344 C1orf64Q8NEQ6 169 aa4.53□□□□□ -1.68
CIRBP-218ENST00000588344 H1FX-AS1Q4G0G2 97 aa4.51□□□□□ -1.69
CIRBP-218ENST00000588344 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
CIRBP-218ENST00000588344 FAM236AA0A1B0GUQ0 79 aa4.5□□□□□ -1.69
CIRBP-218ENST00000588344 FAM236BA0A1B0GV22 79 aa4.5□□□□□ -1.69
CIRBP-218ENST00000588344 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
CIRBP-218ENST00000588344 LINC00208Q96KT6 92 aa4.5□□□□□ -1.69
CIRBP-218ENST00000588344 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
CIRBP-218ENST00000588344 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
CIRBP-218ENST00000588344 A8MUN3 132 aa4.43□□□□□ -1.7
CIRBP-218ENST00000588344 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
CIRBP-218ENST00000588344 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms