RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 A0A1B0GVX0 72 aa5.79□□□□□ -1.48
SMARCA4-213ENST00000587988 IGKV3D-7A0A0C4DH55 119 aa5.78□□□□□ -1.48
SMARCA4-213ENST00000587988 A8MWP4 228 aa5.78□□□□□ -1.48
SMARCA4-213ENST00000587988 LINC00313P59037 77 aa5.78□□□□□ -1.48
SMARCA4-213ENST00000587988 BPY2O14599 106 aa5.76□□□□□ -1.49
SMARCA4-213ENST00000587988 NDUFB1O75438 58 aa5.76□□□□□ -1.49
SMARCA4-213ENST00000587988 UBL5Q9BZL1 73 aa5.76□□□□□ -1.49
SMARCA4-213ENST00000587988 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
SMARCA4-213ENST00000587988 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
SMARCA4-213ENST00000587988 PRR15Q8IV56 129 aa5.75□□□□□ -1.49
SMARCA4-213ENST00000587988 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
SMARCA4-213ENST00000587988 K7EQZ3 153 aa5.74□□□□□ -1.49
SMARCA4-213ENST00000587988 ACYP1P07311 99 aa5.73□□□□□ -1.49
SMARCA4-213ENST00000587988 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
SMARCA4-213ENST00000587988 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
SMARCA4-213ENST00000587988 Q75L30 129 aa5.73□□□□□ -1.49
SMARCA4-213ENST00000587988 C20orf166-AS1Q96NR2 134 aa5.73□□□□□ -1.49
SMARCA4-213ENST00000587988 C8orf17Q9NRJ1 99 aa5.73□□□□□ -1.49
SMARCA4-213ENST00000587988 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
SMARCA4-213ENST00000587988 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
SMARCA4-213ENST00000587988 A8MUU9 505 aa5.72□□□□□ -1.49
SMARCA4-213ENST00000587988 Q8N9L7 120 aa5.72□□□□□ -1.49
SMARCA4-213ENST00000587988 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
SMARCA4-213ENST00000587988 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
SMARCA4-213ENST00000587988 CXCL6P80162 114 aa5.67□□□□□ -1.5
SMARCA4-213ENST00000587988 ATP11AUNQ6ZP68 121 aa5.66□□□□□ -1.5
SMARCA4-213ENST00000587988 hDV103S1A0JD37 113 aa5.65□□□□□ -1.5
SMARCA4-213ENST00000587988 J3QR89 54 aa5.65□□□□□ -1.5
SMARCA4-213ENST00000587988 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
SMARCA4-213ENST00000587988 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.5
SMARCA4-213ENST00000587988 TMEM254Q8TBM7 123 aa5.65□□□□□ -1.5
SMARCA4-213ENST00000587988 MRPL34Q9BQ48 92 aaKnown RBP5.64□□□□□ -1.51
SMARCA4-213ENST00000587988 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
SMARCA4-213ENST00000587988 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
SMARCA4-213ENST00000587988 HCG22E2RYF7 251 aa5.61□□□□□ -1.51
SMARCA4-213ENST00000587988 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
SMARCA4-213ENST00000587988 RNF213Q63HN8 5207 aa5.6□□□□□ -1.51
SMARCA4-213ENST00000587988 MUC2Q02817 5179 aa5.59□□□□□ -1.51
SMARCA4-213ENST00000587988 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.51
SMARCA4-213ENST00000587988 NDUFS5O43920 106 aa5.58□□□□□ -1.52
SMARCA4-213ENST00000587988 K7ERU9 68 aa5.57□□□□□ -1.52
SMARCA4-213ENST00000587988 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
SMARCA4-213ENST00000587988 A0A087WVE0 104 aa5.55□□□□□ -1.52
SMARCA4-213ENST00000587988 Q5W150 140 aa5.54□□□□□ -1.52
SMARCA4-213ENST00000587988 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
SMARCA4-213ENST00000587988 A0A0U1RQV1 116 aa5.49□□□□□ -1.53
SMARCA4-213ENST00000587988 MT-ATP8P03928 68 aa5.49□□□□□ -1.53
SMARCA4-213ENST00000587988 SPINK7P58062 85 aa5.49□□□□□ -1.53
SMARCA4-213ENST00000587988 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
SMARCA4-213ENST00000587988 HRES1P13985 223 aa5.48□□□□□ -1.53
SMARCA4-213ENST00000587988 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
SMARCA4-213ENST00000587988 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
SMARCA4-213ENST00000587988 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
SMARCA4-213ENST00000587988 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
SMARCA4-213ENST00000587988 MPLKIPQ8TAP9 179 aa5.43□□□□□ -1.54
SMARCA4-213ENST00000587988 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
SMARCA4-213ENST00000587988 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
SMARCA4-213ENST00000587988 COX6B2Q6YFQ2 88 aa5.41□□□□□ -1.54
SMARCA4-213ENST00000587988 C7orf65Q6ZTY9 151 aa5.41□□□□□ -1.54
SMARCA4-213ENST00000587988 UQCRQO14949 82 aa5.4□□□□□ -1.54
SMARCA4-213ENST00000587988 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
SMARCA4-213ENST00000587988 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
SMARCA4-213ENST00000587988 MT1HP80294 61 aa5.39□□□□□ -1.55
SMARCA4-213ENST00000587988 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
SMARCA4-213ENST00000587988 FAM236DA0A1B0GTK5 79 aa5.37□□□□□ -1.55
SMARCA4-213ENST00000587988 FAM236CP0DP71 79 aa5.37□□□□□ -1.55
SMARCA4-213ENST00000587988 SCGB1A1P11684 91 aa5.37□□□□□ -1.55
SMARCA4-213ENST00000587988 H0Y9P7 68 aa5.36□□□□□ -1.55
SMARCA4-213ENST00000587988 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
SMARCA4-213ENST00000587988 FAM236AA0A1B0GUQ0 79 aa5.35□□□□□ -1.55
SMARCA4-213ENST00000587988 FAM236BA0A1B0GV22 79 aa5.35□□□□□ -1.55
SMARCA4-213ENST00000587988 CYP4F30PQ9H0H9 118 aa5.34□□□□□ -1.55
SMARCA4-213ENST00000587988 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
SMARCA4-213ENST00000587988 ATOX1O00244 68 aa5.32□□□□□ -1.56
SMARCA4-213ENST00000587988 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
SMARCA4-213ENST00000587988 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
SMARCA4-213ENST00000587988 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
SMARCA4-213ENST00000587988 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
SMARCA4-213ENST00000587988 MP68P56378 58 aa5.29□□□□□ -1.56
SMARCA4-213ENST00000587988 M0R2T5 61 aa5.28□□□□□ -1.56
SMARCA4-213ENST00000587988 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
SMARCA4-213ENST00000587988 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
SMARCA4-213ENST00000587988 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
SMARCA4-213ENST00000587988 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
SMARCA4-213ENST00000587988 SMIM20Q8N5G0 67 aa5.26□□□□□ -1.57
SMARCA4-213ENST00000587988 H3BPC8 53 aa5.25□□□□□ -1.57
SMARCA4-213ENST00000587988 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
SMARCA4-213ENST00000587988 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
SMARCA4-213ENST00000587988 SERP2Q8N6R1 65 aa5.2□□□□□ -1.58
SMARCA4-213ENST00000587988 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
SMARCA4-213ENST00000587988 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
SMARCA4-213ENST00000587988 C20orf197Q8N268 126 aa5.14□□□□□ -1.59
SMARCA4-213ENST00000587988 S4R3F8 94 aa5.14□□□□□ -1.59
SMARCA4-213ENST00000587988 LCA10Q71F78 164 aa5.13□□□□□ -1.59
SMARCA4-213ENST00000587988 COX7CP15954 63 aa5.12□□□□□ -1.59
SMARCA4-213ENST00000587988 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
SMARCA4-213ENST00000587988 A8MUN3 132 aa5.1□□□□□ -1.59
SMARCA4-213ENST00000587988 MT2AP02795 61 aa5.09□□□□□ -1.59
SMARCA4-213ENST00000587988 DMAC1Q96GE9 116 aa5.09□□□□□ -1.59
SMARCA4-213ENST00000587988 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms