RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ACYP2P14621 99 aa9.75□□□□□ -0.85
RANBP3-209ENST00000587411 LYSTQ99698 3801 aa9.75□□□□□ -0.85
RANBP3-209ENST00000587411 IGLV5-52A0A0A0MRZ9 124 aa9.74□□□□□ -0.85
RANBP3-209ENST00000587411 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
RANBP3-209ENST00000587411 NBEAL1Q6ZS30 2694 aa9.73□□□□□ -0.85
RANBP3-209ENST00000587411 Q5W150 140 aa9.73□□□□□ -0.85
RANBP3-209ENST00000587411 PSORS1C2Q9UIG4 136 aa9.73□□□□□ -0.85
RANBP3-209ENST00000587411 ZNF861PO60384 105 aa9.72□□□□□ -0.85
RANBP3-209ENST00000587411 ANAPC11Q9NYG5 84 aa9.69□□□□□ -0.86
RANBP3-209ENST00000587411 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
RANBP3-209ENST00000587411 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
RANBP3-209ENST00000587411 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
RANBP3-209ENST00000587411 MGAM2Q2M2H8 2515 aa9.66□□□□□ -0.86
RANBP3-209ENST00000587411 A0A087WTM6 91 aa9.65□□□□□ -0.87
RANBP3-209ENST00000587411 DYNC2H1Q8NCM8 4307 aaKnown RBP9.64□□□□□ -0.87
RANBP3-209ENST00000587411 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
RANBP3-209ENST00000587411 RTL8CO15255 209 aa9.61□□□□□ -0.87
RANBP3-209ENST00000587411 STAB2Q8WWQ8 2551 aa9.61□□□□□ -0.87
RANBP3-209ENST00000587411 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
RANBP3-209ENST00000587411 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
RANBP3-209ENST00000587411 A0A1B0GU69 56 aa9.58□□□□□ -0.88
RANBP3-209ENST00000587411 LINC00313P59037 77 aa9.57□□□□□ -0.88
RANBP3-209ENST00000587411 SSBP3-AS1Q7Z2R9 100 aa9.57□□□□□ -0.88
RANBP3-209ENST00000587411 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
RANBP3-209ENST00000587411 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
RANBP3-209ENST00000587411 SPATA8Q6RVD6 105 aa9.54□□□□□ -0.88
RANBP3-209ENST00000587411 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
RANBP3-209ENST00000587411 CSMD3Q7Z407 3707 aa9.54□□□□□ -0.88
RANBP3-209ENST00000587411 DNAH8Q96JB1 4490 aa9.53□□□□□ -0.88
RANBP3-209ENST00000587411 H3BS24 57 aa9.53□□□□□ -0.88
RANBP3-209ENST00000587411 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
RANBP3-209ENST00000587411 COL7A1Q02388 2944 aa9.52□□□□□ -0.88
RANBP3-209ENST00000587411 DNAH7Q8WXX0 4024 aa9.51□□□□□ -0.89
RANBP3-209ENST00000587411 PLECQ15149 4684 aaKnown RBP9.49□□□□□ -0.89
RANBP3-209ENST00000587411 UQCR11O14957 56 aa9.47□□□□□ -0.89
RANBP3-209ENST00000587411 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.89
RANBP3-209ENST00000587411 PRAC1Q96KF2 57 aa9.46□□□□□ -0.89
RANBP3-209ENST00000587411 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
RANBP3-209ENST00000587411 VPS13DQ5THJ4 4388 aa9.41□□□□□ -0.9
RANBP3-209ENST00000587411 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
RANBP3-209ENST00000587411 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
RANBP3-209ENST00000587411 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
RANBP3-209ENST00000587411 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
RANBP3-209ENST00000587411 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
RANBP3-209ENST00000587411 LINC01554Q52M75 96 aa9.35□□□□□ -0.91
RANBP3-209ENST00000587411 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
RANBP3-209ENST00000587411 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
RANBP3-209ENST00000587411 KRTAP13-2Q52LG2 175 aa9.33□□□□□ -0.92
RANBP3-209ENST00000587411 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
RANBP3-209ENST00000587411 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
RANBP3-209ENST00000587411 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
RANBP3-209ENST00000587411 A0A0A0MQY5 61 aa9.2□□□□□ -0.94
RANBP3-209ENST00000587411 FBN3Q75N90 2809 aa9.18□□□□□ -0.94
RANBP3-209ENST00000587411 CSAG1Q6PB30 78 aa9.18□□□□□ -0.94
RANBP3-209ENST00000587411 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
RANBP3-209ENST00000587411 KRTAP1-4P0C5Y4 121 aa9.17□□□□□ -0.94
RANBP3-209ENST00000587411 SPINK1P00995 79 aa9.15□□□□□ -0.94
RANBP3-209ENST00000587411 KRTAP10-2P60368 255 aa9.15□□□□□ -0.95
RANBP3-209ENST00000587411 MEGF8Q7Z7M0 2845 aa9.14□□□□□ -0.95
RANBP3-209ENST00000587411 LY6G6CO95867 125 aa9.14□□□□□ -0.95
RANBP3-209ENST00000587411 KMT2AQ03164 3969 aa9.13□□□□□ -0.95
RANBP3-209ENST00000587411 Q6ZSA8 131 aa9.13□□□□□ -0.95
RANBP3-209ENST00000587411 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
RANBP3-209ENST00000587411 Q8N1X5 172 aa9.12□□□□□ -0.95
RANBP3-209ENST00000587411 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
RANBP3-209ENST00000587411 TGP01266 2768 aa9.06□□□□□ -0.96
RANBP3-209ENST00000587411 KRTAP10-1P60331 282 aa9.06□□□□□ -0.96
RANBP3-209ENST00000587411 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
RANBP3-209ENST00000587411 A8MUU9 505 aa9.03□□□□□ -0.96
RANBP3-209ENST00000587411 H0YAA0 97 aa9.03□□□□□ -0.96
RANBP3-209ENST00000587411 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
RANBP3-209ENST00000587411 DNAH6Q9C0G6 4158 aa9.02□□□□□ -0.97
RANBP3-209ENST00000587411 A0A1B0GU33 70 aa8.98□□□□□ -0.97
RANBP3-209ENST00000587411 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
RANBP3-209ENST00000587411 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
RANBP3-209ENST00000587411 J3QL48 77 aa8.94□□□□□ -0.98
RANBP3-209ENST00000587411 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
RANBP3-209ENST00000587411 H1FX-AS1Q4G0G2 97 aa8.94□□□□□ -0.98
RANBP3-209ENST00000587411 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
RANBP3-209ENST00000587411 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
RANBP3-209ENST00000587411 PKD1P98161 4303 aa8.83□□□□□ -1
RANBP3-209ENST00000587411 K7ERS5 55 aa8.83□□□□□ -1
RANBP3-209ENST00000587411 VPS13BQ7Z7G8 4022 aa8.82□□□□□ -1
RANBP3-209ENST00000587411 C9orf92A6NGG3 77 aa8.81□□□□□ -1
RANBP3-209ENST00000587411 ROMO1P60602 79 aa8.76□□□□□ -1.01
RANBP3-209ENST00000587411 FAT2Q9NYQ8 4349 aa8.75□□□□□ -1.01
RANBP3-209ENST00000587411 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
RANBP3-209ENST00000587411 SACSQ9NZJ4 4579 aa8.73□□□□□ -1.01
RANBP3-209ENST00000587411 KRTAP21-3Q3LHN1 58 aa8.72□□□□□ -1.01
RANBP3-209ENST00000587411 HYDINQ4G0P3 5121 aa8.63□□□□□ -1.03
RANBP3-209ENST00000587411 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
RANBP3-209ENST00000587411 RPL37P61927 97 aaKnown RBP8.59□□□□□ -1.03
RANBP3-209ENST00000587411 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
RANBP3-209ENST00000587411 SMR3BP02814 79 aaPredicted RBP8.57□□□□□ -1.04
RANBP3-209ENST00000587411 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
RANBP3-209ENST00000587411 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
RANBP3-209ENST00000587411 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
RANBP3-209ENST00000587411 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
RANBP3-209ENST00000587411 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
RANBP3-209ENST00000587411 P0C880 135 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms