RNA–Protein interactions for RNA: ENST00000586315.1

ATP6V0A1-210, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-210	ENST00000586315	UMAD1	C9J7I0	102 aa		-1.3	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	NDUFA4	O00483	81 aa		-1.3	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	SNHG12	Q9BXW3	62 aa		-1.3	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	PLCH1	Q4KWH8	1693 aa		-1.3	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	MT1X	P80297	61 aa		-1.31	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	RABAC1	Q9UI14	185 aa		-1.31	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	URB2	Q14146	1524 aa	Known RBP	-1.31	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	LRBA	P50851	2863 aa		-1.32	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	SMR3B	P02814	79 aa	Predicted RBP	-1.32	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	SNRPF	P62306	86 aa	Known RBP	-1.32	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	LINC00643	Q86TS7	51 aa		-1.32	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	PARP4	Q9UKK3	1724 aa	Known RBP	-1.32	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	PIK3C2B	O00750	1634 aa		-1.33	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	CCNB3	Q8WWL7	1395 aa		-1.33	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	PRUNE2	Q8WUY3	3088 aa		-1.33	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	SPTAN1	Q13813	2472 aa	Known RBP	-1.33	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	CLPSL2	Q6UWE3	100 aa		-1.33	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	ITSN1	Q15811	1721 aa		-1.33	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	TOGARAM1	Q9Y4F4	1720 aa		-1.34	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	MT1B	P07438	61 aa		-1.34	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	S100A16	Q96FQ6	103 aa	Known RBP	-1.34	□□□□□ -2.62
ATP6V0A1-210	ENST00000586315	PKIA	P61925	76 aa		-1.35	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	NREP	Q16612	68 aa		-1.35	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	-1.35	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	DNAH8	Q96JB1	4490 aa		-1.35	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	RICTOR	Q6R327	1708 aa		-1.35	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	TNP1	P09430	55 aa		-1.36	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	PYY3	Q5JQD4	70 aa		-1.36	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	KIF14	Q15058	1648 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	TJP1	Q07157	1748 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	ATM	Q13315	3056 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	MMP24-AS1	A0A0U1RRL7	71 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	ITSN2	Q9NZM3	1697 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	FREM2	Q5SZK8	3169 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	CCDC88B	A6NC98	1476 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	CDC42BPA	Q5VT25	1732 aa		-1.37	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	DNAH10	Q8IVF4	4471 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	PEG3	Q9GZU2	1588 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	ZC3H13	Q5T200	1668 aa	Known RBP	-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	KIAA0586	Q9BVV6	1533 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	IGLV5-48	A0A075B6I7	105 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	DEFB131B	A0A096LNP1	70 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	WT1-AS	Q06250	92 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315		Q9H521	79 aa		-1.38	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	CFAP43	Q8NDM7	1665 aa		-1.39	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	VPS8	Q8N3P4	1428 aa		-1.39	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	-1.39	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	S100A8	P05109	93 aa		-1.39	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	SPTBN5	Q9NRC6	3674 aa	Known RBP	-1.4	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	CENPE	Q02224	2701 aa		-1.4	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	LY75	O60449	1722 aa		-1.4	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	MAP3K4	Q9Y6R4	1608 aa		-1.4	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	KIF1A	Q12756	1690 aa		-1.41	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315	THOC2	Q8NI27	1593 aa	Known RBP	-1.41	□□□□□ -2.63
ATP6V0A1-210	ENST00000586315		A0A087WXM4	84 aa		-1.41	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	MRPL33	O75394	65 aa	Known RBP	-1.41	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	CRIP1	P50238	77 aa		-1.41	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	KRTAP8-1	Q8IUC2	63 aa		-1.41	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	PPL	O60437	1756 aa		-1.42	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	NRAP	Q86VF7	1730 aa		-1.42	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	PVALEF	A0A1B0GWK0	134 aa		-1.42	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	MT1E	P04732	61 aa		-1.42	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	RPS27	P42677	84 aa	Known RBP	-1.42	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	RPS27L	Q71UM5	84 aa	Known RBP	-1.42	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	ABCC3	O15438	1527 aa		-1.43	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	ATP5EP2	Q5VTU8	51 aa		-1.43	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	MGA	Q8IWI9	3026 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	KANTR	A0A1W2PQU2	76 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	SMIM13	P0DJ93	91 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	TDRG1	Q3Y452	100 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	MINOS1	Q5TGZ0	78 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315		V9GYS6	101 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	HFM1	A2PYH4	1435 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	DMD	P11532	3685 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	ARHGAP35	Q9NRY4	1499 aa		-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	RNF17	Q9BXT8	1623 aa	Known RBP	-1.44	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	SPEG	Q15772	3267 aa		-1.45	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	UBL5	Q9BZL1	73 aa		-1.45	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	KCNQ1DN	Q9H478	68 aa		-1.45	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	NCBP2-AS2	Q69YL0	99 aa		-1.46	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	MT1L	Q93083	61 aa		-1.46	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	LRRIQ1	Q96JM4	1722 aa		-1.46	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	LOC400499	M0QZD8	3231 aa		-1.47	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	SFTA3	P0C7M3	94 aa		-1.47	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	HMGA1	P17096	107 aa	Known RBP	-1.47	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	BVES-AS1	Q5T3Y7	98 aa		-1.47	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	MT1M	Q8N339	61 aa		-1.47	□□□□□ -2.64
ATP6V0A1-210	ENST00000586315	RALGAPB	Q86X10	1494 aa		-1.48	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	KDM5D	Q9BY66	1539 aa		-1.48	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	FCER1G	P30273	86 aa		-1.48	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	TTC37	Q6PGP7	1564 aa		-1.48	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	EP400	Q96L91	3159 aa		-1.48	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	INO80	Q9ULG1	1556 aa	Predicted RBP	-1.49	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	MT2A	P02795	61 aa		-1.49	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	MT1G	P13640	62 aa		-1.49	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	NOP10	Q9NPE3	64 aa	Known RBP	-1.49	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	MAST1	Q9Y2H9	1570 aa		-1.5	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	DCHS1	Q96JQ0	3298 aa		-1.5	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315		H3BUA1	57 aa		-1.5	□□□□□ -2.65
ATP6V0A1-210	ENST00000586315	DEFB121	Q5J5C9	76 aa		-1.5	□□□□□ -2.65

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms