RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 H3BPC8 53 aa7.28□□□□□ -1.24
SMARCA4-208ENST00000585799 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
SMARCA4-208ENST00000585799 FAM229BQ4G0N7 80 aa7.27□□□□□ -1.25
SMARCA4-208ENST00000585799 C8orf87E5RJ46 101 aa7.27□□□□□ -1.25
SMARCA4-208ENST00000585799 SPINK1P00995 79 aa7.26□□□□□ -1.25
SMARCA4-208ENST00000585799 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
SMARCA4-208ENST00000585799 PRR15LQ9BU68 103 aa7.26□□□□□ -1.25
SMARCA4-208ENST00000585799 CD164Q04900 197 aa7.25□□□□□ -1.25
SMARCA4-208ENST00000585799 LYSTQ99698 3801 aa7.25□□□□□ -1.25
SMARCA4-208ENST00000585799 SEC61GP60059 68 aa7.24□□□□□ -1.25
SMARCA4-208ENST00000585799 SPAG11AQ6PDA7 123 aa7.24□□□□□ -1.25
SMARCA4-208ENST00000585799 DNAH3Q8TD57 4116 aa7.23□□□□□ -1.25
SMARCA4-208ENST00000585799 STARD9Q9P2P6 4700 aa7.22□□□□□ -1.25
SMARCA4-208ENST00000585799 COA5Q86WW8 74 aa7.22□□□□□ -1.25
SMARCA4-208ENST00000585799 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.25
SMARCA4-208ENST00000585799 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.25
SMARCA4-208ENST00000585799 Q6ZSA8 131 aa7.2□□□□□ -1.26
SMARCA4-208ENST00000585799 FP248Q71RG6 208 aaPredicted RBP7.19□□□□□ -1.26
SMARCA4-208ENST00000585799 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
SMARCA4-208ENST00000585799 A8MUN3 132 aa7.19□□□□□ -1.26
SMARCA4-208ENST00000585799 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
SMARCA4-208ENST00000585799 A6NED7 52 aa7.18□□□□□ -1.26
SMARCA4-208ENST00000585799 Q5W150 140 aa7.18□□□□□ -1.26
SMARCA4-208ENST00000585799 DNAH1Q9P2D7 4330 aa7.17□□□□□ -1.26
SMARCA4-208ENST00000585799 Q5XG85 94 aa7.17□□□□□ -1.26
SMARCA4-208ENST00000585799 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
SMARCA4-208ENST00000585799 V9GYY9 64 aa7.16□□□□□ -1.26
SMARCA4-208ENST00000585799 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
SMARCA4-208ENST00000585799 ACYP2P14621 99 aa7.12□□□□□ -1.27
SMARCA4-208ENST00000585799 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
SMARCA4-208ENST00000585799 Q8N1X5 172 aa7.11□□□□□ -1.27
SMARCA4-208ENST00000585799 CYP4F30PQ9H0H9 118 aa7.11□□□□□ -1.27
SMARCA4-208ENST00000585799 HRES1P13985 223 aa7.1□□□□□ -1.27
SMARCA4-208ENST00000585799 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
SMARCA4-208ENST00000585799 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
SMARCA4-208ENST00000585799 VPS13DQ5THJ4 4388 aa7.09□□□□□ -1.27
SMARCA4-208ENST00000585799 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
SMARCA4-208ENST00000585799 Q5VSD8 79 aa7.08□□□□□ -1.28
SMARCA4-208ENST00000585799 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
SMARCA4-208ENST00000585799 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
SMARCA4-208ENST00000585799 PRO0628Q9UI54 55 aa7□□□□□ -1.29
SMARCA4-208ENST00000585799 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
SMARCA4-208ENST00000585799 A0A1B0GU69 56 aa6.98□□□□□ -1.29
SMARCA4-208ENST00000585799 Q1T7F1 81 aa6.96□□□□□ -1.3
SMARCA4-208ENST00000585799 PMAIP1Q13794 54 aa6.95□□□□□ -1.3
SMARCA4-208ENST00000585799 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
SMARCA4-208ENST00000585799 A0A1B0GVY2 172 aa6.94□□□□□ -1.3
SMARCA4-208ENST00000585799 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
SMARCA4-208ENST00000585799 DNAH2Q9P225 4427 aa6.91□□□□□ -1.3
SMARCA4-208ENST00000585799 SPINK7P58062 85 aa6.9□□□□□ -1.3
SMARCA4-208ENST00000585799 Q5VV11 94 aa6.89□□□□□ -1.31
SMARCA4-208ENST00000585799 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
SMARCA4-208ENST00000585799 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
SMARCA4-208ENST00000585799 J3QL48 77 aa6.87□□□□□ -1.31
SMARCA4-208ENST00000585799 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
SMARCA4-208ENST00000585799 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
SMARCA4-208ENST00000585799 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
SMARCA4-208ENST00000585799 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
SMARCA4-208ENST00000585799 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
SMARCA4-208ENST00000585799 FAT1Q14517 4588 aa6.84□□□□□ -1.31
SMARCA4-208ENST00000585799 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
SMARCA4-208ENST00000585799 A8MU10 97 aa6.82□□□□□ -1.32
SMARCA4-208ENST00000585799 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
SMARCA4-208ENST00000585799 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
SMARCA4-208ENST00000585799 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
SMARCA4-208ENST00000585799 FRAS1Q86XX4 4008 aa6.8□□□□□ -1.32
SMARCA4-208ENST00000585799 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
SMARCA4-208ENST00000585799 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
SMARCA4-208ENST00000585799 Q75L30 129 aa6.76□□□□□ -1.33
SMARCA4-208ENST00000585799 DYNC1H1Q14204 4646 aaKnown RBP6.76□□□□□ -1.33
SMARCA4-208ENST00000585799 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
SMARCA4-208ENST00000585799 UQCR11O14957 56 aa6.74□□□□□ -1.33
SMARCA4-208ENST00000585799 RYR3Q15413 4870 aa6.73□□□□□ -1.33
SMARCA4-208ENST00000585799 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
SMARCA4-208ENST00000585799 A8MUU9 505 aa6.72□□□□□ -1.33
SMARCA4-208ENST00000585799 RYR2Q92736 4967 aa6.71□□□□□ -1.34
SMARCA4-208ENST00000585799 H3BS24 57 aa6.71□□□□□ -1.34
SMARCA4-208ENST00000585799 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
SMARCA4-208ENST00000585799 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
SMARCA4-208ENST00000585799 LCA10Q71F78 164 aa6.69□□□□□ -1.34
SMARCA4-208ENST00000585799 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
SMARCA4-208ENST00000585799 VPS13BQ7Z7G8 4022 aa6.66□□□□□ -1.34
SMARCA4-208ENST00000585799 KRTAP10-8P60410 259 aa6.65□□□□□ -1.34
SMARCA4-208ENST00000585799 PKHD1P08F94 4074 aa6.65□□□□□ -1.34
SMARCA4-208ENST00000585799 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.35
SMARCA4-208ENST00000585799 K7ERS5 55 aa6.63□□□□□ -1.35
SMARCA4-208ENST00000585799 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
SMARCA4-208ENST00000585799 A0A0D9SG42 100 aa6.62□□□□□ -1.35
SMARCA4-208ENST00000585799 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
SMARCA4-208ENST00000585799 XP32Q5T750 250 aa6.61□□□□□ -1.35
SMARCA4-208ENST00000585799 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
SMARCA4-208ENST00000585799 A0A1B0GU33 70 aa6.59□□□□□ -1.35
SMARCA4-208ENST00000585799 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
SMARCA4-208ENST00000585799 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
SMARCA4-208ENST00000585799 S4R3F8 94 aa6.56□□□□□ -1.36
SMARCA4-208ENST00000585799 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
SMARCA4-208ENST00000585799 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
SMARCA4-208ENST00000585799 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
SMARCA4-208ENST00000585799 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
SMARCA4-208ENST00000585799 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms