RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
CSNK1D-213ENST00000580446 A0A1B0GV72 72 aa5.82□□□□□ -1.48
CSNK1D-213ENST00000580446 H3BMG7 143 aa5.82□□□□□ -1.48
CSNK1D-213ENST00000580446 IFITM1P13164 125 aa5.81□□□□□ -1.48
CSNK1D-213ENST00000580446 MT4P47944 62 aa5.81□□□□□ -1.48
CSNK1D-213ENST00000580446 IGKV3D-7A0A0C4DH55 119 aa5.8□□□□□ -1.48
CSNK1D-213ENST00000580446 KRTAP5-7Q6L8G8 165 aa5.78□□□□□ -1.48
CSNK1D-213ENST00000580446 COPS9Q8WXC6 57 aa5.78□□□□□ -1.48
CSNK1D-213ENST00000580446 RAB37Q96AX2 223 aa5.78□□□□□ -1.48
CSNK1D-213ENST00000580446 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
CSNK1D-213ENST00000580446 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
CSNK1D-213ENST00000580446 RBM3P98179 157 aaKnown RBP5.77□□□□□ -1.49
CSNK1D-213ENST00000580446 LCA10Q71F78 164 aa5.77□□□□□ -1.49
CSNK1D-213ENST00000580446 S100A6P06703 90 aa5.76□□□□□ -1.49
CSNK1D-213ENST00000580446 C12orf57Q99622 126 aa5.76□□□□□ -1.49
CSNK1D-213ENST00000580446 TRGC2P03986 189 aa5.74□□□□□ -1.49
CSNK1D-213ENST00000580446 DSCR8Q96T75 97 aa5.74□□□□□ -1.49
CSNK1D-213ENST00000580446 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
CSNK1D-213ENST00000580446 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
CSNK1D-213ENST00000580446 FABP2P12104 132 aa5.72□□□□□ -1.49
CSNK1D-213ENST00000580446 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
CSNK1D-213ENST00000580446 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
CSNK1D-213ENST00000580446 SYS1-DBNDD2H3BUS1 97 aa5.69□□□□□ -1.5
CSNK1D-213ENST00000580446 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
CSNK1D-213ENST00000580446 SMIM6P0DI80 62 aa5.68□□□□□ -1.5
CSNK1D-213ENST00000580446 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
CSNK1D-213ENST00000580446 S4R3F8 94 aa5.68□□□□□ -1.5
CSNK1D-213ENST00000580446 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
CSNK1D-213ENST00000580446 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
CSNK1D-213ENST00000580446 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
CSNK1D-213ENST00000580446 S100A2P29034 98 aa5.66□□□□□ -1.5
CSNK1D-213ENST00000580446 LINC01545Q5VT33 79 aa5.65□□□□□ -1.5
CSNK1D-213ENST00000580446 TRACP01848 142 aa5.64□□□□□ -1.51
CSNK1D-213ENST00000580446 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
CSNK1D-213ENST00000580446 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
CSNK1D-213ENST00000580446 CCKP06307 115 aa5.63□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BKO60814 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BJP06899 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BOP23527 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BBP33778 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BDP58876 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BCP62807 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST2H2BEQ16778 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BHQ93079 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BNQ99877 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 HIST1H2BMQ99879 126 aa5.61□□□□□ -1.51
CSNK1D-213ENST00000580446 PCP4L1A6NKN8 68 aa5.6□□□□□ -1.51
CSNK1D-213ENST00000580446 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
CSNK1D-213ENST00000580446 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
CSNK1D-213ENST00000580446 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
CSNK1D-213ENST00000580446 COA6Q5JTJ3 125 aaKnown RBP5.59□□□□□ -1.51
CSNK1D-213ENST00000580446 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
CSNK1D-213ENST00000580446 Q6ZVQ6 151 aa5.58□□□□□ -1.52
CSNK1D-213ENST00000580446 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
CSNK1D-213ENST00000580446 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
CSNK1D-213ENST00000580446 ATOH7Q8N100 152 aa5.57□□□□□ -1.52
CSNK1D-213ENST00000580446 C7orf65Q6ZTY9 151 aa5.56□□□□□ -1.52
CSNK1D-213ENST00000580446 TSTD3H0UI37 97 aa5.54□□□□□ -1.52
CSNK1D-213ENST00000580446 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
CSNK1D-213ENST00000580446 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
CSNK1D-213ENST00000580446 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
CSNK1D-213ENST00000580446 NDUFB1O75438 58 aa5.53□□□□□ -1.52
CSNK1D-213ENST00000580446 PYY3Q5JQD4 70 aa5.53□□□□□ -1.52
CSNK1D-213ENST00000580446 Q5W150 140 aa5.53□□□□□ -1.52
CSNK1D-213ENST00000580446 NDUFS5O43920 106 aa5.52□□□□□ -1.53
CSNK1D-213ENST00000580446 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
CSNK1D-213ENST00000580446 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
CSNK1D-213ENST00000580446 SNCGO76070 127 aa5.51□□□□□ -1.53
CSNK1D-213ENST00000580446 J3KT08 172 aa5.5□□□□□ -1.53
CSNK1D-213ENST00000580446 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
CSNK1D-213ENST00000580446 KRTDAPP60985 99 aa5.5□□□□□ -1.53
CSNK1D-213ENST00000580446 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
CSNK1D-213ENST00000580446 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
CSNK1D-213ENST00000580446 A8MUN3 132 aa5.45□□□□□ -1.54
CSNK1D-213ENST00000580446 H0YGX0 51 aa5.45□□□□□ -1.54
CSNK1D-213ENST00000580446 K7EQZ3 153 aa5.45□□□□□ -1.54
CSNK1D-213ENST00000580446 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
CSNK1D-213ENST00000580446 VAMP8Q9BV40 100 aa5.43□□□□□ -1.54
CSNK1D-213ENST00000580446 C1orf64Q8NEQ6 169 aa5.42□□□□□ -1.54
CSNK1D-213ENST00000580446 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
CSNK1D-213ENST00000580446 C14orf144Q96I85 54 aa5.41□□□□□ -1.54
CSNK1D-213ENST00000580446 PDE6GP18545 87 aa5.4□□□□□ -1.54
CSNK1D-213ENST00000580446 M0R143 59 aa5.39□□□□□ -1.55
CSNK1D-213ENST00000580446 H3BS24 57 aa5.38□□□□□ -1.55
CSNK1D-213ENST00000580446 A0A087WVE0 104 aa5.37□□□□□ -1.55
CSNK1D-213ENST00000580446 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
CSNK1D-213ENST00000580446 SPATA45Q537H7 98 aa5.37□□□□□ -1.55
CSNK1D-213ENST00000580446 ORMDL1Q9P0S3 153 aa5.37□□□□□ -1.55
CSNK1D-213ENST00000580446 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
CSNK1D-213ENST00000580446 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
CSNK1D-213ENST00000580446 Q6ZQT0 140 aa5.36□□□□□ -1.55
CSNK1D-213ENST00000580446 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
CSNK1D-213ENST00000580446 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
CSNK1D-213ENST00000580446 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
CSNK1D-213ENST00000580446 A0A1B0GX51 115 aa5.34□□□□□ -1.55
CSNK1D-213ENST00000580446 hDV103S1A0JD37 113 aa5.33□□□□□ -1.56
CSNK1D-213ENST00000580446 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
CSNK1D-213ENST00000580446 DNAL4O96015 105 aa5.31□□□□□ -1.56
CSNK1D-213ENST00000580446 A0A1B0GV90 55 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms