RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ZNF706Q9Y5V0 76 aaPredicted RBP8.22□□□□□ -1.09
NDEL1-204ENST00000578172 PLECQ15149 4684 aaKnown RBP8.22□□□□□ -1.09
NDEL1-204ENST00000578172 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
NDEL1-204ENST00000578172 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
NDEL1-204ENST00000578172 ZNF861PO60384 105 aa8.22□□□□□ -1.09
NDEL1-204ENST00000578172 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.09
NDEL1-204ENST00000578172 SPINK7P58062 85 aa8.21□□□□□ -1.09
NDEL1-204ENST00000578172 ACYP2P14621 99 aa8.21□□□□□ -1.1
NDEL1-204ENST00000578172 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
NDEL1-204ENST00000578172 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
NDEL1-204ENST00000578172 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
NDEL1-204ENST00000578172 Q6ZRN7 208 aaPredicted RBP8.19□□□□□ -1.1
NDEL1-204ENST00000578172 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
NDEL1-204ENST00000578172 LCA10Q71F78 164 aa8.18□□□□□ -1.1
NDEL1-204ENST00000578172 WWC2-AS2Q96NR7 200 aa8.17□□□□□ -1.1
NDEL1-204ENST00000578172 DNAH7Q8WXX0 4024 aa8.16□□□□□ -1.1
NDEL1-204ENST00000578172 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
NDEL1-204ENST00000578172 SPRR1BP22528 89 aa8.15□□□□□ -1.1
NDEL1-204ENST00000578172 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
NDEL1-204ENST00000578172 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
NDEL1-204ENST00000578172 Q75L30 129 aa8.13□□□□□ -1.11
NDEL1-204ENST00000578172 IGLV7-43P04211 117 aa8.13□□□□□ -1.11
NDEL1-204ENST00000578172 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
NDEL1-204ENST00000578172 LCE6AA0A183 80 aa8.1□□□□□ -1.11
NDEL1-204ENST00000578172 HRES1P13985 223 aa8.1□□□□□ -1.11
NDEL1-204ENST00000578172 Q96NJ1 140 aa8.09□□□□□ -1.11
NDEL1-204ENST00000578172 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
NDEL1-204ENST00000578172 Q5W150 140 aa8.09□□□□□ -1.12
NDEL1-204ENST00000578172 LINC00313P59037 77 aa8.08□□□□□ -1.12
NDEL1-204ENST00000578172 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
NDEL1-204ENST00000578172 DNAH3Q8TD57 4116 aa8.07□□□□□ -1.12
NDEL1-204ENST00000578172 UQCR11O14957 56 aa8.06□□□□□ -1.12
NDEL1-204ENST00000578172 STARD9Q9P2P6 4700 aa8.04□□□□□ -1.12
NDEL1-204ENST00000578172 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
NDEL1-204ENST00000578172 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
NDEL1-204ENST00000578172 PRKDCP78527 4128 aaKnown RBP8.04□□□□□ -1.12
NDEL1-204ENST00000578172 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
NDEL1-204ENST00000578172 LINC01558Q9Y6Z2 57 aa8.03□□□□□ -1.12
NDEL1-204ENST00000578172 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
NDEL1-204ENST00000578172 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
NDEL1-204ENST00000578172 DNAH1Q9P2D7 4330 aa8.02□□□□□ -1.13
NDEL1-204ENST00000578172 K7ERS5 55 aa8.01□□□□□ -1.13
NDEL1-204ENST00000578172 KRTAP10-1P60331 282 aa8□□□□□ -1.13
NDEL1-204ENST00000578172 H3BS24 57 aa7.98□□□□□ -1.13
NDEL1-204ENST00000578172 Q6ZR54 194 aa7.98□□□□□ -1.13
NDEL1-204ENST00000578172 Q8N1X5 172 aa7.98□□□□□ -1.13
NDEL1-204ENST00000578172 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
NDEL1-204ENST00000578172 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
NDEL1-204ENST00000578172 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
NDEL1-204ENST00000578172 LINC00483Q53H64 154 aa7.96□□□□□ -1.14
NDEL1-204ENST00000578172 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
NDEL1-204ENST00000578172 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
NDEL1-204ENST00000578172 DNAH11Q96DT5 4516 aa7.94□□□□□ -1.14
NDEL1-204ENST00000578172 CSAG1Q6PB30 78 aa7.93□□□□□ -1.14
NDEL1-204ENST00000578172 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
NDEL1-204ENST00000578172 A6NN06 94 aa7.93□□□□□ -1.14
NDEL1-204ENST00000578172 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
NDEL1-204ENST00000578172 DNAH8Q96JB1 4490 aa7.9□□□□□ -1.14
NDEL1-204ENST00000578172 KRTAP13-2Q52LG2 175 aa7.89□□□□□ -1.15
NDEL1-204ENST00000578172 DNAH17Q9UFH2 4485 aa7.86□□□□□ -1.15
NDEL1-204ENST00000578172 VPS13DQ5THJ4 4388 aa7.86□□□□□ -1.15
NDEL1-204ENST00000578172 DNAH6Q9C0G6 4158 aa7.83□□□□□ -1.16
NDEL1-204ENST00000578172 DNAH2Q9P225 4427 aa7.82□□□□□ -1.16
NDEL1-204ENST00000578172 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
NDEL1-204ENST00000578172 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
NDEL1-204ENST00000578172 LINC00304Q8N9R0 145 aa7.76□□□□□ -1.17
NDEL1-204ENST00000578172 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
NDEL1-204ENST00000578172 A0A0D9SG42 100 aa7.74□□□□□ -1.17
NDEL1-204ENST00000578172 HECTD4Q9Y4D8 3996 aa7.68□□□□□ -1.18
NDEL1-204ENST00000578172 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
NDEL1-204ENST00000578172 FAT1Q14517 4588 aa7.67□□□□□ -1.18
NDEL1-204ENST00000578172 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
NDEL1-204ENST00000578172 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.19
NDEL1-204ENST00000578172 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
NDEL1-204ENST00000578172 A0A1B0GU33 70 aa7.64□□□□□ -1.19
NDEL1-204ENST00000578172 KRTAP13-3Q3SY46 172 aa7.6□□□□□ -1.19
NDEL1-204ENST00000578172 SPATA8Q6RVD6 105 aa7.6□□□□□ -1.19
NDEL1-204ENST00000578172 DNAH5Q8TE73 4624 aa7.6□□□□□ -1.19
NDEL1-204ENST00000578172 Q6ZSA8 131 aa7.56□□□□□ -1.2
NDEL1-204ENST00000578172 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
NDEL1-204ENST00000578172 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
NDEL1-204ENST00000578172 PKHD1P08F94 4074 aa7.52□□□□□ -1.21
NDEL1-204ENST00000578172 ALMS1Q8TCU4 4167 aa7.49□□□□□ -1.21
NDEL1-204ENST00000578172 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
NDEL1-204ENST00000578172 FAT2Q9NYQ8 4349 aa7.45□□□□□ -1.22
NDEL1-204ENST00000578172 DYNC1H1Q14204 4646 aaKnown RBP7.39□□□□□ -1.23
NDEL1-204ENST00000578172 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
NDEL1-204ENST00000578172 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
NDEL1-204ENST00000578172 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
NDEL1-204ENST00000578172 ROMO1P60602 79 aa7.33□□□□□ -1.24
NDEL1-204ENST00000578172 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
NDEL1-204ENST00000578172 Q5VSD8 79 aa7.3□□□□□ -1.24
NDEL1-204ENST00000578172 A8MUU9 505 aa7.3□□□□□ -1.24
NDEL1-204ENST00000578172 SACSQ9NZJ4 4579 aa7.27□□□□□ -1.24
NDEL1-204ENST00000578172 H0YAA0 97 aa7.27□□□□□ -1.25
NDEL1-204ENST00000578172 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
NDEL1-204ENST00000578172 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
NDEL1-204ENST00000578172 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
NDEL1-204ENST00000578172 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
NDEL1-204ENST00000578172 PKD1P98161 4303 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms