RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 XP32Q5T750 250 aa5.65□□□□□ -1.51
SEC22B-201ENST00000578049 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
SEC22B-201ENST00000578049 PRUNE2Q8WUY3 3088 aa5.64□□□□□ -1.51
SEC22B-201ENST00000578049 CELSR2Q9HCU4 2923 aa5.63□□□□□ -1.51
SEC22B-201ENST00000578049 ATMQ13315 3056 aa5.62□□□□□ -1.51
SEC22B-201ENST00000578049 LRBAP50851 2863 aa5.61□□□□□ -1.51
SEC22B-201ENST00000578049 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
SEC22B-201ENST00000578049 DMXL2Q8TDJ6 3036 aa5.6□□□□□ -1.51
SEC22B-201ENST00000578049 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
SEC22B-201ENST00000578049 LAMA3Q16787 3333 aa5.58□□□□□ -1.52
SEC22B-201ENST00000578049 COL12A1Q99715 3063 aa5.57□□□□□ -1.52
SEC22B-201ENST00000578049 ADGRG4Q8IZF6 3080 aa5.56□□□□□ -1.52
SEC22B-201ENST00000578049 DCHS2Q6V1P9 2916 aa5.56□□□□□ -1.52
SEC22B-201ENST00000578049 FRYLO94915 3013 aa5.55□□□□□ -1.52
SEC22B-201ENST00000578049 ZANQ9Y493 2812 aa5.55□□□□□ -1.52
SEC22B-201ENST00000578049 MKI67P46013 3256 aaKnown RBP5.54□□□□□ -1.52
SEC22B-201ENST00000578049 ZZEF1O43149 2961 aa5.54□□□□□ -1.52
SEC22B-201ENST00000578049 FREM2Q5SZK8 3169 aa5.49□□□□□ -1.53
SEC22B-201ENST00000578049 TGP01266 2768 aa5.49□□□□□ -1.53
SEC22B-201ENST00000578049 KRTAP10-8P60410 259 aa5.46□□□□□ -1.54
SEC22B-201ENST00000578049 LAMA1P25391 3075 aa5.44□□□□□ -1.54
SEC22B-201ENST00000578049 TENM1Q9UKZ4 2725 aa5.43□□□□□ -1.54
SEC22B-201ENST00000578049 NF1P21359 2839 aa5.42□□□□□ -1.54
SEC22B-201ENST00000578049 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
SEC22B-201ENST00000578049 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
SEC22B-201ENST00000578049 REV3LO60673 3130 aa5.37□□□□□ -1.55
SEC22B-201ENST00000578049 XIRP2A4UGR9 3374 aa5.37□□□□□ -1.55
SEC22B-201ENST00000578049 UNC80Q8N2C7 3258 aa5.36□□□□□ -1.55
SEC22B-201ENST00000578049 BOD1L1Q8NFC6 3051 aa5.36□□□□□ -1.55
SEC22B-201ENST00000578049 FBN2P35556 2912 aa5.34□□□□□ -1.55
SEC22B-201ENST00000578049 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
SEC22B-201ENST00000578049 BRCA2P51587 3418 aa5.34□□□□□ -1.55
SEC22B-201ENST00000578049 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
SEC22B-201ENST00000578049 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
SEC22B-201ENST00000578049 TNRC18O15417 2968 aaPredicted RBP5.3□□□□□ -1.56
SEC22B-201ENST00000578049 EYSQ5T1H1 3165 aa5.27□□□□□ -1.57
SEC22B-201ENST00000578049 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
SEC22B-201ENST00000578049 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
SEC22B-201ENST00000578049 A0A1B0GVY2 172 aa5.25□□□□□ -1.57
SEC22B-201ENST00000578049 CELSR3Q9NYQ7 3312 aa5.25□□□□□ -1.57
SEC22B-201ENST00000578049 TENM2Q9NT68 2774 aa5.25□□□□□ -1.57
SEC22B-201ENST00000578049 CRYBG3Q68DQ2 2970 aa5.25□□□□□ -1.57
SEC22B-201ENST00000578049 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
SEC22B-201ENST00000578049 PDZD2O15018 2839 aa5.23□□□□□ -1.57
SEC22B-201ENST00000578049 CELSR1Q9NYQ6 3014 aa5.18□□□□□ -1.58
SEC22B-201ENST00000578049 VCANP13611 3396 aa5.18□□□□□ -1.58
SEC22B-201ENST00000578049 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
SEC22B-201ENST00000578049 COL6A3P12111 3177 aa5.15□□□□□ -1.58
SEC22B-201ENST00000578049 CFAP47Q6ZTR5 3102 aa5.14□□□□□ -1.59
SEC22B-201ENST00000578049 CDH23Q9H251 3354 aa5.13□□□□□ -1.59
SEC22B-201ENST00000578049 PKD1L1Q8TDX9 2849 aa5.08□□□□□ -1.6
SEC22B-201ENST00000578049 DMXL1Q9Y485 3027 aa5.06□□□□□ -1.6
SEC22B-201ENST00000578049 INE1O15225 51 aa5.05□□□□□ -1.6
SEC22B-201ENST00000578049 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
SEC22B-201ENST00000578049 SZT2Q5T011 3432 aa5.04□□□□□ -1.6
SEC22B-201ENST00000578049 VWFP04275 2813 aa5□□□□□ -1.61
SEC22B-201ENST00000578049 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
SEC22B-201ENST00000578049 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
SEC22B-201ENST00000578049 DNAH14Q0VDD8 3507 aa4.94□□□□□ -1.62
SEC22B-201ENST00000578049 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
SEC22B-201ENST00000578049 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
SEC22B-201ENST00000578049 USP34Q70CQ2 3546 aa4.91□□□□□ -1.62
SEC22B-201ENST00000578049 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
SEC22B-201ENST00000578049 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
SEC22B-201ENST00000578049 LOC400499M0QZD8 3231 aa4.87□□□□□ -1.63
SEC22B-201ENST00000578049 FBN1P35555 2871 aaKnown RBP4.84□□□□□ -1.63
SEC22B-201ENST00000578049 SPEGQ15772 3267 aa4.81□□□□□ -1.64
SEC22B-201ENST00000578049 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
SEC22B-201ENST00000578049 OTOGQ6ZRI0 2925 aa4.77□□□□□ -1.65
SEC22B-201ENST00000578049 COL7A1Q02388 2944 aa4.75□□□□□ -1.65
SEC22B-201ENST00000578049 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
SEC22B-201ENST00000578049 MYO15AQ9UKN7 3530 aa4.74□□□□□ -1.65
SEC22B-201ENST00000578049 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-201ENST00000578049 DCHS1Q96JQ0 3298 aa4.71□□□□□ -1.66
SEC22B-201ENST00000578049 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
SEC22B-201ENST00000578049 SPTBN5Q9NRC6 3674 aaKnown RBP4.67□□□□□ -1.66
SEC22B-201ENST00000578049 WDFY3Q8IZQ1 3526 aa4.59□□□□□ -1.67
SEC22B-201ENST00000578049 RELNP78509 3460 aa4.55□□□□□ -1.68
SEC22B-201ENST00000578049 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
SEC22B-201ENST00000578049 ANK3Q12955 4377 aaKnown RBP4.5□□□□□ -1.69
SEC22B-201ENST00000578049 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
SEC22B-201ENST00000578049 ZFHX4Q86UP3 3567 aa4.45□□□□□ -1.7
SEC22B-201ENST00000578049 MUC3AQ02505 3323 aa4.39□□□□□ -1.71
SEC22B-201ENST00000578049 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
SEC22B-201ENST00000578049 HUWE1Q7Z6Z7 4374 aaKnown RBP4.34□□□□□ -1.71
SEC22B-201ENST00000578049 ZFHX3Q15911 3703 aa4.32□□□□□ -1.72
SEC22B-201ENST00000578049 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
SEC22B-201ENST00000578049 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
SEC22B-201ENST00000578049 TRRAPQ9Y4A5 3859 aa4.31□□□□□ -1.72
SEC22B-201ENST00000578049 NBPF19A0A087WUL8 3843 aa4.31□□□□□ -1.72
SEC22B-201ENST00000578049 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
SEC22B-201ENST00000578049 CSMD1Q96PZ7 3565 aa4.28□□□□□ -1.72
SEC22B-201ENST00000578049 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
SEC22B-201ENST00000578049 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
SEC22B-201ENST00000578049 CUBNO60494 3623 aa4.25□□□□□ -1.73
SEC22B-201ENST00000578049 DNAH2Q9P225 4427 aa4.25□□□□□ -1.73
SEC22B-201ENST00000578049 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
SEC22B-201ENST00000578049 DNAH10Q8IVF4 4471 aa4.24□□□□□ -1.73
SEC22B-201ENST00000578049 DNAH5Q8TE73 4624 aa4.23□□□□□ -1.73
SEC22B-201ENST00000578049 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms