RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CD164Q04900 197 aa8.28□□□□□ -1.08
SREBF1-217ENST00000577897 PRR4Q16378 134 aa8.27□□□□□ -1.09
SREBF1-217ENST00000577897 UQCRQO14949 82 aa8.26□□□□□ -1.09
SREBF1-217ENST00000577897 NDUFB1O75438 58 aa8.26□□□□□ -1.09
SREBF1-217ENST00000577897 SERP2Q8N6R1 65 aa8.26□□□□□ -1.09
SREBF1-217ENST00000577897 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
SREBF1-217ENST00000577897 IGKV4-1P06312 121 aa8.24□□□□□ -1.09
SREBF1-217ENST00000577897 COX7CP15954 63 aa8.24□□□□□ -1.09
SREBF1-217ENST00000577897 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
SREBF1-217ENST00000577897 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
SREBF1-217ENST00000577897 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
SREBF1-217ENST00000577897 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
SREBF1-217ENST00000577897 A8MWP4 228 aa8.19□□□□□ -1.1
SREBF1-217ENST00000577897 DSCR10P59022 87 aa8.19□□□□□ -1.1
SREBF1-217ENST00000577897 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
SREBF1-217ENST00000577897 HRCT1Q6UXD1 115 aa8.19□□□□□ -1.1
SREBF1-217ENST00000577897 Q8N9L7 120 aa8.18□□□□□ -1.1
SREBF1-217ENST00000577897 HCG22E2RYF7 251 aa8.17□□□□□ -1.1
SREBF1-217ENST00000577897 K7EQZ3 153 aa8.16□□□□□ -1.1
SREBF1-217ENST00000577897 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
SREBF1-217ENST00000577897 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
SREBF1-217ENST00000577897 CCDC179H3BU77 68 aa8.14□□□□□ -1.11
SREBF1-217ENST00000577897 DEFB116Q30KQ4 102 aa8.14□□□□□ -1.11
SREBF1-217ENST00000577897 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
SREBF1-217ENST00000577897 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
SREBF1-217ENST00000577897 Q5XG85 94 aa8.11□□□□□ -1.11
SREBF1-217ENST00000577897 SPAG11AQ6PDA7 123 aa8.11□□□□□ -1.11
SREBF1-217ENST00000577897 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
SREBF1-217ENST00000577897 A0A087X002 238 aa8.09□□□□□ -1.11
SREBF1-217ENST00000577897 KRTAP1-4P0C5Y4 121 aa8.09□□□□□ -1.11
SREBF1-217ENST00000577897 SPINK1P00995 79 aa8.08□□□□□ -1.12
SREBF1-217ENST00000577897 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
SREBF1-217ENST00000577897 Q96NJ1 140 aa8.07□□□□□ -1.12
SREBF1-217ENST00000577897 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
SREBF1-217ENST00000577897 WFDC13Q8IUB5 93 aa8.06□□□□□ -1.12
SREBF1-217ENST00000577897 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
SREBF1-217ENST00000577897 NDUFC1O43677 76 aa8.05□□□□□ -1.12
SREBF1-217ENST00000577897 RPS29P62273 56 aaKnown RBP8.05□□□□□ -1.12
SREBF1-217ENST00000577897 C5orf47Q569G3 176 aa8.05□□□□□ -1.12
SREBF1-217ENST00000577897 hDV103S1A0JD37 113 aa8.04□□□□□ -1.12
SREBF1-217ENST00000577897 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
SREBF1-217ENST00000577897 C20orf197Q8N268 126 aa8.04□□□□□ -1.12
SREBF1-217ENST00000577897 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
SREBF1-217ENST00000577897 MP68P56378 58 aa8.02□□□□□ -1.13
SREBF1-217ENST00000577897 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
SREBF1-217ENST00000577897 TP53AIP1Q9HCN2 124 aa8.02□□□□□ -1.13
SREBF1-217ENST00000577897 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
SREBF1-217ENST00000577897 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
SREBF1-217ENST00000577897 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
SREBF1-217ENST00000577897 TMEM254Q8TBM7 123 aa8□□□□□ -1.13
SREBF1-217ENST00000577897 TMEM258P61165 79 aa7.99□□□□□ -1.13
SREBF1-217ENST00000577897 H3BPC8 53 aa7.98□□□□□ -1.13
SREBF1-217ENST00000577897 MUC17Q685J3 4493 aa7.96□□□□□ -1.14
SREBF1-217ENST00000577897 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.14
SREBF1-217ENST00000577897 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
SREBF1-217ENST00000577897 LINC00313P59037 77 aa7.94□□□□□ -1.14
SREBF1-217ENST00000577897 KRTAP9-7A8MTY7 169 aa7.93□□□□□ -1.14
SREBF1-217ENST00000577897 NDUFS5O43920 106 aa7.93□□□□□ -1.14
SREBF1-217ENST00000577897 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
SREBF1-217ENST00000577897 RETNLBQ9BQ08 111 aa7.92□□□□□ -1.14
SREBF1-217ENST00000577897 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
SREBF1-217ENST00000577897 TRAV22A0A0B4J277 110 aa7.9□□□□□ -1.14
SREBF1-217ENST00000577897 H0Y9P7 68 aa7.89□□□□□ -1.15
SREBF1-217ENST00000577897 H7BZZ5 65 aa7.86□□□□□ -1.15
SREBF1-217ENST00000577897 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
SREBF1-217ENST00000577897 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
SREBF1-217ENST00000577897 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
SREBF1-217ENST00000577897 LINC00208Q96KT6 92 aa7.84□□□□□ -1.15
SREBF1-217ENST00000577897 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
SREBF1-217ENST00000577897 C1orf64Q8NEQ6 169 aa7.82□□□□□ -1.16
SREBF1-217ENST00000577897 ZCCHC13Q8WW36 166 aaKnown RBP7.81□□□□□ -1.16
SREBF1-217ENST00000577897 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
SREBF1-217ENST00000577897 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
SREBF1-217ENST00000577897 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
SREBF1-217ENST00000577897 NOTCH2NLQ7Z3S9 236 aa7.79□□□□□ -1.16
SREBF1-217ENST00000577897 Q8N9P0 234 aaPredicted RBP7.78□□□□□ -1.16
SREBF1-217ENST00000577897 LOC101927531A0A1B0GV80 90 aa7.77□□□□□ -1.17
SREBF1-217ENST00000577897 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
SREBF1-217ENST00000577897 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
SREBF1-217ENST00000577897 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
SREBF1-217ENST00000577897 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
SREBF1-217ENST00000577897 KRTAP16-1A8MUX0 517 aa7.7□□□□□ -1.18
SREBF1-217ENST00000577897 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
SREBF1-217ENST00000577897 SEC61BP60468 96 aaKnown RBP7.63□□□□□ -1.19
SREBF1-217ENST00000577897 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
SREBF1-217ENST00000577897 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
SREBF1-217ENST00000577897 Q5W150 140 aa7.62□□□□□ -1.19
SREBF1-217ENST00000577897 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
SREBF1-217ENST00000577897 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
SREBF1-217ENST00000577897 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
SREBF1-217ENST00000577897 A8MUU9 505 aa7.6□□□□□ -1.19
SREBF1-217ENST00000577897 MT1HP80294 61 aa7.6□□□□□ -1.19
SREBF1-217ENST00000577897 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
SREBF1-217ENST00000577897 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
SREBF1-217ENST00000577897 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
SREBF1-217ENST00000577897 Q75L30 129 aa7.56□□□□□ -1.2
SREBF1-217ENST00000577897 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
SREBF1-217ENST00000577897 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
SREBF1-217ENST00000577897 LCE2BO14633 110 aa7.54□□□□□ -1.2
SREBF1-217ENST00000577897 KRTAP10-6P60371 365 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms