RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
CDH8-203ENST00000577390 SPEGQ15772 3267 aa5.37□□□□□ -1.55
CDH8-203ENST00000577390 KRTAP29-1A8MX34 341 aaPredicted RBP5.36□□□□□ -1.55
CDH8-203ENST00000577390 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
CDH8-203ENST00000577390 SPRR1BP22528 89 aa5.34□□□□□ -1.55
CDH8-203ENST00000577390 TENM3Q9P273 2699 aa5.34□□□□□ -1.55
CDH8-203ENST00000577390 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
CDH8-203ENST00000577390 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
CDH8-203ENST00000577390 A8MUU9 505 aa5.32□□□□□ -1.56
CDH8-203ENST00000577390 DMXL2Q8TDJ6 3036 aa5.32□□□□□ -1.56
CDH8-203ENST00000577390 Q5W150 140 aa5.32□□□□□ -1.56
CDH8-203ENST00000577390 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
CDH8-203ENST00000577390 KRTAP10-3P60369 221 aa5.31□□□□□ -1.56
CDH8-203ENST00000577390 WDFY4Q6ZS81 3184 aa5.3□□□□□ -1.56
CDH8-203ENST00000577390 COL6A3P12111 3177 aa5.3□□□□□ -1.56
CDH8-203ENST00000577390 TNP1P09430 55 aa5.29□□□□□ -1.56
CDH8-203ENST00000577390 SPTBN5Q9NRC6 3674 aaKnown RBP5.29□□□□□ -1.56
CDH8-203ENST00000577390 PLAC8Q9NZF1 115 aa5.29□□□□□ -1.56
CDH8-203ENST00000577390 BOD1L1Q8NFC6 3051 aa5.29□□□□□ -1.56
CDH8-203ENST00000577390 ADGRG4Q8IZF6 3080 aa5.29□□□□□ -1.56
CDH8-203ENST00000577390 SPRR1AP35321 89 aa5.27□□□□□ -1.57
CDH8-203ENST00000577390 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
CDH8-203ENST00000577390 PANO1I0J062 215 aa5.26□□□□□ -1.57
CDH8-203ENST00000577390 USP34Q70CQ2 3546 aa5.24□□□□□ -1.57
CDH8-203ENST00000577390 PKD1L1Q8TDX9 2849 aa5.23□□□□□ -1.57
CDH8-203ENST00000577390 VWFP04275 2813 aa5.23□□□□□ -1.57
CDH8-203ENST00000577390 TENM1Q9UKZ4 2725 aa5.23□□□□□ -1.57
CDH8-203ENST00000577390 TENM2Q9NT68 2774 aa5.21□□□□□ -1.58
CDH8-203ENST00000577390 DMDP11532 3685 aa5.2□□□□□ -1.58
CDH8-203ENST00000577390 KRTAP4-16G5E9R7 235 aaPredicted RBP5.19□□□□□ -1.58
CDH8-203ENST00000577390 EYSQ5T1H1 3165 aa5.19□□□□□ -1.58
CDH8-203ENST00000577390 KRTAP26-1Q6PEX3 210 aa5.18□□□□□ -1.58
CDH8-203ENST00000577390 KRTAP10-1P60331 282 aa5.17□□□□□ -1.58
CDH8-203ENST00000577390 CFAP47Q6ZTR5 3102 aa5.17□□□□□ -1.58
CDH8-203ENST00000577390 WDFY3Q8IZQ1 3526 aa5.17□□□□□ -1.58
CDH8-203ENST00000577390 ASPMQ8IZT6 3477 aa5.17□□□□□ -1.58
CDH8-203ENST00000577390 KRTAP10-2P60368 255 aa5.15□□□□□ -1.59
CDH8-203ENST00000577390 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
CDH8-203ENST00000577390 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
CDH8-203ENST00000577390 MYO15AQ9UKN7 3530 aa5.11□□□□□ -1.59
CDH8-203ENST00000577390 NBPF19A0A087WUL8 3843 aa5.1□□□□□ -1.59
CDH8-203ENST00000577390 LAMA5O15230 3695 aa5.08□□□□□ -1.6
CDH8-203ENST00000577390 TENM4Q6N022 2769 aa5.08□□□□□ -1.6
CDH8-203ENST00000577390 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
CDH8-203ENST00000577390 CELSR1Q9NYQ6 3014 aa5.06□□□□□ -1.6
CDH8-203ENST00000577390 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
CDH8-203ENST00000577390 SMG1Q96Q15 3661 aaKnown RBP5.01□□□□□ -1.61
CDH8-203ENST00000577390 PP632Q6XCG6 107 aa5□□□□□ -1.61
CDH8-203ENST00000577390 FBN1P35555 2871 aaKnown RBP4.99□□□□□ -1.61
CDH8-203ENST00000577390 ZFHX4Q86UP3 3567 aa4.99□□□□□ -1.61
CDH8-203ENST00000577390 H0YAA0 97 aa4.96□□□□□ -1.62
CDH8-203ENST00000577390 MEGF8Q7Z7M0 2845 aa4.95□□□□□ -1.62
CDH8-203ENST00000577390 KRTAP1-5Q9BYS1 174 aa4.93□□□□□ -1.62
CDH8-203ENST00000577390 SPENQ96T58 3664 aaKnown RBP4.91□□□□□ -1.62
CDH8-203ENST00000577390 COL7A1Q02388 2944 aa4.91□□□□□ -1.62
CDH8-203ENST00000577390 KRTAP1-3Q8IUG1 177 aa4.91□□□□□ -1.62
CDH8-203ENST00000577390 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
CDH8-203ENST00000577390 LOC400499M0QZD8 3231 aa4.87□□□□□ -1.63
CDH8-203ENST00000577390 OTOGQ6ZRI0 2925 aa4.87□□□□□ -1.63
CDH8-203ENST00000577390 DCHS1Q96JQ0 3298 aa4.84□□□□□ -1.64
CDH8-203ENST00000577390 VPS13CQ709C8 3753 aa4.82□□□□□ -1.64
CDH8-203ENST00000577390 AKAP9Q99996 3911 aa4.81□□□□□ -1.64
CDH8-203ENST00000577390 CSMD1Q96PZ7 3565 aa4.81□□□□□ -1.64
CDH8-203ENST00000577390 KRTAP7-1Q8IUC3 87 aa4.81□□□□□ -1.64
CDH8-203ENST00000577390 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
CDH8-203ENST00000577390 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
CDH8-203ENST00000577390 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
CDH8-203ENST00000577390 Q6ZRN7 208 aaPredicted RBP4.74□□□□□ -1.65
CDH8-203ENST00000577390 ALMS1Q8TCU4 4167 aa4.74□□□□□ -1.65
CDH8-203ENST00000577390 RELNP78509 3460 aa4.73□□□□□ -1.65
CDH8-203ENST00000577390 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
CDH8-203ENST00000577390 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
CDH8-203ENST00000577390 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
CDH8-203ENST00000577390 SVEP1Q4LDE5 3571 aa4.66□□□□□ -1.66
CDH8-203ENST00000577390 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
CDH8-203ENST00000577390 KRTAP13-2Q52LG2 175 aa4.62□□□□□ -1.67
CDH8-203ENST00000577390 XP32Q5T750 250 aa4.62□□□□□ -1.67
CDH8-203ENST00000577390 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
CDH8-203ENST00000577390 CUBNO60494 3623 aa4.53□□□□□ -1.68
CDH8-203ENST00000577390 KRTAP21-3Q3LHN1 58 aa4.53□□□□□ -1.68
CDH8-203ENST00000577390 CSMD2Q7Z408 3487 aa4.5□□□□□ -1.69
CDH8-203ENST00000577390 MUC3AQ02505 3323 aa4.47□□□□□ -1.69
CDH8-203ENST00000577390 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
CDH8-203ENST00000577390 BSNQ9UPA5 3926 aa4.45□□□□□ -1.7
CDH8-203ENST00000577390 TRRAPQ9Y4A5 3859 aa4.44□□□□□ -1.7
CDH8-203ENST00000577390 INE1O15225 51 aa4.39□□□□□ -1.71
CDH8-203ENST00000577390 LYSTQ99698 3801 aa4.36□□□□□ -1.71
CDH8-203ENST00000577390 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
CDH8-203ENST00000577390 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
CDH8-203ENST00000577390 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
CDH8-203ENST00000577390 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
CDH8-203ENST00000577390 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
CDH8-203ENST00000577390 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
CDH8-203ENST00000577390 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
CDH8-203ENST00000577390 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
CDH8-203ENST00000577390 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
CDH8-203ENST00000577390 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
CDH8-203ENST00000577390 DNAH3Q8TD57 4116 aa4.13□□□□□ -1.75
CDH8-203ENST00000577390 KRTAP3-2Q9BYR7 98 aa4.12□□□□□ -1.75
CDH8-203ENST00000577390 ZNF469Q96JG9 3925 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms