RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 NDUFB1O75438 58 aa7.99□□□□□ -1.13
SMG6-220ENST00000576218 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
SMG6-220ENST00000576218 A0A1B0GW54 56 aa7.97□□□□□ -1.13
SMG6-220ENST00000576218 H3BT86 120 aa7.97□□□□□ -1.13
SMG6-220ENST00000576218 LCE2CQ5TA81 110 aa7.97□□□□□ -1.13
SMG6-220ENST00000576218 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
SMG6-220ENST00000576218 M0R2T5 61 aa7.96□□□□□ -1.14
SMG6-220ENST00000576218 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.14
SMG6-220ENST00000576218 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
SMG6-220ENST00000576218 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
SMG6-220ENST00000576218 KRTAP19-2Q3LHN2 52 aa7.95□□□□□ -1.14
SMG6-220ENST00000576218 SPCS1Q9Y6A9 102 aa7.94□□□□□ -1.14
SMG6-220ENST00000576218 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
SMG6-220ENST00000576218 MT1HP80294 61 aa7.93□□□□□ -1.14
SMG6-220ENST00000576218 NREPQ16612 68 aa7.93□□□□□ -1.14
SMG6-220ENST00000576218 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
SMG6-220ENST00000576218 A8MWP4 228 aa7.9□□□□□ -1.14
SMG6-220ENST00000576218 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
SMG6-220ENST00000576218 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
SMG6-220ENST00000576218 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
SMG6-220ENST00000576218 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
SMG6-220ENST00000576218 IGKV3D-7A0A0C4DH55 119 aa7.84□□□□□ -1.15
SMG6-220ENST00000576218 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
SMG6-220ENST00000576218 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
SMG6-220ENST00000576218 Q6ZVQ6 151 aa7.81□□□□□ -1.16
SMG6-220ENST00000576218 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
SMG6-220ENST00000576218 K7EP34 96 aa7.8□□□□□ -1.16
SMG6-220ENST00000576218 BPY2O14599 106 aa7.8□□□□□ -1.16
SMG6-220ENST00000576218 K7EQZ3 153 aa7.77□□□□□ -1.17
SMG6-220ENST00000576218 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
SMG6-220ENST00000576218 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
SMG6-220ENST00000576218 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
SMG6-220ENST00000576218 NDUFS5O43920 106 aa7.76□□□□□ -1.17
SMG6-220ENST00000576218 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
SMG6-220ENST00000576218 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
SMG6-220ENST00000576218 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
SMG6-220ENST00000576218 hDV103S1A0JD37 113 aa7.74□□□□□ -1.17
SMG6-220ENST00000576218 MRPL34Q9BQ48 92 aaKnown RBP7.74□□□□□ -1.17
SMG6-220ENST00000576218 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
SMG6-220ENST00000576218 HRES1P13985 223 aa7.72□□□□□ -1.17
SMG6-220ENST00000576218 SPINK7P58062 85 aa7.72□□□□□ -1.17
SMG6-220ENST00000576218 UBL5Q9BZL1 73 aa7.72□□□□□ -1.17
SMG6-220ENST00000576218 LCE2DQ5TA82 110 aaPredicted RBP7.71□□□□□ -1.18
SMG6-220ENST00000576218 PRO0461Q9UI25 63 aa7.71□□□□□ -1.18
SMG6-220ENST00000576218 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
SMG6-220ENST00000576218 Q8N9L7 120 aa7.68□□□□□ -1.18
SMG6-220ENST00000576218 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
SMG6-220ENST00000576218 F8W1H4 67 aa7.66□□□□□ -1.18
SMG6-220ENST00000576218 CASC2Q6XLA1 102 aa7.66□□□□□ -1.18
SMG6-220ENST00000576218 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.18
SMG6-220ENST00000576218 LINC00846Q9NV44 126 aa7.65□□□□□ -1.18
SMG6-220ENST00000576218 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
SMG6-220ENST00000576218 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
SMG6-220ENST00000576218 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
SMG6-220ENST00000576218 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
SMG6-220ENST00000576218 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
SMG6-220ENST00000576218 A0A1B0GV90 55 aa7.54□□□□□ -1.2
SMG6-220ENST00000576218 CXCL6P80162 114 aa7.54□□□□□ -1.2
SMG6-220ENST00000576218 Q5W150 140 aa7.51□□□□□ -1.21
SMG6-220ENST00000576218 FSIP2Q5CZC0 6907 aa7.51□□□□□ -1.21
SMG6-220ENST00000576218 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
SMG6-220ENST00000576218 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
SMG6-220ENST00000576218 ACYP1P07311 99 aa7.46□□□□□ -1.22
SMG6-220ENST00000576218 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
SMG6-220ENST00000576218 MT2AP02795 61 aa7.43□□□□□ -1.22
SMG6-220ENST00000576218 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
SMG6-220ENST00000576218 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
SMG6-220ENST00000576218 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
SMG6-220ENST00000576218 FAM240AA0A1B0GVK7 77 aa7.39□□□□□ -1.23
SMG6-220ENST00000576218 ATP5EP2Q5VTU8 51 aa7.39□□□□□ -1.23
SMG6-220ENST00000576218 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
SMG6-220ENST00000576218 MT1FP04733 61 aa7.37□□□□□ -1.23
SMG6-220ENST00000576218 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
SMG6-220ENST00000576218 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
SMG6-220ENST00000576218 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
SMG6-220ENST00000576218 S4R3F8 94 aa7.25□□□□□ -1.25
SMG6-220ENST00000576218 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
SMG6-220ENST00000576218 J3QR89 54 aa7.24□□□□□ -1.25
SMG6-220ENST00000576218 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
SMG6-220ENST00000576218 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
SMG6-220ENST00000576218 A0A087WVE0 104 aa7.22□□□□□ -1.25
SMG6-220ENST00000576218 UQCRQO14949 82 aa7.22□□□□□ -1.25
SMG6-220ENST00000576218 CYP4F30PQ9H0H9 118 aa7.21□□□□□ -1.26
SMG6-220ENST00000576218 H0Y9P7 68 aa7.2□□□□□ -1.26
SMG6-220ENST00000576218 ATOX1O00244 68 aa7.2□□□□□ -1.26
SMG6-220ENST00000576218 LCE2BO14633 110 aa7.19□□□□□ -1.26
SMG6-220ENST00000576218 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
SMG6-220ENST00000576218 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
SMG6-220ENST00000576218 CSAG1Q6PB30 78 aa7.17□□□□□ -1.26
SMG6-220ENST00000576218 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
SMG6-220ENST00000576218 LCA10Q71F78 164 aa7.15□□□□□ -1.26
SMG6-220ENST00000576218 K7ERU9 68 aa7.14□□□□□ -1.27
SMG6-220ENST00000576218 MP68P56378 58 aa7.11□□□□□ -1.27
SMG6-220ENST00000576218 USH2AO75445 5202 aa7.11□□□□□ -1.27
SMG6-220ENST00000576218 LINC00208Q96KT6 92 aa7.09□□□□□ -1.27
SMG6-220ENST00000576218 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
SMG6-220ENST00000576218 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
SMG6-220ENST00000576218 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
SMG6-220ENST00000576218 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
SMG6-220ENST00000576218 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms