RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 A0A1B0GVX0 72 aa4.89□□□□□ -1.63
NPLOC4-212ENST00000573328 C9JAW5 83 aa4.89□□□□□ -1.63
NPLOC4-212ENST00000573328 C8orf87E5RJ46 101 aa4.89□□□□□ -1.63
NPLOC4-212ENST00000573328 BAALC-AS2P0C853 105 aa4.89□□□□□ -1.63
NPLOC4-212ENST00000573328 C21orf62-AS1Q17RA5 79 aa4.88□□□□□ -1.63
NPLOC4-212ENST00000573328 M0R143 59 aa4.87□□□□□ -1.63
NPLOC4-212ENST00000573328 NAA38Q9BRA0 125 aaKnown RBP4.87□□□□□ -1.63
NPLOC4-212ENST00000573328 J3KT08 172 aa4.86□□□□□ -1.63
NPLOC4-212ENST00000573328 ATXN8Q156A1 80 aa4.86□□□□□ -1.63
NPLOC4-212ENST00000573328 NDUFB1O75438 58 aa4.85□□□□□ -1.63
NPLOC4-212ENST00000573328 HRES1P13985 223 aa4.85□□□□□ -1.63
NPLOC4-212ENST00000573328 JMJD7-PLA2G4BH0Y9G9 81 aa4.84□□□□□ -1.63
NPLOC4-212ENST00000573328 Q6ZQT0 140 aa4.84□□□□□ -1.63
NPLOC4-212ENST00000573328 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
NPLOC4-212ENST00000573328 MTURNQ8N3F0 131 aa4.83□□□□□ -1.64
NPLOC4-212ENST00000573328 ZCCHC13Q8WW36 166 aaKnown RBP4.83□□□□□ -1.64
NPLOC4-212ENST00000573328 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
NPLOC4-212ENST00000573328 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
NPLOC4-212ENST00000573328 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
NPLOC4-212ENST00000573328 C14orf132Q9NPU4 83 aa4.81□□□□□ -1.64
NPLOC4-212ENST00000573328 LOC110117498A0A087WWA1 95 aa4.8□□□□□ -1.64
NPLOC4-212ENST00000573328 PDE6GP18545 87 aa4.8□□□□□ -1.64
NPLOC4-212ENST00000573328 C8orf17Q9NRJ1 99 aa4.8□□□□□ -1.64
NPLOC4-212ENST00000573328 A0A1B0GW54 56 aa4.79□□□□□ -1.64
NPLOC4-212ENST00000573328 A8MWP4 228 aa4.79□□□□□ -1.64
NPLOC4-212ENST00000573328 SPINK7P58062 85 aa4.79□□□□□ -1.64
NPLOC4-212ENST00000573328 BATFQ16520 125 aa4.79□□□□□ -1.64
NPLOC4-212ENST00000573328 MT2AP02795 61 aa4.78□□□□□ -1.64
NPLOC4-212ENST00000573328 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
NPLOC4-212ENST00000573328 TSTD3H0UI37 97 aa4.77□□□□□ -1.65
NPLOC4-212ENST00000573328 NREPQ16612 68 aa4.77□□□□□ -1.65
NPLOC4-212ENST00000573328 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
NPLOC4-212ENST00000573328 IGKV3D-7A0A0C4DH55 119 aa4.76□□□□□ -1.65
NPLOC4-212ENST00000573328 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
NPLOC4-212ENST00000573328 Q6ZVQ6 151 aa4.76□□□□□ -1.65
NPLOC4-212ENST00000573328 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
NPLOC4-212ENST00000573328 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
NPLOC4-212ENST00000573328 MT1FP04733 61 aa4.74□□□□□ -1.65
NPLOC4-212ENST00000573328 PRR15Q8IV56 129 aa4.74□□□□□ -1.65
NPLOC4-212ENST00000573328 NDUFS5O43920 106 aa4.73□□□□□ -1.65
NPLOC4-212ENST00000573328 TMEM254Q8TBM7 123 aa4.72□□□□□ -1.65
NPLOC4-212ENST00000573328 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
NPLOC4-212ENST00000573328 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
NPLOC4-212ENST00000573328 H3BT86 120 aa4.71□□□□□ -1.66
NPLOC4-212ENST00000573328 hDV103S1A0JD37 113 aa4.7□□□□□ -1.66
NPLOC4-212ENST00000573328 K7EQZ3 153 aa4.7□□□□□ -1.66
NPLOC4-212ENST00000573328 USH2AO75445 5202 aa4.69□□□□□ -1.66
NPLOC4-212ENST00000573328 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
NPLOC4-212ENST00000573328 A0A1W2PPM0 123 aa4.68□□□□□ -1.66
NPLOC4-212ENST00000573328 BPY2O14599 106 aa4.68□□□□□ -1.66
NPLOC4-212ENST00000573328 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
NPLOC4-212ENST00000573328 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
NPLOC4-212ENST00000573328 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
NPLOC4-212ENST00000573328 TAX1BP3O14907 124 aa4.66□□□□□ -1.66
NPLOC4-212ENST00000573328 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
NPLOC4-212ENST00000573328 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
NPLOC4-212ENST00000573328 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
NPLOC4-212ENST00000573328 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
NPLOC4-212ENST00000573328 Q8N9L7 120 aa4.63□□□□□ -1.67
NPLOC4-212ENST00000573328 SPCS1Q9Y6A9 102 aa4.63□□□□□ -1.67
NPLOC4-212ENST00000573328 HCG22E2RYF7 251 aa4.62□□□□□ -1.67
NPLOC4-212ENST00000573328 CASC2Q6XLA1 102 aa4.62□□□□□ -1.67
NPLOC4-212ENST00000573328 LOC105371267A0A1B0GV96 52 aa4.6□□□□□ -1.67
NPLOC4-212ENST00000573328 LINC00846Q9NV44 126 aa4.6□□□□□ -1.67
NPLOC4-212ENST00000573328 Q5W150 140 aa4.59□□□□□ -1.67
NPLOC4-212ENST00000573328 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
NPLOC4-212ENST00000573328 CXCL6P80162 114 aa4.56□□□□□ -1.68
NPLOC4-212ENST00000573328 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
NPLOC4-212ENST00000573328 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
NPLOC4-212ENST00000573328 COL5A1-AS1Q5SY13 56 aa4.55□□□□□ -1.68
NPLOC4-212ENST00000573328 K7EP34 96 aa4.52□□□□□ -1.69
NPLOC4-212ENST00000573328 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
NPLOC4-212ENST00000573328 PRO0461Q9UI25 63 aa4.51□□□□□ -1.69
NPLOC4-212ENST00000573328 FAM236AA0A1B0GUQ0 79 aa4.5□□□□□ -1.69
NPLOC4-212ENST00000573328 FAM236BA0A1B0GV22 79 aa4.5□□□□□ -1.69
NPLOC4-212ENST00000573328 C5orf47Q569G3 176 aa4.5□□□□□ -1.69
NPLOC4-212ENST00000573328 S4R3F8 94 aa4.49□□□□□ -1.69
NPLOC4-212ENST00000573328 GTF2H5Q6ZYL4 71 aa4.48□□□□□ -1.69
NPLOC4-212ENST00000573328 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
NPLOC4-212ENST00000573328 TP53AIP1Q9HCN2 124 aa4.46□□□□□ -1.7
NPLOC4-212ENST00000573328 F8W1H4 67 aa4.43□□□□□ -1.7
NPLOC4-212ENST00000573328 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
NPLOC4-212ENST00000573328 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
NPLOC4-212ENST00000573328 LCA10Q71F78 164 aa4.43□□□□□ -1.7
NPLOC4-212ENST00000573328 PCP4L1A6NKN8 68 aa4.42□□□□□ -1.7
NPLOC4-212ENST00000573328 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
NPLOC4-212ENST00000573328 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
NPLOC4-212ENST00000573328 H3BS24 57 aa4.41□□□□□ -1.7
NPLOC4-212ENST00000573328 TRAV22A0A0B4J277 110 aa4.38□□□□□ -1.71
NPLOC4-212ENST00000573328 Q5VV11 94 aa4.37□□□□□ -1.71
NPLOC4-212ENST00000573328 CYP4F30PQ9H0H9 118 aa4.36□□□□□ -1.71
NPLOC4-212ENST00000573328 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
NPLOC4-212ENST00000573328 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
NPLOC4-212ENST00000573328 A6NN06 94 aa4.35□□□□□ -1.71
NPLOC4-212ENST00000573328 ACYP1P07311 99 aa4.34□□□□□ -1.71
NPLOC4-212ENST00000573328 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
NPLOC4-212ENST00000573328 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
NPLOC4-212ENST00000573328 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
NPLOC4-212ENST00000573328 ATP5EP2Q5VTU8 51 aa4.33□□□□□ -1.72
NPLOC4-212ENST00000573328 MT1BP07438 61 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms