RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
SF3B3-214ENST00000572365 NREPQ16612 68 aa3.21□□□□□ -1.9
SF3B3-214ENST00000572365 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SF3B3-214ENST00000572365 ZFAND2AQ8N6M9 145 aa3.21□□□□□ -1.9
SF3B3-214ENST00000572365 SND1-IT1Q9HBX3 110 aa3.21□□□□□ -1.9
SF3B3-214ENST00000572365 IGHV3-64A0A075B6Q5 118 aa3.2□□□□□ -1.9
SF3B3-214ENST00000572365 ELOF1P60002 83 aaKnown RBP3.2□□□□□ -1.9
SF3B3-214ENST00000572365 MIR7-3HGQ8N6C7 128 aa3.2□□□□□ -1.9
SF3B3-214ENST00000572365 ZNF625Q96I27 306 aaPredicted RBP3.2□□□□□ -1.9
SF3B3-214ENST00000572365 C22orf24Q9Y442 160 aa3.2□□□□□ -1.9
SF3B3-214ENST00000572365 IGKV2D-24A0A075B6R9 120 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 BPY2O14599 106 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 LINC01556Q5JQF7 62 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 FAM74A4Q5TZK3 123 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 C11orf72Q8NBR9 251 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 SMIM11BQ8TCY0 68 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 RMI2Q96E14 147 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 RBM12B-AS1Q9P1G2 102 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 LINC00474Q9P2X8 69 aa3.19□□□□□ -1.9
SF3B3-214ENST00000572365 TRBV6-8A0A0A6YYG3 113 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 hDV103S1A0JD37 113 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 M0R378 163 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 NCR3O14931 201 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 SS18Q15532 418 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 LCA10Q71F78 164 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 SNURFQ9Y675 71 aa3.18□□□□□ -1.9
SF3B3-214ENST00000572365 IGHV3-73A0A0B4J1V6 119 aa3.17□□□□□ -1.9
SF3B3-214ENST00000572365 H3BPC8 53 aa3.17□□□□□ -1.9
SF3B3-214ENST00000572365 COX17Q14061 63 aa3.17□□□□□ -1.9
SF3B3-214ENST00000572365 Q6ZQT0 140 aa3.17□□□□□ -1.9
SF3B3-214ENST00000572365 C7orf65Q6ZTY9 151 aa3.17□□□□□ -1.9
SF3B3-214ENST00000572365 CDKN2A-AS1Q9UH64 79 aa3.17□□□□□ -1.9
SF3B3-214ENST00000572365 TRBV10-1A0A0K0K1A3 114 aa3.16□□□□□ -1.9
SF3B3-214ENST00000572365 GNRH2O43555 120 aa3.16□□□□□ -1.9
SF3B3-214ENST00000572365 ZNF73O43830 326 aaPredicted RBP3.16□□□□□ -1.9
SF3B3-214ENST00000572365 LINC00158P58513 81 aa3.16□□□□□ -1.9
SF3B3-214ENST00000572365 NTM-AS1Q6ZSK4 140 aa3.16□□□□□ -1.9
SF3B3-214ENST00000572365 COX7B2Q8TF08 81 aa3.16□□□□□ -1.9
SF3B3-214ENST00000572365 IGKV2-29A2NJV5 120 aaPredicted RBP3.15□□□□□ -1.91
SF3B3-214ENST00000572365 SOSTDC1Q6X4U4 206 aa3.15□□□□□ -1.91
SF3B3-214ENST00000572365 LINC00269Q8N2A0 174 aa3.15□□□□□ -1.91
SF3B3-214ENST00000572365 Q8N9L7 120 aa3.15□□□□□ -1.91
SF3B3-214ENST00000572365 DIRC1Q969H9 104 aa3.15□□□□□ -1.91
SF3B3-214ENST00000572365 CHCHD7Q9BUK0 85 aa3.15□□□□□ -1.91
SF3B3-214ENST00000572365 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
SF3B3-214ENST00000572365 TRAV22A0A0B4J277 110 aa3.14□□□□□ -1.91
SF3B3-214ENST00000572365 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
SF3B3-214ENST00000572365 PRR9Q5T870 116 aa3.14□□□□□ -1.91
SF3B3-214ENST00000572365 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.14□□□□□ -1.91
SF3B3-214ENST00000572365 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
SF3B3-214ENST00000572365 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
SF3B3-214ENST00000572365 FAM104AQ969W3 186 aa3.14□□□□□ -1.91
SF3B3-214ENST00000572365 IGKV2-28A0A075B6P5 120 aa3.13□□□□□ -1.91
SF3B3-214ENST00000572365 IGKV2D-28P01615 120 aa3.13□□□□□ -1.91
SF3B3-214ENST00000572365 COX7BP24311 80 aa3.13□□□□□ -1.91
SF3B3-214ENST00000572365 PRR3P79522 188 aaKnown RBP3.13□□□□□ -1.91
SF3B3-214ENST00000572365 SYCNQ0VAF6 134 aa3.13□□□□□ -1.91
SF3B3-214ENST00000572365 Q9BRP9 147 aa3.13□□□□□ -1.91
SF3B3-214ENST00000572365 MP68P56378 58 aa3.12□□□□□ -1.91
SF3B3-214ENST00000572365 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
SF3B3-214ENST00000572365 C9orf163Q8N9P6 203 aa3.12□□□□□ -1.91
SF3B3-214ENST00000572365 C1orf64Q8NEQ6 169 aa3.12□□□□□ -1.91
SF3B3-214ENST00000572365 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
SF3B3-214ENST00000572365 IGKV2-24A0A0C4DH68 120 aa3.11□□□□□ -1.91
SF3B3-214ENST00000572365 ETDCA0A1B0GVM5 59 aa3.11□□□□□ -1.91
SF3B3-214ENST00000572365 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
SF3B3-214ENST00000572365 CDC42SE2Q9NRR3 84 aa3.11□□□□□ -1.91
SF3B3-214ENST00000572365 LOC101927531A0A1B0GV80 90 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 HCG22E2RYF7 251 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 FAM229BQ4G0N7 80 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 CLPSL2Q6UWE3 100 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 SPINK6Q6UWN8 80 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 Q8IZM0 81 aa3.1□□□□□ -1.91
SF3B3-214ENST00000572365 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.09□□□□□ -1.91
SF3B3-214ENST00000572365 A6NED7 52 aa3.09□□□□□ -1.91
SF3B3-214ENST00000572365 COX6A2Q02221 97 aa3.09□□□□□ -1.91
SF3B3-214ENST00000572365 C15orf56Q8N910 161 aa3.09□□□□□ -1.91
SF3B3-214ENST00000572365 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 MUC17Q685J3 4493 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 A6NN06 94 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 A8MUN3 132 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 PSPHP1O15172 72 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 TLX1NBP0CAT3 122 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
SF3B3-214ENST00000572365 Q5VV11 94 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 CASC2Q6XLA1 102 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 SPACA4Q8TDM5 124 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 PLAC8Q9NZF1 115 aa3.08□□□□□ -1.92
SF3B3-214ENST00000572365 IGLV10-54A0A075B6I4 117 aa3.07□□□□□ -1.92
SF3B3-214ENST00000572365 IGKV4-1P06312 121 aa3.07□□□□□ -1.92
SF3B3-214ENST00000572365 DEFB116Q30KQ4 102 aa3.07□□□□□ -1.92
SF3B3-214ENST00000572365 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
SF3B3-214ENST00000572365 RETNLBQ9BQ08 111 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms