RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 MT1BP07438 61 aa7.39□□□□□ -1.23
CLK3-223ENST00000568488 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
CLK3-223ENST00000568488 Q5VV11 94 aa7.37□□□□□ -1.23
CLK3-223ENST00000568488 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
CLK3-223ENST00000568488 DLEU1O43261 78 aa7.36□□□□□ -1.23
CLK3-223ENST00000568488 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
CLK3-223ENST00000568488 LYRM7Q5U5X0 104 aa7.36□□□□□ -1.23
CLK3-223ENST00000568488 A0A1B0GVX0 72 aa7.35□□□□□ -1.23
CLK3-223ENST00000568488 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
CLK3-223ENST00000568488 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
CLK3-223ENST00000568488 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
CLK3-223ENST00000568488 A0A1B0GV72 72 aa7.33□□□□□ -1.24
CLK3-223ENST00000568488 H0YGX0 51 aa7.31□□□□□ -1.24
CLK3-223ENST00000568488 HIGD1BQ9P298 99 aa7.3□□□□□ -1.24
CLK3-223ENST00000568488 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
CLK3-223ENST00000568488 FAM236AA0A1B0GUQ0 79 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 FAM236BA0A1B0GV22 79 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 SPRR2EP22531 72 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 SPRR2BP35325 72 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 SPRR2AP35326 72 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 KRTAP2-2Q9BYT5 123 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 KRTAP2-1Q9BYU5 128 aa7.29□□□□□ -1.24
CLK3-223ENST00000568488 TRACP01848 142 aa7.28□□□□□ -1.24
CLK3-223ENST00000568488 CCKP06307 115 aa7.26□□□□□ -1.25
CLK3-223ENST00000568488 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
CLK3-223ENST00000568488 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
CLK3-223ENST00000568488 TSTD3H0UI37 97 aa7.24□□□□□ -1.25
CLK3-223ENST00000568488 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
CLK3-223ENST00000568488 DSCR8Q96T75 97 aa7.23□□□□□ -1.25
CLK3-223ENST00000568488 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
CLK3-223ENST00000568488 HSD52Q0P140 79 aa7.21□□□□□ -1.26
CLK3-223ENST00000568488 CEND1Q8N111 149 aa7.21□□□□□ -1.26
CLK3-223ENST00000568488 A0A1B0GX51 115 aa7.2□□□□□ -1.26
CLK3-223ENST00000568488 FXYD2P54710 66 aa7.2□□□□□ -1.26
CLK3-223ENST00000568488 VPS25Q9BRG1 176 aa7.2□□□□□ -1.26
CLK3-223ENST00000568488 IMUPQ9GZP8 106 aa7.2□□□□□ -1.26
CLK3-223ENST00000568488 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
CLK3-223ENST00000568488 NDUFB1O75438 58 aa7.17□□□□□ -1.26
CLK3-223ENST00000568488 J3KT08 172 aa7.16□□□□□ -1.26
CLK3-223ENST00000568488 PCP4L1A6NKN8 68 aa7.15□□□□□ -1.26
CLK3-223ENST00000568488 C5orf47Q569G3 176 aa7.15□□□□□ -1.26
CLK3-223ENST00000568488 C8orf17Q9NRJ1 99 aa7.14□□□□□ -1.27
CLK3-223ENST00000568488 ORMDL1Q9P0S3 153 aa7.14□□□□□ -1.27
CLK3-223ENST00000568488 A0A0B4J2C4 111 aa7.12□□□□□ -1.27
CLK3-223ENST00000568488 K7ERJ3 54 aa7.12□□□□□ -1.27
CLK3-223ENST00000568488 DNAL4O96015 105 aa7.12□□□□□ -1.27
CLK3-223ENST00000568488 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
CLK3-223ENST00000568488 A6NJY4 79 aa7.1□□□□□ -1.27
CLK3-223ENST00000568488 M0R143 59 aa7.1□□□□□ -1.27
CLK3-223ENST00000568488 H3BQ85 93 aa7.09□□□□□ -1.27
CLK3-223ENST00000568488 TMEM256-PLSCR3K7ERE1 68 aa7.09□□□□□ -1.27
CLK3-223ENST00000568488 Q6ZVQ6 151 aa7.09□□□□□ -1.27
CLK3-223ENST00000568488 BATFQ16520 125 aa7.08□□□□□ -1.28
CLK3-223ENST00000568488 PRO1854Q9UHT4 67 aa7.08□□□□□ -1.28
CLK3-223ENST00000568488 IGKV2D-30A0A075B6S6 120 aa7.07□□□□□ -1.28
CLK3-223ENST00000568488 IGKV2-30P06310 120 aa7.07□□□□□ -1.28
CLK3-223ENST00000568488 GPR98Q8WXG9 6306 aa7.06□□□□□ -1.28
CLK3-223ENST00000568488 TRIAP1O43715 76 aa7.05□□□□□ -1.28
CLK3-223ENST00000568488 SPRR2DP22532 72 aa7.05□□□□□ -1.28
CLK3-223ENST00000568488 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
CLK3-223ENST00000568488 TAX1BP3O14907 124 aa7.02□□□□□ -1.29
CLK3-223ENST00000568488 RBM3P98179 157 aaKnown RBP7.01□□□□□ -1.29
CLK3-223ENST00000568488 UBE2V1Q13404 147 aa7.01□□□□□ -1.29
CLK3-223ENST00000568488 C4orf26Q17RF5 130 aa7.01□□□□□ -1.29
CLK3-223ENST00000568488 NAA38Q9BRA0 125 aaKnown RBP7.01□□□□□ -1.29
CLK3-223ENST00000568488 NDUFS5O43920 106 aa7□□□□□ -1.29
CLK3-223ENST00000568488 Q6ZQT0 140 aa7□□□□□ -1.29
CLK3-223ENST00000568488 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
CLK3-223ENST00000568488 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
CLK3-223ENST00000568488 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
CLK3-223ENST00000568488 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
CLK3-223ENST00000568488 KLKP1Q107X0 134 aa6.98□□□□□ -1.29
CLK3-223ENST00000568488 COL5A1-AS1Q5SY13 56 aa6.98□□□□□ -1.29
CLK3-223ENST00000568488 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
CLK3-223ENST00000568488 C9orf118A6NHY6 69 aa6.97□□□□□ -1.29
CLK3-223ENST00000568488 SMCPP49901 116 aaPredicted RBP6.97□□□□□ -1.29
CLK3-223ENST00000568488 PSMB2P49721 201 aa6.96□□□□□ -1.3
CLK3-223ENST00000568488 TMEM254Q8TBM7 123 aa6.96□□□□□ -1.3
CLK3-223ENST00000568488 S4R3F8 94 aa6.95□□□□□ -1.3
CLK3-223ENST00000568488 C9JAW5 83 aa6.94□□□□□ -1.3
CLK3-223ENST00000568488 PRR15Q8IV56 129 aa6.92□□□□□ -1.3
CLK3-223ENST00000568488 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
CLK3-223ENST00000568488 A0A1W2PPM0 123 aa6.91□□□□□ -1.3
CLK3-223ENST00000568488 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
CLK3-223ENST00000568488 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
CLK3-223ENST00000568488 Q5W150 140 aa6.91□□□□□ -1.3
CLK3-223ENST00000568488 COX6CP09669 75 aa6.9□□□□□ -1.3
CLK3-223ENST00000568488 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
CLK3-223ENST00000568488 LCA10Q71F78 164 aa6.88□□□□□ -1.31
CLK3-223ENST00000568488 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
CLK3-223ENST00000568488 ATXN8Q156A1 80 aa6.84□□□□□ -1.31
CLK3-223ENST00000568488 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
CLK3-223ENST00000568488 SPCS1Q9Y6A9 102 aa6.84□□□□□ -1.31
CLK3-223ENST00000568488 K7EP34 96 aa6.82□□□□□ -1.32
CLK3-223ENST00000568488 CRIPTQ9P021 101 aa6.82□□□□□ -1.32
CLK3-223ENST00000568488 A0A1B0GV90 55 aa6.8□□□□□ -1.32
CLK3-223ENST00000568488 K7EQZ3 153 aa6.8□□□□□ -1.32
CLK3-223ENST00000568488 BAALC-AS2P0C853 105 aa6.8□□□□□ -1.32
CLK3-223ENST00000568488 NREPQ16612 68 aa6.79□□□□□ -1.32
CLK3-223ENST00000568488 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms