RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 ATRQ13535 2644 aa0.43□□□□□ -2.34
TCF4-239ENST00000568186 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
TCF4-239ENST00000568186 PRM1P04553 51 aa0.43□□□□□ -2.34
TCF4-239ENST00000568186 LEAP2Q969E1 77 aa0.43□□□□□ -2.34
TCF4-239ENST00000568186 LYSTQ99698 3801 aa0.43□□□□□ -2.34
TCF4-239ENST00000568186 PDZD2O15018 2839 aa0.43□□□□□ -2.34
TCF4-239ENST00000568186 UBR5O95071 2799 aaPredicted RBP0.43□□□□□ -2.34
TCF4-239ENST00000568186 CELSR1Q9NYQ6 3014 aa0.43□□□□□ -2.34
TCF4-239ENST00000568186 H3BSH0 61 aa0.42□□□□□ -2.34
TCF4-239ENST00000568186 NOP10Q9NPE3 64 aaKnown RBP0.42□□□□□ -2.34
TCF4-239ENST00000568186 ACACAQ13085 2346 aa0.42□□□□□ -2.34
TCF4-239ENST00000568186 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
TCF4-239ENST00000568186 SSPOA2VEC9 5147 aa0.41□□□□□ -2.34
TCF4-239ENST00000568186 CREBBPQ92793 2442 aa0.41□□□□□ -2.34
TCF4-239ENST00000568186 LINC01590Q5TEZ4 76 aa0.41□□□□□ -2.34
TCF4-239ENST00000568186 CLPSL2Q6UWE3 100 aa0.41□□□□□ -2.34
TCF4-239ENST00000568186 TOMM7Q9P0U1 55 aa0.41□□□□□ -2.34
TCF4-239ENST00000568186 EP300Q09472 2414 aaPredicted RBP0.4□□□□□ -2.34
TCF4-239ENST00000568186 NBASA2RRP1 2371 aa0.4□□□□□ -2.34
TCF4-239ENST00000568186 CCDC168Q8NDH2 2452 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 RYR1P21817 5038 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 A8MTW9 85 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 H0YGG7 62 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 M0QY20 66 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 PRCDQ00LT1 54 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 SPTBN4Q9H254 2564 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 FAT2Q9NYQ8 4349 aa0.4□□□□□ -2.35
TCF4-239ENST00000568186 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
TCF4-239ENST00000568186 TNRC18O15417 2968 aaPredicted RBP0.39□□□□□ -2.35
TCF4-239ENST00000568186 HECTD1Q9ULT8 2610 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 NAV2Q8IVL1 2488 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 BSNQ9UPA5 3926 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 FLNCQ14315 2725 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 PKD1L1Q8TDX9 2849 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 PKD1L2Q7Z442 2459 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 CHD8Q9HCK8 2581 aa0.39□□□□□ -2.35
TCF4-239ENST00000568186 DEFB104AQ8WTQ1 72 aa0.38□□□□□ -2.35
TCF4-239ENST00000568186 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
TCF4-239ENST00000568186 WNK1Q9H4A3 2382 aa0.38□□□□□ -2.35
TCF4-239ENST00000568186 NF1P21359 2839 aa0.37□□□□□ -2.35
TCF4-239ENST00000568186 PRKDCP78527 4128 aaKnown RBP0.37□□□□□ -2.35
TCF4-239ENST00000568186 VPS13BQ7Z7G8 4022 aa0.37□□□□□ -2.35
TCF4-239ENST00000568186 ITPR3Q14573 2671 aa0.37□□□□□ -2.35
TCF4-239ENST00000568186 GCN1Q92616 2671 aaKnown RBP0.37□□□□□ -2.35
TCF4-239ENST00000568186 MGAQ8IWI9 3026 aa0.37□□□□□ -2.35
TCF4-239ENST00000568186 KMT2CQ8NEZ4 4911 aaKnown RBP0.37□□□□□ -2.35
TCF4-239ENST00000568186 KRTAP20-1Q3LI63 56 aa0.37□□□□□ -2.35
TCF4-239ENST00000568186 ANKRD11Q6UB99 2663 aaPredicted RBP0.37□□□□□ -2.35
TCF4-239ENST00000568186 M0QZ58 72 aa0.36□□□□□ -2.35
TCF4-239ENST00000568186 DCHS2Q6V1P9 2916 aa0.36□□□□□ -2.35
TCF4-239ENST00000568186 ZZEF1O43149 2961 aa0.36□□□□□ -2.35
TCF4-239ENST00000568186 RYR2Q92736 4967 aa0.35□□□□□ -2.35
TCF4-239ENST00000568186 USP9YO00507 2555 aaPredicted RBP0.35□□□□□ -2.35
TCF4-239ENST00000568186 SPRR2DP22532 72 aa0.35□□□□□ -2.35
TCF4-239ENST00000568186 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
TCF4-239ENST00000568186 SETD2Q9BYW2 2564 aaPredicted RBP0.35□□□□□ -2.35
TCF4-239ENST00000568186 STAB1Q9NY15 2570 aa0.35□□□□□ -2.35
TCF4-239ENST00000568186 APC2O95996 2303 aa0.35□□□□□ -2.35
TCF4-239ENST00000568186 MYCBP2O75592 4640 aa0.34□□□□□ -2.35
TCF4-239ENST00000568186 FRYQ5TBA9 3013 aa0.34□□□□□ -2.35
TCF4-239ENST00000568186 K7EIM0 57 aa0.34□□□□□ -2.36
TCF4-239ENST00000568186 TMEM167AQ8TBQ9 72 aa0.34□□□□□ -2.36
TCF4-239ENST00000568186 SETXQ7Z333 2677 aaKnown RBP0.34□□□□□ -2.36
TCF4-239ENST00000568186 LRRK2Q5S007 2527 aa0.34□□□□□ -2.36
TCF4-239ENST00000568186 TACC2O95359 2948 aa0.34□□□□□ -2.36
TCF4-239ENST00000568186 NBEAL2Q6ZNJ1 2754 aa0.34□□□□□ -2.36
TCF4-239ENST00000568186 CRYBG3Q68DQ2 2970 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 NCOR2Q9Y618 2525 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 DMXL1Q9Y485 3027 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 ACANP16112 2415 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 C9orf92A6NGG3 77 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 H3BNG1 76 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 TNP1P09430 55 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 RPL39P5Q59GN2 51 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
TCF4-239ENST00000568186 KMT2AQ03164 3969 aa0.33□□□□□ -2.36
TCF4-239ENST00000568186 DMBT1Q9UGM3 2413 aaPredicted RBP0.33□□□□□ -2.36
TCF4-239ENST00000568186 NSD1Q96L73 2696 aaPredicted RBP0.32□□□□□ -2.36
TCF4-239ENST00000568186 LPAP08519 4548 aa0.32□□□□□ -2.36
TCF4-239ENST00000568186 ANKHD1Q8IWZ3 2542 aaKnown RBP0.32□□□□□ -2.36
TCF4-239ENST00000568186 FLNBO75369 2602 aaKnown RBP0.32□□□□□ -2.36
TCF4-239ENST00000568186 SACSQ9NZJ4 4579 aa0.32□□□□□ -2.36
TCF4-239ENST00000568186 NBPF19A0A087WUL8 3843 aa0.32□□□□□ -2.36
TCF4-239ENST00000568186 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
TCF4-239ENST00000568186 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
TCF4-239ENST00000568186 NBEAQ8NFP9 2946 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 MTORP42345 2549 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 KALRNO60229 2985 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 ZANQ9Y493 2812 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 DEFB108AA8MXU0 73 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 DEFB110Q30KQ9 67 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 RIF1Q5UIP0 2472 aaKnown RBP0.31□□□□□ -2.36
TCF4-239ENST00000568186 HIVEP1P15822 2718 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 FAM186AA6NE01 2351 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 LRBAP50851 2863 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 WDR87Q6ZQQ6 2873 aa0.31□□□□□ -2.36
TCF4-239ENST00000568186 SPENQ96T58 3664 aaKnown RBP0.31□□□□□ -2.36
TCF4-239ENST00000568186 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms