RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 BSNQ9UPA5 3926 aa2.99□□□□□ -1.93
SMG1-211ENST00000565324 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
SMG1-211ENST00000565324 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
SMG1-211ENST00000565324 LRBAP50851 2863 aa2.99□□□□□ -1.93
SMG1-211ENST00000565324 SPENQ96T58 3664 aaKnown RBP2.98□□□□□ -1.93
SMG1-211ENST00000565324 FLNCQ14315 2725 aa2.97□□□□□ -1.93
SMG1-211ENST00000565324 NBEAL2Q6ZNJ1 2754 aa2.96□□□□□ -1.93
SMG1-211ENST00000565324 A8MUU9 505 aa2.96□□□□□ -1.94
SMG1-211ENST00000565324 FLNBO75369 2602 aaKnown RBP2.95□□□□□ -1.94
SMG1-211ENST00000565324 TNP1P09430 55 aa2.95□□□□□ -1.94
SMG1-211ENST00000565324 FRYQ5TBA9 3013 aa2.95□□□□□ -1.94
SMG1-211ENST00000565324 KRTAP1-1Q07627 177 aa2.95□□□□□ -1.94
SMG1-211ENST00000565324 KRTAP1-3Q8IUG1 177 aa2.95□□□□□ -1.94
SMG1-211ENST00000565324 RELNP78509 3460 aa2.94□□□□□ -1.94
SMG1-211ENST00000565324 SMG1Q96Q15 3661 aaKnown RBP2.93□□□□□ -1.94
SMG1-211ENST00000565324 AKAP9Q99996 3911 aa2.93□□□□□ -1.94
SMG1-211ENST00000565324 Q5VSD8 79 aa2.93□□□□□ -1.94
SMG1-211ENST00000565324 KALRNO60229 2985 aa2.93□□□□□ -1.94
SMG1-211ENST00000565324 BOD1L1Q8NFC6 3051 aa2.93□□□□□ -1.94
SMG1-211ENST00000565324 KRTAP11-1Q8IUC1 163 aa2.92□□□□□ -1.94
SMG1-211ENST00000565324 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
SMG1-211ENST00000565324 NBPF19A0A087WUL8 3843 aa2.91□□□□□ -1.94
SMG1-211ENST00000565324 IGSF10Q6WRI0 2623 aa2.91□□□□□ -1.94
SMG1-211ENST00000565324 DMXL2Q8TDJ6 3036 aa2.91□□□□□ -1.94
SMG1-211ENST00000565324 CSMD1Q96PZ7 3565 aa2.91□□□□□ -1.94
SMG1-211ENST00000565324 NOTCH2NLQ7Z3S9 236 aa2.9□□□□□ -1.94
SMG1-211ENST00000565324 KRTAP1-5Q9BYS1 174 aa2.9□□□□□ -1.94
SMG1-211ENST00000565324 NF1P21359 2839 aa2.9□□□□□ -1.95
SMG1-211ENST00000565324 ATMQ13315 3056 aa2.9□□□□□ -1.95
SMG1-211ENST00000565324 NBEAQ8NFP9 2946 aa2.89□□□□□ -1.95
SMG1-211ENST00000565324 A8MU10 97 aa2.89□□□□□ -1.95
SMG1-211ENST00000565324 ZFHX3Q15911 3703 aa2.88□□□□□ -1.95
SMG1-211ENST00000565324 NIPBLQ6KC79 2804 aaeCLIP2.87□□□□□ -1.957e-6■□□□□ 10.5
SMG1-211ENST00000565324 KRTAP10-1P60331 282 aa2.86□□□□□ -1.95
SMG1-211ENST00000565324 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
SMG1-211ENST00000565324 KRTAP10-2P60368 255 aa2.85□□□□□ -1.95
SMG1-211ENST00000565324 COL12A1Q99715 3063 aa2.84□□□□□ -1.95
SMG1-211ENST00000565324 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
SMG1-211ENST00000565324 CSMD2Q7Z408 3487 aa2.84□□□□□ -1.96
SMG1-211ENST00000565324 MXRA5Q9NR99 2828 aa2.84□□□□□ -1.96
SMG1-211ENST00000565324 P0C880 135 aa2.83□□□□□ -1.96
SMG1-211ENST00000565324 CRYBG3Q68DQ2 2970 aa2.83□□□□□ -1.96
SMG1-211ENST00000565324 PKD1L1Q8TDX9 2849 aa2.83□□□□□ -1.96
SMG1-211ENST00000565324 TGP01266 2768 aa2.83□□□□□ -1.96
SMG1-211ENST00000565324 ZZEF1O43149 2961 aa2.82□□□□□ -1.96
SMG1-211ENST00000565324 PDZD2O15018 2839 aa2.81□□□□□ -1.96
SMG1-211ENST00000565324 KRTAP13-1Q8IUC0 172 aa2.8□□□□□ -1.96
SMG1-211ENST00000565324 ADGRG4Q8IZF6 3080 aa2.79□□□□□ -1.96
SMG1-211ENST00000565324 VWFP04275 2813 aa2.79□□□□□ -1.96
SMG1-211ENST00000565324 VPS13CQ709C8 3753 aa2.78□□□□□ -1.96
SMG1-211ENST00000565324 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.96
SMG1-211ENST00000565324 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
SMG1-211ENST00000565324 ZANQ9Y493 2812 aa2.77□□□□□ -1.97
SMG1-211ENST00000565324 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
SMG1-211ENST00000565324 KRTAP13-2Q52LG2 175 aa2.77□□□□□ -1.97
SMG1-211ENST00000565324 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
SMG1-211ENST00000565324 H0YAA0 97 aa2.76□□□□□ -1.97
SMG1-211ENST00000565324 CELSR2Q9HCU4 2923 aa2.76□□□□□ -1.97
SMG1-211ENST00000565324 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
SMG1-211ENST00000565324 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
SMG1-211ENST00000565324 HIVEP1P15822 2718 aa2.74□□□□□ -1.97
SMG1-211ENST00000565324 DCHS2Q6V1P9 2916 aa2.71□□□□□ -1.98
SMG1-211ENST00000565324 KRTAP7-1Q8IUC3 87 aa2.71□□□□□ -1.98
SMG1-211ENST00000565324 TENM2Q9NT68 2774 aa2.69□□□□□ -1.98
SMG1-211ENST00000565324 ZNF469Q96JG9 3925 aaPredicted RBP2.68□□□□□ -1.98
SMG1-211ENST00000565324 TENM3Q9P273 2699 aa2.68□□□□□ -1.98
SMG1-211ENST00000565324 FBN2P35556 2912 aa2.68□□□□□ -1.98
SMG1-211ENST00000565324 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
SMG1-211ENST00000565324 CUBNO60494 3623 aa2.66□□□□□ -1.98
SMG1-211ENST00000565324 XP32Q5T750 250 aa2.66□□□□□ -1.98
SMG1-211ENST00000565324 CELSR1Q9NYQ6 3014 aa2.64□□□□□ -1.99
SMG1-211ENST00000565324 KRTAP21-3Q3LHN1 58 aa2.63□□□□□ -1.99
SMG1-211ENST00000565324 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
SMG1-211ENST00000565324 INE1O15225 51 aa2.62□□□□□ -1.99
SMG1-211ENST00000565324 CMYA5Q8N3K9 4069 aa2.62□□□□□ -1.99
SMG1-211ENST00000565324 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
SMG1-211ENST00000565324 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
SMG1-211ENST00000565324 KRTAP10-10P60014 251 aa2.59□□□□□ -1.99
SMG1-211ENST00000565324 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
SMG1-211ENST00000565324 HECTD4Q9Y4D8 3996 aa2.56□□□□□ -2
SMG1-211ENST00000565324 A0A1B0GVY2 172 aa2.56□□□□□ -2
SMG1-211ENST00000565324 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
SMG1-211ENST00000565324 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
SMG1-211ENST00000565324 LYSTQ99698 3801 aa2.54□□□□□ -2
SMG1-211ENST00000565324 KRTAP12-2P59991 146 aa2.54□□□□□ -2
SMG1-211ENST00000565324 COL7A1Q02388 2944 aa2.54□□□□□ -2
SMG1-211ENST00000565324 MEGF8Q7Z7M0 2845 aa2.53□□□□□ -2
SMG1-211ENST00000565324 KRTAP12-1P59990 96 aa2.53□□□□□ -2.01
SMG1-211ENST00000565324 ANK2Q01484 3957 aa2.52□□□□□ -2.01
SMG1-211ENST00000565324 DNAH7Q8WXX0 4024 aa2.51□□□□□ -2.01
SMG1-211ENST00000565324 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
SMG1-211ENST00000565324 ANK3Q12955 4377 aaKnown RBP2.5□□□□□ -2.01
SMG1-211ENST00000565324 OTOGQ6ZRI0 2925 aa2.49□□□□□ -2.01
SMG1-211ENST00000565324 KRTAP15-1Q3LI76 137 aa2.47□□□□□ -2.01
SMG1-211ENST00000565324 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
SMG1-211ENST00000565324 KRTAP23-1A1A580 65 aa2.37□□□□□ -2.03
SMG1-211ENST00000565324 KRTAP10-6P60371 365 aaPredicted RBP2.36□□□□□ -2.03
SMG1-211ENST00000565324 KRTAP3-1Q9BYR8 98 aa2.35□□□□□ -2.03
SMG1-211ENST00000565324 KRTAP10-12P60413 245 aa2.34□□□□□ -2.04
SMG1-211ENST00000565324 CSMD3Q7Z407 3707 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms