RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 PKHD1L1Q86WI1 4243 aa14.48□□□□□ -0.09
LINC01003-201ENST00000564834 C1orf195Q5TG92 126 aa14.47□□□□□ -0.09
LINC01003-201ENST00000564834 LINC00304Q8N9R0 145 aa14.47□□□□□ -0.09
LINC01003-201ENST00000564834 CYSTM1Q9H1C7 97 aa14.47□□□□□ -0.09
LINC01003-201ENST00000564834 KLKP1Q107X0 134 aa14.45□□□□□ -0.1
LINC01003-201ENST00000564834 SPAG11AQ6PDA7 123 aa14.45□□□□□ -0.1
LINC01003-201ENST00000564834 RPS29P62273 56 aaKnown RBP14.45□□□□□ -0.1
LINC01003-201ENST00000564834 Q5VSD8 79 aa14.44□□□□□ -0.1
LINC01003-201ENST00000564834 TMEM254Q8TBM7 123 aa14.43□□□□□ -0.1
LINC01003-201ENST00000564834 RYR1P21817 5038 aa14.41□□□□□ -0.1
LINC01003-201ENST00000564834 SNURFQ9Y675 71 aa14.39□□□□□ -0.11
LINC01003-201ENST00000564834 NOTCH2NLQ7Z3S9 236 aa14.38□□□□□ -0.11
LINC01003-201ENST00000564834 TMEM258P61165 79 aa14.37□□□□□ -0.11
LINC01003-201ENST00000564834 C5orf47Q569G3 176 aa14.37□□□□□ -0.11
LINC01003-201ENST00000564834 C8orf87E5RJ46 101 aa14.35□□□□□ -0.11
LINC01003-201ENST00000564834 A0A0U1RQV1 116 aa14.34□□□□□ -0.11
LINC01003-201ENST00000564834 MRPL34Q9BQ48 92 aaKnown RBP14.34□□□□□ -0.11
LINC01003-201ENST00000564834 KIAA1109Q2LD37 5005 aa14.31□□□□□ -0.12
LINC01003-201ENST00000564834 H7BZZ5 65 aa14.29□□□□□ -0.12
LINC01003-201ENST00000564834 TP53AIP1Q9HCN2 124 aa14.29□□□□□ -0.12
LINC01003-201ENST00000564834 NDUFC1O43677 76 aa14.28□□□□□ -0.12
LINC01003-201ENST00000564834 LINC00313P59037 77 aa14.27□□□□□ -0.13
LINC01003-201ENST00000564834 MP68P56378 58 aa14.25□□□□□ -0.13
LINC01003-201ENST00000564834 NDUFS5O43920 106 aa14.23□□□□□ -0.13
LINC01003-201ENST00000564834 KRTAP17-1Q9BYP8 105 aa14.22□□□□□ -0.13
LINC01003-201ENST00000564834 ZCCHC13Q8WW36 166 aaKnown RBP14.22□□□□□ -0.13
LINC01003-201ENST00000564834 TRAV22A0A0B4J277 110 aa14.21□□□□□ -0.13
LINC01003-201ENST00000564834 H0Y9P7 68 aa14.21□□□□□ -0.13
LINC01003-201ENST00000564834 Q8N1X5 172 aa14.21□□□□□ -0.13
LINC01003-201ENST00000564834 H3BPC8 53 aa14.19□□□□□ -0.14
LINC01003-201ENST00000564834 RPS28P62857 69 aaKnown RBP14.16□□□□□ -0.14
LINC01003-201ENST00000564834 LRP1Q07954 4544 aaKnown RBP14.16□□□□□ -0.14
LINC01003-201ENST00000564834 KRTAP10-8P60410 259 aa14.15□□□□□ -0.14
LINC01003-201ENST00000564834 LINC00208Q96KT6 92 aa14.15□□□□□ -0.14
LINC01003-201ENST00000564834 TNXBP22105 4242 aa14.15□□□□□ -0.14
LINC01003-201ENST00000564834 FLG2Q5D862 2391 aaPredicted RBP14.14□□□□□ -0.15
LINC01003-201ENST00000564834 KRTAP16-1A8MUX0 517 aa14.11□□□□□ -0.15
LINC01003-201ENST00000564834 Q8N9P0 234 aaPredicted RBP14.11□□□□□ -0.15
LINC01003-201ENST00000564834 BIRC6Q9NR09 4857 aa14.11□□□□□ -0.15
LINC01003-201ENST00000564834 FAM236DA0A1B0GTK5 79 aa14.09□□□□□ -0.15
LINC01003-201ENST00000564834 FAM236CP0DP71 79 aa14.09□□□□□ -0.15
LINC01003-201ENST00000564834 C1orf64Q8NEQ6 169 aa14.07□□□□□ -0.16
LINC01003-201ENST00000564834 FAT3Q8TDW7 4589 aa14.07□□□□□ -0.16
LINC01003-201ENST00000564834 ATP5EP56381 51 aaPredicted RBP14.04□□□□□ -0.16
LINC01003-201ENST00000564834 KRTAP13-3Q3SY46 172 aa13.99□□□□□ -0.17
LINC01003-201ENST00000564834 Q5W150 140 aa13.99□□□□□ -0.17
LINC01003-201ENST00000564834 RETNLBQ9BQ08 111 aa13.99□□□□□ -0.17
LINC01003-201ENST00000564834 DMBT1Q9UGM3 2413 aaPredicted RBP13.93□□□□□ -0.18
LINC01003-201ENST00000564834 MYCBP2O75592 4640 aa13.93□□□□□ -0.18
LINC01003-201ENST00000564834 SERP1Q9Y6X1 66 aa13.92□□□□□ -0.18
LINC01003-201ENST00000564834 MT1HL1P0DM35 61 aa13.91□□□□□ -0.18
LINC01003-201ENST00000564834 LOC101927531A0A1B0GV80 90 aa13.9□□□□□ -0.18
LINC01003-201ENST00000564834 HERC2O95714 4834 aa13.86□□□□□ -0.19
LINC01003-201ENST00000564834 C9orf92A6NGG3 77 aa13.86□□□□□ -0.19
LINC01003-201ENST00000564834 KRTAP4-5Q9BYR2 181 aa13.86□□□□□ -0.19
LINC01003-201ENST00000564834 SPANXA2-OT1Q8N9U9 137 aa13.85□□□□□ -0.19
LINC01003-201ENST00000564834 OXTP01178 125 aa13.83□□□□□ -0.2
LINC01003-201ENST00000564834 FP248Q71RG6 208 aaPredicted RBP13.83□□□□□ -0.2
LINC01003-201ENST00000564834 PCOTHQ58A44 107 aa13.81□□□□□ -0.2
LINC01003-201ENST00000564834 C20orf166-AS1Q96NR2 134 aa13.8□□□□□ -0.2
LINC01003-201ENST00000564834 CYP4F30PQ9H0H9 118 aa13.78□□□□□ -0.2
LINC01003-201ENST00000564834 A8MUU9 505 aa13.78□□□□□ -0.2
LINC01003-201ENST00000564834 PRR4Q16378 134 aa13.75□□□□□ -0.21
LINC01003-201ENST00000564834 IGKV2-30P06310 120 aa13.74□□□□□ -0.21
LINC01003-201ENST00000564834 IGLV7-46A0A075B6I9 117 aa13.73□□□□□ -0.21
LINC01003-201ENST00000564834 ABCA13Q86UQ4 5058 aa13.7□□□□□ -0.22
LINC01003-201ENST00000564834 Q75L30 129 aa13.64□□□□□ -0.23
LINC01003-201ENST00000564834 IGKV2D-30A0A075B6S6 120 aa13.63□□□□□ -0.23
LINC01003-201ENST00000564834 SMIM26A0A096LP01 95 aa13.63□□□□□ -0.23
LINC01003-201ENST00000564834 HRES1P13985 223 aa13.57□□□□□ -0.24
LINC01003-201ENST00000564834 C7orf65Q6ZTY9 151 aa13.56□□□□□ -0.24
LINC01003-201ENST00000564834 XP32Q5T750 250 aa13.49□□□□□ -0.25
LINC01003-201ENST00000564834 RPL37P61927 97 aaKnown RBP13.45□□□□□ -0.26
LINC01003-201ENST00000564834 COA5Q86WW8 74 aa13.43□□□□□ -0.26
LINC01003-201ENST00000564834 DMAC1Q96GE9 116 aa13.43□□□□□ -0.26
LINC01003-201ENST00000564834 ATP11AUNQ6ZP68 121 aa13.42□□□□□ -0.26
LINC01003-201ENST00000564834 TPRXLQ17RH7 258 aa13.41□□□□□ -0.26
LINC01003-201ENST00000564834 PCLOQ9Y6V0 5065 aa13.4□□□□□ -0.27
LINC01003-201ENST00000564834 J3QL48 77 aa13.39□□□□□ -0.27
LINC01003-201ENST00000564834 C4orf26Q17RF5 130 aa13.37□□□□□ -0.27
LINC01003-201ENST00000564834 ACYP2P14621 99 aa13.37□□□□□ -0.27
LINC01003-201ENST00000564834 SPINK7P58062 85 aa13.36□□□□□ -0.27
LINC01003-201ENST00000564834 Q1T7F1 81 aa13.24□□□□□ -0.29
LINC01003-201ENST00000564834 MPLKIPQ8TAP9 179 aa13.24□□□□□ -0.29
LINC01003-201ENST00000564834 SVIPQ8NHG7 77 aa13.23□□□□□ -0.29
LINC01003-201ENST00000564834 A8MUN3 132 aa13.22□□□□□ -0.29
LINC01003-201ENST00000564834 V9GYY9 64 aa13.18□□□□□ -0.3
LINC01003-201ENST00000564834 CHKB-CPT1BH3BT56 60 aa13.15□□□□□ -0.3
LINC01003-201ENST00000564834 LRP2P98164 4655 aa13.14□□□□□ -0.31
LINC01003-201ENST00000564834 LPAP08519 4548 aa13.13□□□□□ -0.31
LINC01003-201ENST00000564834 COX6B2Q6YFQ2 88 aa13.07□□□□□ -0.32
LINC01003-201ENST00000564834 KRTAP3-1Q9BYR8 98 aa13.07□□□□□ -0.32
LINC01003-201ENST00000564834 HERC1Q15751 4861 aa12.99□□□□□ -0.33
LINC01003-201ENST00000564834 LINC01558Q9Y6Z2 57 aa12.97□□□□□ -0.33
LINC01003-201ENST00000564834 PSPHP1O15172 72 aa12.94□□□□□ -0.34
LINC01003-201ENST00000564834 SEC61BP60468 96 aaKnown RBP12.92□□□□□ -0.34
LINC01003-201ENST00000564834 PRR15LQ9BU68 103 aa12.89□□□□□ -0.35
LINC01003-201ENST00000564834 PRO0628Q9UI54 55 aa12.86□□□□□ -0.35
LINC01003-201ENST00000564834 Q5VV11 94 aa12.84□□□□□ -0.35
LINC01003-201ENST00000564834 SPTSSBQ8NFR3 76 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms