RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 SPINK6Q6UWN8 80 aa13.21□□□□□ -0.29
SPSB3-206ENST00000564709 CIRBP-AS1Q8TBR5 109 aa13.21□□□□□ -0.29
SPSB3-206ENST00000564709 SPANXA2-OT1Q8N9U9 137 aa13.19□□□□□ -0.3
SPSB3-206ENST00000564709 PCOTHQ58A44 107 aa13.17□□□□□ -0.3
SPSB3-206ENST00000564709 TP53AIP1Q9HCN2 124 aa13.17□□□□□ -0.3
SPSB3-206ENST00000564709 BRK1Q8WUW1 75 aa13.16□□□□□ -0.3
SPSB3-206ENST00000564709 MRPL34Q9BQ48 92 aaKnown RBP13.14□□□□□ -0.31
SPSB3-206ENST00000564709 Q1T7F1 81 aa13.13□□□□□ -0.31
SPSB3-206ENST00000564709 SEC61GP60059 68 aa13.12□□□□□ -0.31
SPSB3-206ENST00000564709 PSPHP1O15172 72 aa13.1□□□□□ -0.31
SPSB3-206ENST00000564709 CD164Q04900 197 aa13.1□□□□□ -0.31
SPSB3-206ENST00000564709 PKD1P98161 4303 aa13.07□□□□□ -0.32
SPSB3-206ENST00000564709 KRTAP10-1P60331 282 aa13.05□□□□□ -0.32
SPSB3-206ENST00000564709 IGLV7-46A0A075B6I9 117 aa13.05□□□□□ -0.32
SPSB3-206ENST00000564709 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
SPSB3-206ENST00000564709 V9GYY9 64 aa13.04□□□□□ -0.32
SPSB3-206ENST00000564709 SSBP3-AS1Q7Z2R9 100 aa13.01□□□□□ -0.33
SPSB3-206ENST00000564709 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
SPSB3-206ENST00000564709 FAT2Q9NYQ8 4349 aa13.01□□□□□ -0.33
SPSB3-206ENST00000564709 COA5Q86WW8 74 aa13□□□□□ -0.33
SPSB3-206ENST00000564709 KRTAP13-2Q52LG2 175 aa12.98□□□□□ -0.33
SPSB3-206ENST00000564709 A8MUN3 132 aa12.97□□□□□ -0.33
SPSB3-206ENST00000564709 Q6ZSA8 131 aa12.97□□□□□ -0.33
SPSB3-206ENST00000564709 Q5W150 140 aa12.97□□□□□ -0.33
SPSB3-206ENST00000564709 Q8N9P0 234 aaPredicted RBP12.93□□□□□ -0.34
SPSB3-206ENST00000564709 C1orf195Q5TG92 126 aa12.92□□□□□ -0.34
SPSB3-206ENST00000564709 KRTAP13-3Q3SY46 172 aa12.89□□□□□ -0.35
SPSB3-206ENST00000564709 C8orf87E5RJ46 101 aa12.87□□□□□ -0.35
SPSB3-206ENST00000564709 Q5VV11 94 aa12.87□□□□□ -0.35
SPSB3-206ENST00000564709 VPS13BQ7Z7G8 4022 aa12.87□□□□□ -0.35
SPSB3-206ENST00000564709 LOC101927531A0A1B0GV80 90 aa12.85□□□□□ -0.35
SPSB3-206ENST00000564709 KRTAP1-4P0C5Y4 121 aa12.84□□□□□ -0.35
SPSB3-206ENST00000564709 LINC00313P59037 77 aa12.84□□□□□ -0.35
SPSB3-206ENST00000564709 PRR15LQ9BU68 103 aa12.84□□□□□ -0.35
SPSB3-206ENST00000564709 RETNLBQ9BQ08 111 aa12.84□□□□□ -0.35
SPSB3-206ENST00000564709 HRES1P13985 223 aa12.82□□□□□ -0.36
SPSB3-206ENST00000564709 LIMD2Q9BT23 127 aa12.82□□□□□ -0.36
SPSB3-206ENST00000564709 SPAG11AQ6PDA7 123 aa12.76□□□□□ -0.37
SPSB3-206ENST00000564709 CHKB-CPT1BH3BT56 60 aa12.75□□□□□ -0.37
SPSB3-206ENST00000564709 A8MU10 97 aa12.74□□□□□ -0.37
SPSB3-206ENST00000564709 PKHD1P08F94 4074 aa12.74□□□□□ -0.37
SPSB3-206ENST00000564709 PLA2G1BP04054 148 aaKnown RBP12.72□□□□□ -0.37
SPSB3-206ENST00000564709 KRTAP16-1A8MUX0 517 aa12.69□□□□□ -0.38
SPSB3-206ENST00000564709 FAM229AH3BQW9 127 aa12.69□□□□□ -0.38
SPSB3-206ENST00000564709 TYMSOSQ8TAI1 123 aa12.68□□□□□ -0.38
SPSB3-206ENST00000564709 C4orf48Q5BLP8 95 aa12.65□□□□□ -0.39
SPSB3-206ENST00000564709 Q75L30 129 aa12.64□□□□□ -0.39
SPSB3-206ENST00000564709 PRR26Q8N8Z3 221 aa12.63□□□□□ -0.39
SPSB3-206ENST00000564709 LINC01558Q9Y6Z2 57 aa12.62□□□□□ -0.39
SPSB3-206ENST00000564709 SACSQ9NZJ4 4579 aa12.62□□□□□ -0.39
SPSB3-206ENST00000564709 IGKV2-30P06310 120 aa12.61□□□□□ -0.39
SPSB3-206ENST00000564709 A6NED7 52 aa12.59□□□□□ -0.39
SPSB3-206ENST00000564709 ACYP2P14621 99 aa12.57□□□□□ -0.4
SPSB3-206ENST00000564709 PMAIP1Q13794 54 aa12.57□□□□□ -0.4
SPSB3-206ENST00000564709 SMR3BP02814 79 aaPredicted RBP12.56□□□□□ -0.4
SPSB3-206ENST00000564709 SPINK1P00995 79 aa12.55□□□□□ -0.4
SPSB3-206ENST00000564709 DMAC1Q96GE9 116 aa12.55□□□□□ -0.4
SPSB3-206ENST00000564709 IGKV2D-30A0A075B6S6 120 aa12.54□□□□□ -0.4
SPSB3-206ENST00000564709 LCA10Q71F78 164 aa12.53□□□□□ -0.4
SPSB3-206ENST00000564709 DYNC1H1Q14204 4646 aaKnown RBP12.49□□□□□ -0.41
SPSB3-206ENST00000564709 LINC00304Q8N9R0 145 aa12.49□□□□□ -0.41
SPSB3-206ENST00000564709 SPINK7P58062 85 aa12.45□□□□□ -0.42
SPSB3-206ENST00000564709 SPTSSBQ8NFR3 76 aa12.44□□□□□ -0.42
SPSB3-206ENST00000564709 FAT1Q14517 4588 aa12.4□□□□□ -0.43
SPSB3-206ENST00000564709 CDC42SE1Q9NRR8 79 aa12.39□□□□□ -0.43
SPSB3-206ENST00000564709 APOBP04114 4563 aaKnown RBP12.35□□□□□ -0.43
SPSB3-206ENST00000564709 A0A1B0GVY2 172 aa12.35□□□□□ -0.43
SPSB3-206ENST00000564709 C7orf65Q6ZTY9 151 aa12.34□□□□□ -0.43
SPSB3-206ENST00000564709 RPS29P62273 56 aaKnown RBP12.33□□□□□ -0.44
SPSB3-206ENST00000564709 ATP11AUNQ6ZP68 121 aa12.31□□□□□ -0.44
SPSB3-206ENST00000564709 C9orf92A6NGG3 77 aa12.3□□□□□ -0.44
SPSB3-206ENST00000564709 KRTAP10-4P60372 401 aaPredicted RBP12.29□□□□□ -0.44
SPSB3-206ENST00000564709 PKHD1L1Q86WI1 4243 aa12.28□□□□□ -0.44
SPSB3-206ENST00000564709 A0A1B0GU69 56 aa12.25□□□□□ -0.45
SPSB3-206ENST00000564709 Q8N1X5 172 aa12.25□□□□□ -0.45
SPSB3-206ENST00000564709 RYR2Q92736 4967 aa12.18□□□□□ -0.46
SPSB3-206ENST00000564709 A6NN06 94 aa12.17□□□□□ -0.46
SPSB3-206ENST00000564709 A8MUU9 505 aa12.12□□□□□ -0.47
SPSB3-206ENST00000564709 C20orf166-AS1Q96NR2 134 aa12.12□□□□□ -0.47
SPSB3-206ENST00000564709 KMT2CQ8NEZ4 4911 aaKnown RBP12.11□□□□□ -0.47
SPSB3-206ENST00000564709 KTN1-AS1Q86SY8 53 aa12.08□□□□□ -0.48
SPSB3-206ENST00000564709 RBM12B-AS1Q9P1G2 102 aa12.05□□□□□ -0.48
SPSB3-206ENST00000564709 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.48
SPSB3-206ENST00000564709 UQCR11O14957 56 aa11.97□□□□□ -0.49
SPSB3-206ENST00000564709 SPATA8Q6RVD6 105 aa11.97□□□□□ -0.49
SPSB3-206ENST00000564709 MIR22HGQ0VDD5 57 aa11.96□□□□□ -0.49
SPSB3-206ENST00000564709 LRP1Q07954 4544 aaKnown RBP11.96□□□□□ -0.5
SPSB3-206ENST00000564709 KRTAP3-1Q9BYR8 98 aa11.95□□□□□ -0.5
SPSB3-206ENST00000564709 TNXBP22105 4242 aa11.9□□□□□ -0.5
SPSB3-206ENST00000564709 FAT3Q8TDW7 4589 aa11.88□□□□□ -0.51
SPSB3-206ENST00000564709 HSPG2P98160 4391 aa11.85□□□□□ -0.51
SPSB3-206ENST00000564709 Q5VSD8 79 aa11.84□□□□□ -0.51
SPSB3-206ENST00000564709 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
SPSB3-206ENST00000564709 RYR3Q15413 4870 aa11.77□□□□□ -0.53
SPSB3-206ENST00000564709 COX6B2Q6YFQ2 88 aa11.72□□□□□ -0.53
SPSB3-206ENST00000564709 DMBT1Q9UGM3 2413 aaPredicted RBP11.71□□□□□ -0.53
SPSB3-206ENST00000564709 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
SPSB3-206ENST00000564709 ADM2Q7Z4H4 148 aa11.7□□□□□ -0.54
SPSB3-206ENST00000564709 PRAC1Q96KF2 57 aa11.69□□□□□ -0.54
SPSB3-206ENST00000564709 H0YAA0 97 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms