RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 NDUFB1O75438 58 aa4.79□□□□□ -1.64
CLN6-203ENST00000563917 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
CLN6-203ENST00000563917 C9JAW5 83 aa4.78□□□□□ -1.64
CLN6-203ENST00000563917 LYRM7Q5U5X0 104 aa4.78□□□□□ -1.64
CLN6-203ENST00000563917 UQCR10Q9UDW1 63 aa4.78□□□□□ -1.64
CLN6-203ENST00000563917 HRES1P13985 223 aa4.77□□□□□ -1.65
CLN6-203ENST00000563917 MT2AP02795 61 aa4.75□□□□□ -1.65
CLN6-203ENST00000563917 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
CLN6-203ENST00000563917 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
CLN6-203ENST00000563917 PYY3Q5JQD4 70 aa4.75□□□□□ -1.65
CLN6-203ENST00000563917 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
CLN6-203ENST00000563917 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
CLN6-203ENST00000563917 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
CLN6-203ENST00000563917 SPINK7P58062 85 aa4.73□□□□□ -1.65
CLN6-203ENST00000563917 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
CLN6-203ENST00000563917 Q6ZQT0 140 aa4.72□□□□□ -1.65
CLN6-203ENST00000563917 LINC00846Q9NV44 126 aa4.72□□□□□ -1.65
CLN6-203ENST00000563917 A0A1B0GW54 56 aa4.71□□□□□ -1.66
CLN6-203ENST00000563917 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
CLN6-203ENST00000563917 ATXN8Q156A1 80 aa4.71□□□□□ -1.66
CLN6-203ENST00000563917 MT1FP04733 61 aa4.7□□□□□ -1.66
CLN6-203ENST00000563917 PDE6GP18545 87 aa4.7□□□□□ -1.66
CLN6-203ENST00000563917 USH2AO75445 5202 aa4.7□□□□□ -1.66
CLN6-203ENST00000563917 A8MWP4 228 aa4.69□□□□□ -1.66
CLN6-203ENST00000563917 M0R143 59 aa4.68□□□□□ -1.66
CLN6-203ENST00000563917 WFDC13Q8IUB5 93 aa4.68□□□□□ -1.66
CLN6-203ENST00000563917 Q8N9P0 234 aaPredicted RBP4.68□□□□□ -1.66
CLN6-203ENST00000563917 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
CLN6-203ENST00000563917 LOC110117498A0A087WWA1 95 aa4.66□□□□□ -1.66
CLN6-203ENST00000563917 NREPQ16612 68 aa4.66□□□□□ -1.66
CLN6-203ENST00000563917 Q6ZVQ6 151 aa4.66□□□□□ -1.66
CLN6-203ENST00000563917 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
CLN6-203ENST00000563917 LCE2BO14633 110 aa4.65□□□□□ -1.67
CLN6-203ENST00000563917 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
CLN6-203ENST00000563917 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
CLN6-203ENST00000563917 IGKV3D-7A0A0C4DH55 119 aa4.63□□□□□ -1.67
CLN6-203ENST00000563917 NDUFS5O43920 106 aa4.63□□□□□ -1.67
CLN6-203ENST00000563917 PRR15Q8IV56 129 aa4.63□□□□□ -1.67
CLN6-203ENST00000563917 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
CLN6-203ENST00000563917 MRPL34Q9BQ48 92 aaKnown RBP4.62□□□□□ -1.67
CLN6-203ENST00000563917 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
CLN6-203ENST00000563917 TMEM254Q8TBM7 123 aa4.61□□□□□ -1.67
CLN6-203ENST00000563917 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
CLN6-203ENST00000563917 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
CLN6-203ENST00000563917 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
CLN6-203ENST00000563917 hDV103S1A0JD37 113 aa4.59□□□□□ -1.67
CLN6-203ENST00000563917 H1FX-AS1Q4G0G2 97 aa4.58□□□□□ -1.68
CLN6-203ENST00000563917 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
CLN6-203ENST00000563917 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
CLN6-203ENST00000563917 BPY2O14599 106 aa4.56□□□□□ -1.68
CLN6-203ENST00000563917 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
CLN6-203ENST00000563917 TSTD3H0UI37 97 aa4.55□□□□□ -1.68
CLN6-203ENST00000563917 K7EQZ3 153 aa4.55□□□□□ -1.68
CLN6-203ENST00000563917 BATFQ16520 125 aa4.55□□□□□ -1.68
CLN6-203ENST00000563917 C7orf65Q6ZTY9 151 aa4.55□□□□□ -1.68
CLN6-203ENST00000563917 H3BT86 120 aa4.54□□□□□ -1.68
CLN6-203ENST00000563917 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
CLN6-203ENST00000563917 SMIM6P0DI80 62 aa4.52□□□□□ -1.69
CLN6-203ENST00000563917 CASC2Q6XLA1 102 aa4.5□□□□□ -1.69
CLN6-203ENST00000563917 HCG22E2RYF7 251 aa4.49□□□□□ -1.69
CLN6-203ENST00000563917 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
CLN6-203ENST00000563917 CXCL6P80162 114 aa4.48□□□□□ -1.69
CLN6-203ENST00000563917 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
CLN6-203ENST00000563917 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
CLN6-203ENST00000563917 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
CLN6-203ENST00000563917 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
CLN6-203ENST00000563917 Q5W150 140 aa4.47□□□□□ -1.69
CLN6-203ENST00000563917 C4orf26Q17RF5 130 aa4.46□□□□□ -1.7
CLN6-203ENST00000563917 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
CLN6-203ENST00000563917 Q8N9L7 120 aa4.45□□□□□ -1.7
CLN6-203ENST00000563917 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
CLN6-203ENST00000563917 TAX1BP3O14907 124 aa4.43□□□□□ -1.7
CLN6-203ENST00000563917 C5orf47Q569G3 176 aa4.43□□□□□ -1.7
CLN6-203ENST00000563917 SPCS1Q9Y6A9 102 aa4.42□□□□□ -1.7
CLN6-203ENST00000563917 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
CLN6-203ENST00000563917 S4R3F8 94 aa4.41□□□□□ -1.7
CLN6-203ENST00000563917 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.71
CLN6-203ENST00000563917 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
CLN6-203ENST00000563917 A6NN06 94 aa4.37□□□□□ -1.71
CLN6-203ENST00000563917 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
CLN6-203ENST00000563917 Q5VV11 94 aa4.36□□□□□ -1.71
CLN6-203ENST00000563917 SMCPP49901 116 aaPredicted RBP4.33□□□□□ -1.72
CLN6-203ENST00000563917 LCA10Q71F78 164 aa4.33□□□□□ -1.72
CLN6-203ENST00000563917 COL5A1-AS1Q5SY13 56 aa4.32□□□□□ -1.72
CLN6-203ENST00000563917 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
CLN6-203ENST00000563917 K7EP34 96 aa4.3□□□□□ -1.72
CLN6-203ENST00000563917 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
CLN6-203ENST00000563917 GTF2H5Q6ZYL4 71 aa4.29□□□□□ -1.72
CLN6-203ENST00000563917 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
CLN6-203ENST00000563917 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
CLN6-203ENST00000563917 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
CLN6-203ENST00000563917 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
CLN6-203ENST00000563917 MT1BP07438 61 aa4.27□□□□□ -1.73
CLN6-203ENST00000563917 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
CLN6-203ENST00000563917 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
CLN6-203ENST00000563917 TRAV22A0A0B4J277 110 aa4.25□□□□□ -1.73
CLN6-203ENST00000563917 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
CLN6-203ENST00000563917 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
CLN6-203ENST00000563917 F8W1H4 67 aa4.24□□□□□ -1.73
CLN6-203ENST00000563917 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms