RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 C8orf87E5RJ46 101 aa8.91□□□□□ -0.98
NME3-205ENST00000563854 NAA38Q9BRA0 125 aaKnown RBP8.9□□□□□ -0.98
NME3-205ENST00000563854 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.98
NME3-205ENST00000563854 TSTD3H0UI37 97 aa8.87□□□□□ -0.99
NME3-205ENST00000563854 HRES1P13985 223 aa8.87□□□□□ -0.99
NME3-205ENST00000563854 KRTAP9-8Q9BYQ0 159 aa8.87□□□□□ -0.99
NME3-205ENST00000563854 J3KT08 172 aa8.85□□□□□ -0.99
NME3-205ENST00000563854 M0R143 59 aa8.85□□□□□ -0.99
NME3-205ENST00000563854 ATXN8Q156A1 80 aa8.85□□□□□ -0.99
NME3-205ENST00000563854 C21orf62-AS1Q17RA5 79 aa8.84□□□□□ -0.99
NME3-205ENST00000563854 Q6ZQT0 140 aa8.84□□□□□ -0.99
NME3-205ENST00000563854 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
NME3-205ENST00000563854 NDUFB1O75438 58 aa8.81□□□□□ -1
NME3-205ENST00000563854 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
NME3-205ENST00000563854 JMJD7-PLA2G4BH0Y9G9 81 aa8.8□□□□□ -1
NME3-205ENST00000563854 MT2AP02795 61 aa8.77□□□□□ -1.01
NME3-205ENST00000563854 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
NME3-205ENST00000563854 C14orf132Q9NPU4 83 aa8.77□□□□□ -1.01
NME3-205ENST00000563854 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
NME3-205ENST00000563854 A8MWP4 228 aa8.75□□□□□ -1.01
NME3-205ENST00000563854 SPINK7P58062 85 aa8.75□□□□□ -1.01
NME3-205ENST00000563854 MTURNQ8N3F0 131 aa8.75□□□□□ -1.01
NME3-205ENST00000563854 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
NME3-205ENST00000563854 BATFQ16520 125 aa8.73□□□□□ -1.01
NME3-205ENST00000563854 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
NME3-205ENST00000563854 PDE6GP18545 87 aa8.72□□□□□ -1.01
NME3-205ENST00000563854 Q8N9P0 234 aaPredicted RBP8.72□□□□□ -1.01
NME3-205ENST00000563854 USH2AO75445 5202 aa8.71□□□□□ -1.01
NME3-205ENST00000563854 A0A1B0GW54 56 aa8.7□□□□□ -1.02
NME3-205ENST00000563854 MT1FP04733 61 aa8.7□□□□□ -1.02
NME3-205ENST00000563854 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.69□□□□□ -1.02
NME3-205ENST00000563854 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
NME3-205ENST00000563854 NREPQ16612 68 aa8.68□□□□□ -1.02
NME3-205ENST00000563854 Q6ZVQ6 151 aa8.68□□□□□ -1.02
NME3-205ENST00000563854 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
NME3-205ENST00000563854 PCP4L1A6NKN8 68 aa8.66□□□□□ -1.02
NME3-205ENST00000563854 KRTAP9-7A8MTY7 169 aa8.66□□□□□ -1.02
NME3-205ENST00000563854 SSPOA2VEC9 5147 aa8.66□□□□□ -1.02
NME3-205ENST00000563854 PRR15Q8IV56 129 aa8.65□□□□□ -1.02
NME3-205ENST00000563854 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
NME3-205ENST00000563854 MRPL34Q9BQ48 92 aaKnown RBP8.6□□□□□ -1.03
NME3-205ENST00000563854 LCE2BO14633 110 aa8.59□□□□□ -1.03
NME3-205ENST00000563854 NDUFS5O43920 106 aa8.59□□□□□ -1.03
NME3-205ENST00000563854 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
NME3-205ENST00000563854 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
NME3-205ENST00000563854 K7EQZ3 153 aa8.58□□□□□ -1.04
NME3-205ENST00000563854 H3BT86 120 aa8.57□□□□□ -1.04
NME3-205ENST00000563854 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
NME3-205ENST00000563854 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
NME3-205ENST00000563854 A0A1W2PPM0 123 aa8.54□□□□□ -1.04
NME3-205ENST00000563854 TAX1BP3O14907 124 aa8.53□□□□□ -1.04
NME3-205ENST00000563854 FCGBPQ9Y6R7 5405 aaPredicted RBP8.53□□□□□ -1.04
NME3-205ENST00000563854 BPY2O14599 106 aa8.52□□□□□ -1.05
NME3-205ENST00000563854 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
NME3-205ENST00000563854 COL5A1-AS1Q5SY13 56 aa8.51□□□□□ -1.05
NME3-205ENST00000563854 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
NME3-205ENST00000563854 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
NME3-205ENST00000563854 Q8N9L7 120 aa8.46□□□□□ -1.06
NME3-205ENST00000563854 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
NME3-205ENST00000563854 SPCS1Q9Y6A9 102 aa8.44□□□□□ -1.06
NME3-205ENST00000563854 Q5W150 140 aa8.42□□□□□ -1.06
NME3-205ENST00000563854 CASC2Q6XLA1 102 aa8.42□□□□□ -1.06
NME3-205ENST00000563854 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
NME3-205ENST00000563854 HCG22E2RYF7 251 aa8.4□□□□□ -1.06
NME3-205ENST00000563854 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
NME3-205ENST00000563854 LINC00846Q9NV44 126 aa8.33□□□□□ -1.08
NME3-205ENST00000563854 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
NME3-205ENST00000563854 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
NME3-205ENST00000563854 CXCL6P80162 114 aa8.31□□□□□ -1.08
NME3-205ENST00000563854 K7EP34 96 aa8.29□□□□□ -1.08
NME3-205ENST00000563854 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
NME3-205ENST00000563854 PRO0461Q9UI25 63 aa8.27□□□□□ -1.09
NME3-205ENST00000563854 GTF2H5Q6ZYL4 71 aa8.26□□□□□ -1.09
NME3-205ENST00000563854 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
NME3-205ENST00000563854 A0A1B0GV90 55 aa8.22□□□□□ -1.09
NME3-205ENST00000563854 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
NME3-205ENST00000563854 SYNE2Q8WXH0 6885 aaKnown RBP8.19□□□□□ -1.1
NME3-205ENST00000563854 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
NME3-205ENST00000563854 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
NME3-205ENST00000563854 S4R3F8 94 aa8.16□□□□□ -1.1
NME3-205ENST00000563854 C1orf64Q8NEQ6 169 aa8.14□□□□□ -1.11
NME3-205ENST00000563854 F8W1H4 67 aa8.13□□□□□ -1.11
NME3-205ENST00000563854 KRTAP3-1Q9BYR8 98 aa8.13□□□□□ -1.11
NME3-205ENST00000563854 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
NME3-205ENST00000563854 ETDBQ3ZM63 59 aa8.09□□□□□ -1.11
NME3-205ENST00000563854 LCA10Q71F78 164 aa8.08□□□□□ -1.12
NME3-205ENST00000563854 CSAG1Q6PB30 78 aa8.07□□□□□ -1.12
NME3-205ENST00000563854 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
NME3-205ENST00000563854 Q5VV11 94 aa7.97□□□□□ -1.13
NME3-205ENST00000563854 CYP4F30PQ9H0H9 118 aa7.97□□□□□ -1.13
NME3-205ENST00000563854 TRAV22A0A0B4J277 110 aa7.96□□□□□ -1.14
NME3-205ENST00000563854 MT1BP07438 61 aa7.95□□□□□ -1.14
NME3-205ENST00000563854 A6NN06 94 aa7.94□□□□□ -1.14
NME3-205ENST00000563854 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
NME3-205ENST00000563854 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
NME3-205ENST00000563854 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
NME3-205ENST00000563854 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
NME3-205ENST00000563854 A0A087WVE0 104 aa7.9□□□□□ -1.14
NME3-205ENST00000563854 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.14
NME3-205ENST00000563854 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms