RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 A6NDN8 102 aa4.66□□□□□ -1.66
HDGFL3-204ENST00000563790 Q6ZQY7 126 aa4.66□□□□□ -1.66
HDGFL3-204ENST00000563790 NHP2Q9NX24 153 aaKnown RBP4.66□□□□□ -1.66
HDGFL3-204ENST00000563790 F8WEM9 126 aa4.65□□□□□ -1.67
HDGFL3-204ENST00000563790 IFITM1P13164 125 aa4.65□□□□□ -1.67
HDGFL3-204ENST00000563790 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
HDGFL3-204ENST00000563790 MUSTN1Q8IVN3 82 aa4.65□□□□□ -1.67
HDGFL3-204ENST00000563790 LST1O00453 97 aa4.64□□□□□ -1.67
HDGFL3-204ENST00000563790 TRAV13-2A0A0B4J235 113 aa4.63□□□□□ -1.67
HDGFL3-204ENST00000563790 H3BUT2 72 aa4.62□□□□□ -1.67
HDGFL3-204ENST00000563790 COA6Q5JTJ3 125 aaKnown RBP4.62□□□□□ -1.67
HDGFL3-204ENST00000563790 MTURNQ8N3F0 131 aa4.62□□□□□ -1.67
HDGFL3-204ENST00000563790 hADV29S1A0JD25 119 aa4.61□□□□□ -1.67
HDGFL3-204ENST00000563790 C3orf79P0CE67 100 aa4.61□□□□□ -1.67
HDGFL3-204ENST00000563790 DSCR10P59022 87 aa4.61□□□□□ -1.67
HDGFL3-204ENST00000563790 KRTDAPP60985 99 aa4.61□□□□□ -1.67
HDGFL3-204ENST00000563790 SNRPEP62304 92 aaKnown RBP4.6□□□□□ -1.67
HDGFL3-204ENST00000563790 SCGB1D4Q6XE38 83 aa4.6□□□□□ -1.67
HDGFL3-204ENST00000563790 S100A1P23297 94 aa4.59□□□□□ -1.67
HDGFL3-204ENST00000563790 COPS9Q8WXC6 57 aa4.59□□□□□ -1.67
HDGFL3-204ENST00000563790 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.58□□□□□ -1.68
HDGFL3-204ENST00000563790 PPDPFLQ8WWR9 84 aa4.58□□□□□ -1.68
HDGFL3-204ENST00000563790 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
HDGFL3-204ENST00000563790 UBE2V1Q13404 147 aa4.57□□□□□ -1.68
HDGFL3-204ENST00000563790 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
HDGFL3-204ENST00000563790 A0A087WSZ3 146 aa4.56□□□□□ -1.68
HDGFL3-204ENST00000563790 S100A2P29034 98 aa4.56□□□□□ -1.68
HDGFL3-204ENST00000563790 TEN1Q86WV5 123 aa4.56□□□□□ -1.68
HDGFL3-204ENST00000563790 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
HDGFL3-204ENST00000563790 S100A6P06703 90 aa4.55□□□□□ -1.68
HDGFL3-204ENST00000563790 VAMP3Q15836 100 aa4.55□□□□□ -1.68
HDGFL3-204ENST00000563790 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
HDGFL3-204ENST00000563790 ATOH7Q8N100 152 aa4.53□□□□□ -1.68
HDGFL3-204ENST00000563790 A0A1W2PNM2 257 aa4.52□□□□□ -1.69
HDGFL3-204ENST00000563790 LINC00313P59037 77 aa4.52□□□□□ -1.69
HDGFL3-204ENST00000563790 HIST3H2BBQ8N257 126 aa4.52□□□□□ -1.69
HDGFL3-204ENST00000563790 SNHG12Q9BXW3 62 aa4.52□□□□□ -1.69
HDGFL3-204ENST00000563790 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
HDGFL3-204ENST00000563790 HIST1H2BLQ99880 126 aa4.51□□□□□ -1.69
HDGFL3-204ENST00000563790 NDUFV3P56181 108 aaKnown RBP4.5□□□□□ -1.69
HDGFL3-204ENST00000563790 FAM218AQ96MZ4 157 aa4.5□□□□□ -1.69
HDGFL3-204ENST00000563790 RBM3P98179 157 aaKnown RBP4.49□□□□□ -1.69
HDGFL3-204ENST00000563790 SIGMAR1Q99720 223 aa4.49□□□□□ -1.69
HDGFL3-204ENST00000563790 BVES-AS1Q5T3Y7 98 aa4.48□□□□□ -1.69
HDGFL3-204ENST00000563790 LINC00472Q9H8W2 130 aa4.48□□□□□ -1.69
HDGFL3-204ENST00000563790 IGKV4-1P06312 121 aa4.46□□□□□ -1.7
HDGFL3-204ENST00000563790 SPINK7P58062 85 aa4.46□□□□□ -1.7
HDGFL3-204ENST00000563790 C12orf57Q99622 126 aa4.46□□□□□ -1.7
HDGFL3-204ENST00000563790 H3BMG7 143 aa4.45□□□□□ -1.7
HDGFL3-204ENST00000563790 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
HDGFL3-204ENST00000563790 DEFB116Q30KQ4 102 aa4.44□□□□□ -1.7
HDGFL3-204ENST00000563790 PAM16Q9Y3D7 125 aa4.44□□□□□ -1.7
HDGFL3-204ENST00000563790 HIST1H4GQ99525 98 aa4.43□□□□□ -1.7
HDGFL3-204ENST00000563790 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
HDGFL3-204ENST00000563790 TRBV7-4A0A0J9YYF1 115 aa4.42□□□□□ -1.7
HDGFL3-204ENST00000563790 DLEU1O43261 78 aa4.42□□□□□ -1.7
HDGFL3-204ENST00000563790 COX8AP10176 69 aa4.42□□□□□ -1.7
HDGFL3-204ENST00000563790 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
HDGFL3-204ENST00000563790 SNCGO76070 127 aa4.4□□□□□ -1.71
HDGFL3-204ENST00000563790 WFDC13Q8IUB5 93 aa4.4□□□□□ -1.71
HDGFL3-204ENST00000563790 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
HDGFL3-204ENST00000563790 SPATA45Q537H7 98 aa4.39□□□□□ -1.71
HDGFL3-204ENST00000563790 RAB37Q96AX2 223 aa4.39□□□□□ -1.71
HDGFL3-204ENST00000563790 C14orf144Q96I85 54 aa4.39□□□□□ -1.71
HDGFL3-204ENST00000563790 VAMP8Q9BV40 100 aa4.39□□□□□ -1.71
HDGFL3-204ENST00000563790 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
HDGFL3-204ENST00000563790 H0YGX0 51 aa4.38□□□□□ -1.71
HDGFL3-204ENST00000563790 HIGD1BQ9P298 99 aa4.38□□□□□ -1.71
HDGFL3-204ENST00000563790 A0A1B0GX51 115 aa4.37□□□□□ -1.71
HDGFL3-204ENST00000563790 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
HDGFL3-204ENST00000563790 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
HDGFL3-204ENST00000563790 FABP2P12104 132 aa4.36□□□□□ -1.71
HDGFL3-204ENST00000563790 A0A0B4J2C4 111 aa4.35□□□□□ -1.71
HDGFL3-204ENST00000563790 MT1XP80297 61 aa4.35□□□□□ -1.71
HDGFL3-204ENST00000563790 ANKRD29Q8N6D5 301 aa4.35□□□□□ -1.71
HDGFL3-204ENST00000563790 CEND1Q8N111 149 aa4.34□□□□□ -1.71
HDGFL3-204ENST00000563790 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
HDGFL3-204ENST00000563790 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
HDGFL3-204ENST00000563790 A0A1B0GV72 72 aa4.33□□□□□ -1.72
HDGFL3-204ENST00000563790 CCKP06307 115 aa4.33□□□□□ -1.72
HDGFL3-204ENST00000563790 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
HDGFL3-204ENST00000563790 C2orf91Q6ZV80 131 aa4.32□□□□□ -1.72
HDGFL3-204ENST00000563790 PRO1854Q9UHT4 67 aa4.32□□□□□ -1.72
HDGFL3-204ENST00000563790 TRACP01848 142 aa4.3□□□□□ -1.72
HDGFL3-204ENST00000563790 PCP4L1A6NKN8 68 aa4.29□□□□□ -1.72
HDGFL3-204ENST00000563790 HSD52Q0P140 79 aa4.29□□□□□ -1.72
HDGFL3-204ENST00000563790 PYY3Q5JQD4 70 aa4.29□□□□□ -1.72
HDGFL3-204ENST00000563790 H3BQ85 93 aa4.28□□□□□ -1.72
HDGFL3-204ENST00000563790 COX6CP09669 75 aa4.28□□□□□ -1.72
HDGFL3-204ENST00000563790 FXYD2P54710 66 aa4.28□□□□□ -1.72
HDGFL3-204ENST00000563790 DNAL4O96015 105 aa4.27□□□□□ -1.73
HDGFL3-204ENST00000563790 PSMB2P49721 201 aa4.27□□□□□ -1.73
HDGFL3-204ENST00000563790 ORMDL1Q9P0S3 153 aa4.27□□□□□ -1.73
HDGFL3-204ENST00000563790 UQCR10Q9UDW1 63 aa4.27□□□□□ -1.73
HDGFL3-204ENST00000563790 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
HDGFL3-204ENST00000563790 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
HDGFL3-204ENST00000563790 J3KT08 172 aa4.25□□□□□ -1.73
HDGFL3-204ENST00000563790 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
HDGFL3-204ENST00000563790 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
HDGFL3-204ENST00000563790 SEC61GP60059 68 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms