RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 NBEAQ8NFP9 2946 aa3.15□□□□□ -1.9
TCF4-218ENST00000563686 UBR5O95071 2799 aaPredicted RBP3.15□□□□□ -1.9
TCF4-218ENST00000563686 ITPR1Q14643 2758 aa3.15□□□□□ -1.9
TCF4-218ENST00000563686 GCN1Q92616 2671 aaKnown RBP3.15□□□□□ -1.91
TCF4-218ENST00000563686 FBN2P35556 2912 aa3.15□□□□□ -1.91
TCF4-218ENST00000563686 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
TCF4-218ENST00000563686 PRRC2CQ9Y520 2896 aaKnown RBP3.15□□□□□ -1.91
TCF4-218ENST00000563686 DCHS2Q6V1P9 2916 aa3.15□□□□□ -1.91
TCF4-218ENST00000563686 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
TCF4-218ENST00000563686 MTORP42345 2549 aa3.14□□□□□ -1.91
TCF4-218ENST00000563686 A8MUU9 505 aa3.14□□□□□ -1.91
TCF4-218ENST00000563686 HELZ2Q9BYK8 2649 aaKnown RBP3.14□□□□□ -1.91
TCF4-218ENST00000563686 ITPR3Q14573 2671 aa3.13□□□□□ -1.91
TCF4-218ENST00000563686 CELSR1Q9NYQ6 3014 aa3.12□□□□□ -1.91
TCF4-218ENST00000563686 RPL37P61927 97 aaKnown RBP3.12□□□□□ -1.91
TCF4-218ENST00000563686 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
TCF4-218ENST00000563686 DNAH10Q8IVF4 4471 aa3.12□□□□□ -1.91
TCF4-218ENST00000563686 MYO9AB2RTY4 2548 aa3.12□□□□□ -1.91
TCF4-218ENST00000563686 ADM2Q7Z4H4 148 aa3.11□□□□□ -1.91
TCF4-218ENST00000563686 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
TCF4-218ENST00000563686 POLQO75417 2590 aa3.1□□□□□ -1.91
TCF4-218ENST00000563686 UTP20O75691 2785 aaKnown RBP3.1□□□□□ -1.91
TCF4-218ENST00000563686 USP9YO00507 2555 aaPredicted RBP3.09□□□□□ -1.91
TCF4-218ENST00000563686 TENM4Q6N022 2769 aa3.09□□□□□ -1.91
TCF4-218ENST00000563686 ZNF469Q96JG9 3925 aaPredicted RBP3.09□□□□□ -1.91
TCF4-218ENST00000563686 DNAH9Q9NYC9 4486 aa3.08□□□□□ -1.92
TCF4-218ENST00000563686 FLNAP21333 2647 aaKnown RBP3.08□□□□□ -1.92
TCF4-218ENST00000563686 CHD6Q8TD26 2715 aa3.08□□□□□ -1.92
TCF4-218ENST00000563686 FN1P02751 2386 aaKnown RBP3.08□□□□□ -1.92
TCF4-218ENST00000563686 CFAP46Q8IYW2 2715 aa3.07□□□□□ -1.92
TCF4-218ENST00000563686 PDZD2O15018 2839 aa3.07□□□□□ -1.92
TCF4-218ENST00000563686 CSMD2Q7Z408 3487 aa3.07□□□□□ -1.92
TCF4-218ENST00000563686 USP9XQ93008 2570 aaPredicted RBP3.06□□□□□ -1.92
TCF4-218ENST00000563686 TACC2O95359 2948 aa3.06□□□□□ -1.92
TCF4-218ENST00000563686 DNAH8Q96JB1 4490 aa3.06□□□□□ -1.92
TCF4-218ENST00000563686 DNAH7Q8WXX0 4024 aa3.06□□□□□ -1.92
TCF4-218ENST00000563686 A0A1B0GVY2 172 aa3.05□□□□□ -1.92
TCF4-218ENST00000563686 TEX15Q9BXT5 2789 aa3.04□□□□□ -1.92
TCF4-218ENST00000563686 TLN2Q9Y4G6 2542 aa3.04□□□□□ -1.92
TCF4-218ENST00000563686 H0YAA0 97 aa3.04□□□□□ -1.92
TCF4-218ENST00000563686 COL12A1Q99715 3063 aa3.03□□□□□ -1.92
TCF4-218ENST00000563686 VPS13DQ5THJ4 4388 aa3.03□□□□□ -1.92
TCF4-218ENST00000563686 M0QZ58 72 aa3.02□□□□□ -1.93
TCF4-218ENST00000563686 HECTD4Q9Y4D8 3996 aa3.02□□□□□ -1.93
TCF4-218ENST00000563686 DNAH17Q9UFH2 4485 aa3.01□□□□□ -1.93
TCF4-218ENST00000563686 XP32Q5T750 250 aa3.01□□□□□ -1.93
TCF4-218ENST00000563686 UNC79Q9P2D8 2635 aa3.01□□□□□ -1.93
TCF4-218ENST00000563686 R4GN34 69 aa3.01□□□□□ -1.93
TCF4-218ENST00000563686 ACANP16112 2415 aa3□□□□□ -1.93
TCF4-218ENST00000563686 APCP25054 2843 aa3□□□□□ -1.93
TCF4-218ENST00000563686 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
TCF4-218ENST00000563686 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
TCF4-218ENST00000563686 ASH1LQ9NR48 2969 aaKnown RBP2.99□□□□□ -1.93
TCF4-218ENST00000563686 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
TCF4-218ENST00000563686 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
TCF4-218ENST00000563686 CELSR2Q9HCU4 2923 aa2.97□□□□□ -1.93
TCF4-218ENST00000563686 CRYBG3Q68DQ2 2970 aa2.97□□□□□ -1.93
TCF4-218ENST00000563686 PKHD1L1Q86WI1 4243 aa2.96□□□□□ -1.94
TCF4-218ENST00000563686 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
TCF4-218ENST00000563686 FLNCQ14315 2725 aa2.95□□□□□ -1.94
TCF4-218ENST00000563686 MAP1AP78559 2803 aaPredicted RBP2.95□□□□□ -1.94
TCF4-218ENST00000563686 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
TCF4-218ENST00000563686 OTOGQ6ZRI0 2925 aa2.93□□□□□ -1.94
TCF4-218ENST00000563686 HIVEP1P15822 2718 aa2.93□□□□□ -1.94
TCF4-218ENST00000563686 PLECQ15149 4684 aaKnown RBP2.93□□□□□ -1.94
TCF4-218ENST00000563686 FRAS1Q86XX4 4008 aa2.93□□□□□ -1.94
TCF4-218ENST00000563686 KRTAP3-1Q9BYR8 98 aa2.92□□□□□ -1.94
TCF4-218ENST00000563686 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
TCF4-218ENST00000563686 TPRXLQ17RH7 258 aa2.92□□□□□ -1.94
TCF4-218ENST00000563686 TEP1Q99973 2627 aaKnown RBP2.91□□□□□ -1.94
TCF4-218ENST00000563686 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.94
TCF4-218ENST00000563686 MGAM2Q2M2H8 2515 aa2.9□□□□□ -1.95
TCF4-218ENST00000563686 LYSTQ99698 3801 aa2.89□□□□□ -1.95
TCF4-218ENST00000563686 CENPEQ02224 2701 aa2.89□□□□□ -1.95
TCF4-218ENST00000563686 ITPR2Q14571 2701 aa2.87□□□□□ -1.95
TCF4-218ENST00000563686 MAST4O15021 2626 aa2.87□□□□□ -1.95
TCF4-218ENST00000563686 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
TCF4-218ENST00000563686 SETD2Q9BYW2 2564 aaPredicted RBP2.87□□□□□ -1.95
TCF4-218ENST00000563686 MXRA5Q9NR99 2828 aa2.87□□□□□ -1.95
TCF4-218ENST00000563686 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
TCF4-218ENST00000563686 P0C880 135 aa2.86□□□□□ -1.95
TCF4-218ENST00000563686 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
TCF4-218ENST00000563686 STARD9Q9P2P6 4700 aa2.85□□□□□ -1.95
TCF4-218ENST00000563686 FBN1P35555 2871 aaKnown RBP2.85□□□□□ -1.95
TCF4-218ENST00000563686 DNAH5Q8TE73 4624 aa2.84□□□□□ -1.95
TCF4-218ENST00000563686 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
TCF4-218ENST00000563686 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.96
TCF4-218ENST00000563686 ZANQ9Y493 2812 aa2.83□□□□□ -1.96
TCF4-218ENST00000563686 NIPBLQ6KC79 2804 aaeCLIP2.82□□□□□ -1.96
TCF4-218ENST00000563686 ATRQ13535 2644 aa2.81□□□□□ -1.96
TCF4-218ENST00000563686 FAT2Q9NYQ8 4349 aa2.81□□□□□ -1.96
TCF4-218ENST00000563686 KMT2AQ03164 3969 aa2.81□□□□□ -1.96
TCF4-218ENST00000563686 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
TCF4-218ENST00000563686 NSD1Q96L73 2696 aaPredicted RBP2.8□□□□□ -1.96
TCF4-218ENST00000563686 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
TCF4-218ENST00000563686 KRTAP13-4Q3LI77 160 aa2.8□□□□□ -1.96
TCF4-218ENST00000563686 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
TCF4-218ENST00000563686 KRTAP3-3Q9BYR6 98 aa2.78□□□□□ -1.96
TCF4-218ENST00000563686 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
TCF4-218ENST00000563686 TNP1P09430 55 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms