RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
HDGFL3-203ENST00000563404 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
HDGFL3-203ENST00000563404 A0A1B0GW54 56 aa8.66□□□□□ -1.02
HDGFL3-203ENST00000563404 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
HDGFL3-203ENST00000563404 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
HDGFL3-203ENST00000563404 MTURNQ8N3F0 131 aa8.64□□□□□ -1.03
HDGFL3-203ENST00000563404 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
HDGFL3-203ENST00000563404 CCKP06307 115 aa8.62□□□□□ -1.03
HDGFL3-203ENST00000563404 Q6ZQT0 140 aa8.62□□□□□ -1.03
HDGFL3-203ENST00000563404 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
HDGFL3-203ENST00000563404 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
HDGFL3-203ENST00000563404 A0A1B0GV72 72 aa8.6□□□□□ -1.03
HDGFL3-203ENST00000563404 A0A1B0GV90 55 aa8.6□□□□□ -1.03
HDGFL3-203ENST00000563404 Q96NJ1 140 aa8.6□□□□□ -1.03
HDGFL3-203ENST00000563404 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
HDGFL3-203ENST00000563404 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
HDGFL3-203ENST00000563404 C20orf166-AS1Q96NR2 134 aa8.57□□□□□ -1.04
HDGFL3-203ENST00000563404 A0A087WSZ3 146 aa8.56□□□□□ -1.04
HDGFL3-203ENST00000563404 A8MUU9 505 aa8.55□□□□□ -1.04
HDGFL3-203ENST00000563404 FCGBPQ9Y6R7 5405 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-203ENST00000563404 ETDBQ3ZM63 59 aa8.53□□□□□ -1.04
HDGFL3-203ENST00000563404 VPS25Q9BRG1 176 aa8.53□□□□□ -1.04
HDGFL3-203ENST00000563404 LINC00472Q9H8W2 130 aa8.48□□□□□ -1.05
HDGFL3-203ENST00000563404 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
HDGFL3-203ENST00000563404 MT2AP02795 61 aa8.47□□□□□ -1.05
HDGFL3-203ENST00000563404 DSCR10P59022 87 aa8.46□□□□□ -1.06
HDGFL3-203ENST00000563404 J3KT08 172 aa8.44□□□□□ -1.06
HDGFL3-203ENST00000563404 NREPQ16612 68 aa8.43□□□□□ -1.06
HDGFL3-203ENST00000563404 LCE2BO14633 110 aa8.42□□□□□ -1.06
HDGFL3-203ENST00000563404 MT1FP04733 61 aa8.41□□□□□ -1.06
HDGFL3-203ENST00000563404 ACYP1P07311 99 aa8.4□□□□□ -1.06
HDGFL3-203ENST00000563404 IGKV4-1P06312 121 aa8.39□□□□□ -1.07
HDGFL3-203ENST00000563404 FAM240AA0A1B0GVK7 77 aa8.38□□□□□ -1.07
HDGFL3-203ENST00000563404 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
HDGFL3-203ENST00000563404 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
HDGFL3-203ENST00000563404 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
HDGFL3-203ENST00000563404 HRES1P13985 223 aa8.36□□□□□ -1.07
HDGFL3-203ENST00000563404 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
HDGFL3-203ENST00000563404 UBL5Q9BZL1 73 aa8.36□□□□□ -1.07
HDGFL3-203ENST00000563404 LINC00846Q9NV44 126 aa8.36□□□□□ -1.07
HDGFL3-203ENST00000563404 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
HDGFL3-203ENST00000563404 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
HDGFL3-203ENST00000563404 Q6ZVQ6 151 aa8.35□□□□□ -1.07
HDGFL3-203ENST00000563404 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
HDGFL3-203ENST00000563404 LINC00313P59037 77 aa8.34□□□□□ -1.07
HDGFL3-203ENST00000563404 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
HDGFL3-203ENST00000563404 NDUFB1O75438 58 aa8.33□□□□□ -1.08
HDGFL3-203ENST00000563404 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-203ENST00000563404 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
HDGFL3-203ENST00000563404 A8MWP4 228 aa8.31□□□□□ -1.08
HDGFL3-203ENST00000563404 J3QR89 54 aa8.31□□□□□ -1.08
HDGFL3-203ENST00000563404 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
HDGFL3-203ENST00000563404 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
HDGFL3-203ENST00000563404 BPY2O14599 106 aa8.3□□□□□ -1.08
HDGFL3-203ENST00000563404 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
HDGFL3-203ENST00000563404 RBM12B-AS1Q9P1G2 102 aa8.28□□□□□ -1.08
HDGFL3-203ENST00000563404 PRR15Q8IV56 129 aa8.27□□□□□ -1.09
HDGFL3-203ENST00000563404 IGKV3D-7A0A0C4DH55 119 aa8.26□□□□□ -1.09
HDGFL3-203ENST00000563404 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
HDGFL3-203ENST00000563404 CXCL6P80162 114 aa8.25□□□□□ -1.09
HDGFL3-203ENST00000563404 ATP5EP2Q5VTU8 51 aa8.2□□□□□ -1.1
HDGFL3-203ENST00000563404 C8orf17Q9NRJ1 99 aa8.2□□□□□ -1.1
HDGFL3-203ENST00000563404 K7ERU9 68 aa8.19□□□□□ -1.1
HDGFL3-203ENST00000563404 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
HDGFL3-203ENST00000563404 K7EQZ3 153 aa8.18□□□□□ -1.1
HDGFL3-203ENST00000563404 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
HDGFL3-203ENST00000563404 KRTAP19-6Q3LI70 58 aa8.13□□□□□ -1.11
HDGFL3-203ENST00000563404 Q8N9P0 234 aaPredicted RBP8.13□□□□□ -1.11
HDGFL3-203ENST00000563404 TMEM254Q8TBM7 123 aa8.13□□□□□ -1.11
HDGFL3-203ENST00000563404 hDV103S1A0JD37 113 aa8.12□□□□□ -1.11
HDGFL3-203ENST00000563404 Q8N9L7 120 aa8.12□□□□□ -1.11
HDGFL3-203ENST00000563404 ZCCHC13Q8WW36 166 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-203ENST00000563404 SPINK7P58062 85 aa8.11□□□□□ -1.11
HDGFL3-203ENST00000563404 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-203ENST00000563404 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
HDGFL3-203ENST00000563404 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
HDGFL3-203ENST00000563404 WFDC13Q8IUB5 93 aa8.02□□□□□ -1.13
HDGFL3-203ENST00000563404 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
HDGFL3-203ENST00000563404 IMUPQ9GZP8 106 aa8□□□□□ -1.13
HDGFL3-203ENST00000563404 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
HDGFL3-203ENST00000563404 NDUFS5O43920 106 aa7.95□□□□□ -1.14
HDGFL3-203ENST00000563404 KRTAP6-3Q3LI67 103 aa7.93□□□□□ -1.14
HDGFL3-203ENST00000563404 A0A087WVE0 104 aa7.91□□□□□ -1.14
HDGFL3-203ENST00000563404 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
HDGFL3-203ENST00000563404 Q5W150 140 aa7.87□□□□□ -1.15
HDGFL3-203ENST00000563404 NEBP20929 6669 aa7.84□□□□□ -1.15
HDGFL3-203ENST00000563404 UQCRQO14949 82 aa7.84□□□□□ -1.15
HDGFL3-203ENST00000563404 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
HDGFL3-203ENST00000563404 OCR1Q9BZK8 76 aa7.8□□□□□ -1.16
HDGFL3-203ENST00000563404 SCGB1A1P11684 91 aa7.79□□□□□ -1.16
HDGFL3-203ENST00000563404 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
HDGFL3-203ENST00000563404 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
HDGFL3-203ENST00000563404 MUC12Q9UKN1 5478 aa7.77□□□□□ -1.17
HDGFL3-203ENST00000563404 ATOX1O00244 68 aa7.76□□□□□ -1.17
HDGFL3-203ENST00000563404 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
HDGFL3-203ENST00000563404 IGKV2-30P06310 120 aa7.74□□□□□ -1.17
HDGFL3-203ENST00000563404 C5orf47Q569G3 176 aa7.74□□□□□ -1.17
HDGFL3-203ENST00000563404 FAM236AA0A1B0GUQ0 79 aa7.73□□□□□ -1.17
HDGFL3-203ENST00000563404 FAM236BA0A1B0GV22 79 aa7.73□□□□□ -1.17
HDGFL3-203ENST00000563404 IGKV2D-30A0A075B6S6 120 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms