RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 A0A0U1RQV1 116 aa4.53□□□□□ -1.68
UBR1-204ENST00000563239 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
UBR1-204ENST00000563239 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
UBR1-204ENST00000563239 MTURNQ8N3F0 131 aa4.53□□□□□ -1.68
UBR1-204ENST00000563239 C14orf132Q9NPU4 83 aa4.53□□□□□ -1.68
UBR1-204ENST00000563239 DSCR10P59022 87 aa4.52□□□□□ -1.69
UBR1-204ENST00000563239 Q75L30 129 aa4.52□□□□□ -1.69
UBR1-204ENST00000563239 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
UBR1-204ENST00000563239 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
UBR1-204ENST00000563239 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
UBR1-204ENST00000563239 A8MUU9 505 aa4.51□□□□□ -1.69
UBR1-204ENST00000563239 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
UBR1-204ENST00000563239 H3BT86 120 aa4.51□□□□□ -1.69
UBR1-204ENST00000563239 COL5A1-AS1Q5SY13 56 aa4.51□□□□□ -1.69
UBR1-204ENST00000563239 PDE6GP18545 87 aa4.5□□□□□ -1.69
UBR1-204ENST00000563239 SPCS1Q9Y6A9 102 aa4.5□□□□□ -1.69
UBR1-204ENST00000563239 A0A1B0GW54 56 aa4.49□□□□□ -1.69
UBR1-204ENST00000563239 PCP4L1A6NKN8 68 aa4.49□□□□□ -1.69
UBR1-204ENST00000563239 LINC00313P59037 77 aa4.48□□□□□ -1.69
UBR1-204ENST00000563239 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
UBR1-204ENST00000563239 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
UBR1-204ENST00000563239 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
UBR1-204ENST00000563239 K7EP34 96 aa4.46□□□□□ -1.7
UBR1-204ENST00000563239 ATP11AUNQ6ZP68 121 aa4.46□□□□□ -1.7
UBR1-204ENST00000563239 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
UBR1-204ENST00000563239 J3KT08 172 aa4.45□□□□□ -1.7
UBR1-204ENST00000563239 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
UBR1-204ENST00000563239 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
UBR1-204ENST00000563239 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
UBR1-204ENST00000563239 A8MWP4 228 aa4.43□□□□□ -1.7
UBR1-204ENST00000563239 MT1HP80294 61 aa4.42□□□□□ -1.7
UBR1-204ENST00000563239 NREPQ16612 68 aa4.42□□□□□ -1.7
UBR1-204ENST00000563239 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
UBR1-204ENST00000563239 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
UBR1-204ENST00000563239 C8orf17Q9NRJ1 99 aa4.4□□□□□ -1.71
UBR1-204ENST00000563239 NDUFB1O75438 58 aa4.39□□□□□ -1.71
UBR1-204ENST00000563239 GTF2H5Q6ZYL4 71 aa4.39□□□□□ -1.71
UBR1-204ENST00000563239 Q8N9P0 234 aaPredicted RBP4.39□□□□□ -1.71
UBR1-204ENST00000563239 Q6ZVQ6 151 aa4.38□□□□□ -1.71
UBR1-204ENST00000563239 MMP24-AS1A0A0U1RRL7 71 aa4.37□□□□□ -1.71
UBR1-204ENST00000563239 F8W1H4 67 aa4.37□□□□□ -1.71
UBR1-204ENST00000563239 K7EQZ3 153 aa4.37□□□□□ -1.71
UBR1-204ENST00000563239 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
UBR1-204ENST00000563239 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
UBR1-204ENST00000563239 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
UBR1-204ENST00000563239 BPY2O14599 106 aa4.35□□□□□ -1.71
UBR1-204ENST00000563239 ETDBQ3ZM63 59 aa4.35□□□□□ -1.71
UBR1-204ENST00000563239 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
UBR1-204ENST00000563239 HRES1P13985 223 aa4.34□□□□□ -1.71
UBR1-204ENST00000563239 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
UBR1-204ENST00000563239 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
UBR1-204ENST00000563239 Q8N9L7 120 aa4.33□□□□□ -1.72
UBR1-204ENST00000563239 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
UBR1-204ENST00000563239 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
UBR1-204ENST00000563239 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
UBR1-204ENST00000563239 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
UBR1-204ENST00000563239 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
UBR1-204ENST00000563239 SPINK7P58062 85 aa4.3□□□□□ -1.72
UBR1-204ENST00000563239 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
UBR1-204ENST00000563239 KRTAP3-1Q9BYR8 98 aa4.29□□□□□ -1.72
UBR1-204ENST00000563239 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
UBR1-204ENST00000563239 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
UBR1-204ENST00000563239 A0A1B0GV90 55 aa4.27□□□□□ -1.73
UBR1-204ENST00000563239 M0R2T5 61 aa4.27□□□□□ -1.73
UBR1-204ENST00000563239 Q5W150 140 aa4.27□□□□□ -1.73
UBR1-204ENST00000563239 CASC2Q6XLA1 102 aa4.27□□□□□ -1.73
UBR1-204ENST00000563239 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
UBR1-204ENST00000563239 NDUFS5O43920 106 aa4.25□□□□□ -1.73
UBR1-204ENST00000563239 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
UBR1-204ENST00000563239 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
UBR1-204ENST00000563239 CXCL6P80162 114 aa4.24□□□□□ -1.73
UBR1-204ENST00000563239 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
UBR1-204ENST00000563239 FAM236DA0A1B0GTK5 79 aa4.23□□□□□ -1.73
UBR1-204ENST00000563239 FAM236CP0DP71 79 aa4.23□□□□□ -1.73
UBR1-204ENST00000563239 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
UBR1-204ENST00000563239 ACYP1P07311 99 aa4.22□□□□□ -1.73
UBR1-204ENST00000563239 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
UBR1-204ENST00000563239 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
UBR1-204ENST00000563239 NEBP20929 6669 aa4.21□□□□□ -1.74
UBR1-204ENST00000563239 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
UBR1-204ENST00000563239 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
UBR1-204ENST00000563239 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
UBR1-204ENST00000563239 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
UBR1-204ENST00000563239 MT2AP02795 61 aa4.15□□□□□ -1.75
UBR1-204ENST00000563239 ATP5EP2Q5VTU8 51 aa4.15□□□□□ -1.75
UBR1-204ENST00000563239 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
UBR1-204ENST00000563239 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
UBR1-204ENST00000563239 MT1FP04733 61 aa4.13□□□□□ -1.75
UBR1-204ENST00000563239 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
UBR1-204ENST00000563239 C4orf26Q17RF5 130 aa4.12□□□□□ -1.75
UBR1-204ENST00000563239 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
UBR1-204ENST00000563239 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
UBR1-204ENST00000563239 A0A087WVE0 104 aa4.11□□□□□ -1.75
UBR1-204ENST00000563239 HIST1H4AP62805 103 aaKnown RBP4.11□□□□□ -1.75
UBR1-204ENST00000563239 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
UBR1-204ENST00000563239 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
UBR1-204ENST00000563239 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
UBR1-204ENST00000563239 USH2AO75445 5202 aa4.07□□□□□ -1.76
UBR1-204ENST00000563239 TRAV22A0A0B4J277 110 aa4.07□□□□□ -1.76
UBR1-204ENST00000563239 PCP4P48539 62 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms