RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 BSNQ9UPA5 3926 aa2.49□□□□□ -2.01
TCF4-215ENST00000562638 KRTAP10-11P60412 298 aa2.48□□□□□ -2.01
TCF4-215ENST00000562638 TEX15Q9BXT5 2789 aa2.48□□□□□ -2.01
TCF4-215ENST00000562638 NBASA2RRP1 2371 aa2.47□□□□□ -2.01
TCF4-215ENST00000562638 MYO15AQ9UKN7 3530 aa2.47□□□□□ -2.01
TCF4-215ENST00000562638 MEGF8Q7Z7M0 2845 aa2.46□□□□□ -2.01
TCF4-215ENST00000562638 ADGRG4Q8IZF6 3080 aa2.46□□□□□ -2.02
TCF4-215ENST00000562638 HIVEP2P31629 2446 aa2.46□□□□□ -2.02
TCF4-215ENST00000562638 TRRAPQ9Y4A5 3859 aa2.46□□□□□ -2.02
TCF4-215ENST00000562638 SPTAN1Q13813 2472 aaKnown RBP2.45□□□□□ -2.02
TCF4-215ENST00000562638 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
TCF4-215ENST00000562638 RELNP78509 3460 aa2.44□□□□□ -2.02
TCF4-215ENST00000562638 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
TCF4-215ENST00000562638 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
TCF4-215ENST00000562638 HIVEP3Q5T1R4 2406 aa2.44□□□□□ -2.02
TCF4-215ENST00000562638 TLN1Q9Y490 2541 aaKnown RBP2.44□□□□□ -2.02
TCF4-215ENST00000562638 UTP20O75691 2785 aaKnown RBP2.44□□□□□ -2.02
TCF4-215ENST00000562638 CSPG4Q6UVK1 2322 aa2.43□□□□□ -2.02
TCF4-215ENST00000562638 SPINK6Q6UWN8 80 aa2.43□□□□□ -2.02
TCF4-215ENST00000562638 UBE2DNLQ8IWF7 75 aa2.43□□□□□ -2.02
TCF4-215ENST00000562638 FRAS1Q86XX4 4008 aa2.43□□□□□ -2.02
TCF4-215ENST00000562638 F8P00451 2351 aa2.43□□□□□ -2.02
TCF4-215ENST00000562638 MUC6Q6W4X9 2439 aa2.42□□□□□ -2.02
TCF4-215ENST00000562638 DNAH11Q96DT5 4516 aa2.42□□□□□ -2.02
TCF4-215ENST00000562638 FN1P02751 2386 aaKnown RBP2.41□□□□□ -2.02
TCF4-215ENST00000562638 DEFB4AO15263 64 aa2.41□□□□□ -2.02
TCF4-215ENST00000562638 HTN3P15516 51 aa2.41□□□□□ -2.02
TCF4-215ENST00000562638 TLN2Q9Y4G6 2542 aa2.41□□□□□ -2.02
TCF4-215ENST00000562638 NAV2Q8IVL1 2488 aa2.41□□□□□ -2.02
TCF4-215ENST00000562638 NIPBLQ6KC79 2804 aaeCLIP2.41□□□□□ -2.02
TCF4-215ENST00000562638 DEFB135Q30KP9 77 aa2.4□□□□□ -2.03
TCF4-215ENST00000562638 LCE1AQ5T7P2 110 aa2.4□□□□□ -2.03
TCF4-215ENST00000562638 APLNQ9ULZ1 77 aa2.4□□□□□ -2.03
TCF4-215ENST00000562638 JMJD1CQ15652 2540 aa2.39□□□□□ -2.03
TCF4-215ENST00000562638 CEP290O15078 2479 aa2.39□□□□□ -2.03
TCF4-215ENST00000562638 A0A0D9SG42 100 aa2.39□□□□□ -2.03
TCF4-215ENST00000562638 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
TCF4-215ENST00000562638 ANK3Q12955 4377 aaKnown RBP2.39□□□□□ -2.03
TCF4-215ENST00000562638 CCDC168Q8NDH2 2452 aa2.39□□□□□ -2.03
TCF4-215ENST00000562638 BAHCC1Q9P281 2608 aa2.38□□□□□ -2.03
TCF4-215ENST00000562638 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
TCF4-215ENST00000562638 PTPN13Q12923 2485 aa2.38□□□□□ -2.03
TCF4-215ENST00000562638 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
TCF4-215ENST00000562638 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
TCF4-215ENST00000562638 ZNF462Q96JM2 2506 aa2.38□□□□□ -2.03
TCF4-215ENST00000562638 USP9XQ93008 2570 aaPredicted RBP2.38□□□□□ -2.03
TCF4-215ENST00000562638 KRTAP10-7P60409 375 aaPredicted RBP2.37□□□□□ -2.03
TCF4-215ENST00000562638 SVEP1Q4LDE5 3571 aa2.37□□□□□ -2.03
TCF4-215ENST00000562638 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
TCF4-215ENST00000562638 ATRXP46100 2492 aa2.36□□□□□ -2.03
TCF4-215ENST00000562638 NBEAL2Q6ZNJ1 2754 aa2.36□□□□□ -2.03
TCF4-215ENST00000562638 FAM208BQ5VWN6 2430 aa2.35□□□□□ -2.03
TCF4-215ENST00000562638 ZFYVE26Q68DK2 2539 aa2.35□□□□□ -2.03
TCF4-215ENST00000562638 OTOGLQ3ZCN5 2332 aa2.35□□□□□ -2.03
TCF4-215ENST00000562638 HECTD1Q9ULT8 2610 aa2.35□□□□□ -2.03
TCF4-215ENST00000562638 GCN1Q92616 2671 aaKnown RBP2.35□□□□□ -2.03
TCF4-215ENST00000562638 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.04
TCF4-215ENST00000562638 TENM4Q6N022 2769 aa2.33□□□□□ -2.04
TCF4-215ENST00000562638 SONP18583 2426 aaKnown RBP2.33□□□□□ -2.04
TCF4-215ENST00000562638 EYSQ5T1H1 3165 aa2.33□□□□□ -2.04
TCF4-215ENST00000562638 ANK2Q01484 3957 aa2.33□□□□□ -2.04
TCF4-215ENST00000562638 MUC3AQ02505 3323 aa2.33□□□□□ -2.04
TCF4-215ENST00000562638 DYNC2H1Q8NCM8 4307 aaKnown RBP2.32□□□□□ -2.04
TCF4-215ENST00000562638 COL6A5A8TX70 2615 aa2.32□□□□□ -2.04
TCF4-215ENST00000562638 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
TCF4-215ENST00000562638 MTORP42345 2549 aa2.31□□□□□ -2.04
TCF4-215ENST00000562638 UNC79Q9P2D8 2635 aa2.31□□□□□ -2.04
TCF4-215ENST00000562638 MXRA5Q9NR99 2828 aa2.3□□□□□ -2.04
TCF4-215ENST00000562638 LYSTQ99698 3801 aa2.3□□□□□ -2.04
TCF4-215ENST00000562638 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
TCF4-215ENST00000562638 M0QZ58 72 aa2.29□□□□□ -2.04
TCF4-215ENST00000562638 KRTAP1-5Q9BYS1 174 aa2.29□□□□□ -2.04
TCF4-215ENST00000562638 ITPR3Q14573 2671 aa2.29□□□□□ -2.04
TCF4-215ENST00000562638 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
TCF4-215ENST00000562638 A0A1B0GVY2 172 aa2.28□□□□□ -2.04
TCF4-215ENST00000562638 DNAH10Q8IVF4 4471 aa2.28□□□□□ -2.04
TCF4-215ENST00000562638 PDZD2O15018 2839 aa2.28□□□□□ -2.04
TCF4-215ENST00000562638 ANKRD11Q6UB99 2663 aaPredicted RBP2.28□□□□□ -2.04
TCF4-215ENST00000562638 DNAH9Q9NYC9 4486 aa2.28□□□□□ -2.05
TCF4-215ENST00000562638 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
TCF4-215ENST00000562638 DOPEY1Q5JWR5 2465 aa2.27□□□□□ -2.05
TCF4-215ENST00000562638 DNAH2Q9P225 4427 aa2.27□□□□□ -2.05
TCF4-215ENST00000562638 MAPK1IP1LQ8NDC0 245 aa2.27□□□□□ -2.05
TCF4-215ENST00000562638 HIVEP1P15822 2718 aa2.27□□□□□ -2.05
TCF4-215ENST00000562638 NBEAL1Q6ZS30 2694 aa2.27□□□□□ -2.05
TCF4-215ENST00000562638 SETD2Q9BYW2 2564 aaPredicted RBP2.27□□□□□ -2.05
TCF4-215ENST00000562638 CHD8Q9HCK8 2581 aa2.27□□□□□ -2.05
TCF4-215ENST00000562638 Q5VSD8 79 aa2.26□□□□□ -2.05
TCF4-215ENST00000562638 CFAP46Q8IYW2 2715 aa2.26□□□□□ -2.05
TCF4-215ENST00000562638 HELZ2Q9BYK8 2649 aaKnown RBP2.26□□□□□ -2.05
TCF4-215ENST00000562638 MYO9AB2RTY4 2548 aa2.26□□□□□ -2.05
TCF4-215ENST00000562638 CENPEQ02224 2701 aa2.26□□□□□ -2.05
TCF4-215ENST00000562638 DNAH7Q8WXX0 4024 aa2.25□□□□□ -2.05
TCF4-215ENST00000562638 TGP01266 2768 aa2.25□□□□□ -2.05
TCF4-215ENST00000562638 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
TCF4-215ENST00000562638 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
TCF4-215ENST00000562638 COL7A1Q02388 2944 aa2.25□□□□□ -2.05
TCF4-215ENST00000562638 CUBNO60494 3623 aa2.24□□□□□ -2.05
TCF4-215ENST00000562638 CEP295Q9C0D2 2601 aa2.24□□□□□ -2.05
TCF4-215ENST00000562638 CSMD2Q7Z408 3487 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms